RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 SNX29Q8TEQ0 813 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 SLC5A5Q92911 643 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 CALML4Q96GE6 196 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 CDK5RAP3Q96JB5 506 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 FAM20AQ96MK3 541 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 ZNF577Q9BSK1 485 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 CCSER1Q9C0I3 900 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 ADD3Q9UEY8 706 aaKnown RBP10.51□□□□□ -0.73
TPM3-218ENST00000505010 SERTAD1Q9UHV2 236 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 HOOK1Q9UJC3 728 aaKnown RBP10.51□□□□□ -0.73
TPM3-218ENST00000505010 GJD2Q9UKL4 321 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 PCDHA12Q9UN75 941 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 UBIAD1Q9Y5Z9 338 aa10.51□□□□□ -0.73
TPM3-218ENST00000505010 MEIS1O00470 390 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 CHMP2AO43633 222 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 GAS7O60861 476 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 PGK2P07205 417 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 NR3C2P08235 984 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 ARP10275 920 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 FCER1AP12319 257 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 ITGB5P18084 799 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 PLCG1P19174 1290 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 ALDH5A1P51649 535 aaPredicted RBP10.5□□□□□ -0.73
TPM3-218ENST00000505010 MTMR1Q13613 665 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 PDIA5Q14554 519 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 GSE1Q14687 1217 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 E2F4Q16254 413 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 LRRC26Q2I0M4 334 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 RRAGBQ5VZM2 374 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 KRT79Q5XKE5 535 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 LRSAM1Q6UWE0 723 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 RBM43Q6ZSC3 357 aaKnown RBP10.5□□□□□ -0.73
TPM3-218ENST00000505010 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.5□□□□□ -0.73
TPM3-218ENST00000505010 NLRX1Q86UT6 975 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 FAM133AQ8N9E0 248 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 IQUBQ8NA54 791 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 DNERQ8NFT8 737 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 CCDC34Q96HJ3 373 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 PLIN2Q99541 437 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 MPHOSPH6Q99547 160 aaKnown RBP10.5□□□□□ -0.73
TPM3-218ENST00000505010 TEKT3Q9BXF9 490 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 WDR11Q9BZH6 1224 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 TSPY26PQ9H489 355 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 AGO4Q9HCK5 861 aaKnown RBP10.5□□□□□ -0.73
TPM3-218ENST00000505010 JADE2Q9NQC1 790 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 DISC1Q9NRI5 854 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 USP25Q9UHP3 1055 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 VAV3Q9UKW4 847 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 ASTN1O14525 1302 aa10.5□□□□□ -0.73
TPM3-218ENST00000505010 TTC28Q96AY4 2481 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 SOWAHBA6NEL2 793 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 DDX39AO00148 427 aaKnown RBP10.49□□□□□ -0.73
TPM3-218ENST00000505010 IPO5O00410 1097 aaKnown RBP10.49□□□□□ -0.73
TPM3-218ENST00000505010 COL6A1P12109 1028 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 PRKAR2AP13861 404 aaKnown RBP10.49□□□□□ -0.73
TPM3-218ENST00000505010 CYP2B6P20813 491 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 CCT6AP40227 531 aaKnown RBP10.49□□□□□ -0.73
TPM3-218ENST00000505010 PDE4DQ08499 809 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 PNOCQ13519 176 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 POSTNQ15063 836 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 HAUS3Q68CZ6 603 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 KANK3Q6NY19 840 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 PDXDC2PQ6P474 469 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 SASS6Q6UVJ0 657 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 VSIG10LQ86VR7 867 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 GRAMD1CQ8IYS0 662 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 ERMNQ8TAM6 284 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 TRIB2Q92519 343 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 ERCC4Q92889 916 aaPredicted RBP10.49□□□□□ -0.73
TPM3-218ENST00000505010 IWS1Q96ST2 819 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 MMTAG2Q9BU76 263 aaKnown RBP10.49□□□□□ -0.73
TPM3-218ENST00000505010 SEMA6BQ9H3T3 888 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 KCNH7Q9NS40 1196 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 IVNS1ABPQ9Y6Y0 642 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 KDM3AQ9Y4C1 1321 aa10.49□□□□□ -0.73
TPM3-218ENST00000505010 B4DLN1 442 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 PSMD10O75832 226 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 STAM2O75886 525 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 SLFN14P0C7P3 912 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 CCDC192P0DO97 292 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 AFMP43652 599 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 TYRO3Q06418 890 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 SPIRE1Q08AE8 756 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 GRB10Q13322 594 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 STXBP2Q15833 593 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 GNPTABQ3T906 1256 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 MAP3K21Q5TCX8 1036 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 GPRASP2Q96D09 838 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 PNMA5Q96PV4 448 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 RIT2Q99578 217 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 NUDT12Q9BQG2 462 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 UNC45AQ9H3U1 944 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 PRKAG2Q9UGJ0 569 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 TCEAL9Q9UHQ7 104 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 ARID2Q68CP9 1835 aa10.48□□□□□ -0.73
TPM3-218ENST00000505010 DNAJC25-GNG10A0A024R161 153 aa10.47□□□□□ -0.73
TPM3-218ENST00000505010 POTEB3A0JP26 581 aa10.47□□□□□ -0.73
TPM3-218ENST00000505010 GOLGA6L3A6NEY3 463 aa10.47□□□□□ -0.73
TPM3-218ENST00000505010 SLC26A4O43511 780 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms