RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 WNT7AO00755 349 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 TBX3O15119 743 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 DHX15O43143 795 aaKnown RBP13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 SLC37A4O43826 429 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 PPFIA4O75335 1185 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 ASGR1P07306 291 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 MMP3P08254 477 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 TOB1P50616 345 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 ACLYP53396 1101 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 ORC2Q13416 577 aaPredicted RBP13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 DGKDQ16760 1214 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 HSDL1Q3SXM5 330 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 BRAPQ7Z569 592 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 NECAB2Q7Z6G3 386 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 SPRYD3Q8NCJ5 442 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 ETNPPLQ8TBG4 499 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 PAWRQ96IZ0 340 aaKnown RBP13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 FAM20AQ96MK3 541 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 RIT2Q99578 217 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 KCNMB3Q9NPA1 279 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 POLR3EQ9NVU0 708 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 PKD2L1Q9P0L9 805 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 SLC9A2Q9UBY0 812 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 MTMR6Q9Y217 621 aa13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 MKI67P46013 3256 aaKnown RBP13.48□□□□□ -0.25
PDLIM5-208ENST00000504489 PDE4DIPQ5VU43 2346 aa13.47□□□□□ -0.25
PDLIM5-208ENST00000504489 CABYRO75952 493 aa13.47□□□□□ -0.25
PDLIM5-208ENST00000504489 PURAQ00577 322 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-208ENST00000504489 RILPL1Q5EBL4 403 aa13.47□□□□□ -0.25
PDLIM5-208ENST00000504489 TTC38Q5R3I4 469 aa13.47□□□□□ -0.25
PDLIM5-208ENST00000504489 DIS3LQ8TF46 1054 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-208ENST00000504489 GPR20Q99678 358 aa13.47□□□□□ -0.25
PDLIM5-208ENST00000504489 C11orf49Q9H6J7 331 aa13.47□□□□□ -0.25
PDLIM5-208ENST00000504489 JPH1Q9HDC5 661 aaPredicted RBP13.47□□□□□ -0.25
PDLIM5-208ENST00000504489 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.47□□□□□ -0.25
PDLIM5-208ENST00000504489 ARID2Q68CP9 1835 aa13.47□□□□□ -0.25
PDLIM5-208ENST00000504489 ELP1O95163 1332 aa13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 A0A1W2PQ45 241 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 A0A1W2PQY0 241 aa13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 NOP56O00567 594 aaKnown RBP13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 SORBS3O60504 671 aa13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 PSMD10O75832 226 aa13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 ATG7O95352 703 aa13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 BAG4O95429 457 aaKnown RBP13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 MYL3P08590 195 aa13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 ATP2B1P20020 1258 aa13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 ANP32AP39687 249 aaKnown RBP13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 RGS19P49795 217 aa13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 LRCH2Q5VUJ6 765 aa13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 ZNF746Q6NUN9 644 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 CXCL17Q6UXB2 119 aa13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 SEPT1Q8WYJ6 367 aa13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 HAS1Q92839 578 aa13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 GLT1D1Q96MS3 346 aa13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 MTG1Q9BT17 334 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 SENP6Q9GZR1 1112 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 ZSCAN16Q9H4T2 348 aaPredicted RBP13.46□□□□□ -0.25
PDLIM5-208ENST00000504489 GSTTP1A0A1W2PQM5 241 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 NEMFO60524 1076 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 GAS7O60861 476 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 CCNE2O96020 404 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 MCM7P33993 719 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 ACTR2P61160 394 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 KRT76Q01546 638 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 RESTQ13127 1097 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 ZNF174Q15697 407 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 CALCRLQ16602 461 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 FERMT3Q86UX7 667 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 SLFN12Q8IYM2 578 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 EFCAB3Q8N7B9 438 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 FERMT2Q96AC1 680 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 MTMR9Q96QG7 549 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 UIMC1Q96RL1 719 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 TEKT3Q9BXF9 490 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 TCEAL9Q9UHQ7 104 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 TELO2Q9Y4R8 837 aa13.45□□□□□ -0.26
PDLIM5-208ENST00000504489 DDX39AO00148 427 aaKnown RBP13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 MARCH6O60337 910 aa13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 SP4Q02446 784 aa13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 B3GNT9Q6UX72 402 aa13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 SLC39A5Q6ZMH5 540 aa13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 SMAP1Q8IYB5 467 aaPredicted RBP13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 C4orf32Q8N8J7 132 aa13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 KAT2BQ92831 832 aa13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 C16orf70Q9BSU1 422 aa13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 SEZ6LQ9BYH1 1024 aa13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 TMEM60Q9H2L4 133 aa13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 STARD7Q9NQZ5 370 aa13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 PCDHB6Q9Y5E3 794 aa13.44□□□□□ -0.26
PDLIM5-208ENST00000504489 EMSYQ7Z589 1322 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 IGKV6D-21A0A0A0MT36 114 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 HAS3O00219 553 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 LGR5O75473 907 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 F2P00734 622 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 LGALS2P05162 132 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 ZSCAN22P10073 491 aaPredicted RBP13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 SFNP31947 248 aa13.43□□□□□ -0.26
PDLIM5-208ENST00000504489 TCF7P36402 384 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms