RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 CALD1Q05682 793 aaKnown RBP6.62□□□□□ -1.35
HMGCR-204ENST00000504466 GNPTABQ3T906 1256 aa6.62□□□□□ -1.35
HMGCR-204ENST00000504466 MTERF2Q49AM1 385 aa6.62□□□□□ -1.35
HMGCR-204ENST00000504466 EEPD1Q7L9B9 569 aa6.62□□□□□ -1.35
HMGCR-204ENST00000504466 NLGN1Q8N2Q7 840 aa6.62□□□□□ -1.35
HMGCR-204ENST00000504466 C8orf58Q8NAV2 365 aa6.62□□□□□ -1.35
HMGCR-204ENST00000504466 ST13P5Q8NFI4 369 aaPredicted RBP6.62□□□□□ -1.35
HMGCR-204ENST00000504466 PANK1Q8TE04 598 aa6.62□□□□□ -1.35
HMGCR-204ENST00000504466 TCTN2Q96GX1 697 aa6.62□□□□□ -1.35
HMGCR-204ENST00000504466 MAP6Q96JE9 813 aa6.62□□□□□ -1.35
HMGCR-204ENST00000504466 CCDC136Q96JN2 1154 aa6.62□□□□□ -1.35
HMGCR-204ENST00000504466 SLC6A18Q96N87 628 aa6.62□□□□□ -1.35
HMGCR-204ENST00000504466 DNAJC7Q99615 494 aa6.62□□□□□ -1.35
HMGCR-204ENST00000504466 ASCC2Q9H1I8 757 aaPredicted RBP6.62□□□□□ -1.35
HMGCR-204ENST00000504466 SUCOQ9UBS9 1254 aaKnown RBP6.62□□□□□ -1.35
HMGCR-204ENST00000504466 PCDHB10Q9UN67 800 aa6.62□□□□□ -1.35
HMGCR-204ENST00000504466 VIRMAQ69YN4 1812 aaKnown RBP6.62□□□□□ -1.35
HMGCR-204ENST00000504466 ABCC6O95255 1503 aa6.61□□□□□ -1.35
HMGCR-204ENST00000504466 CPDO75976 1380 aa6.61□□□□□ -1.35
HMGCR-204ENST00000504466 KDM2BQ8NHM5 1336 aa6.61□□□□□ -1.35
HMGCR-204ENST00000504466 CLEC3AO75596 197 aa6.61□□□□□ -1.35
HMGCR-204ENST00000504466 PDE6BP35913 854 aa6.61□□□□□ -1.35
HMGCR-204ENST00000504466 PMS1P54277 932 aaKnown RBP6.61□□□□□ -1.35
HMGCR-204ENST00000504466 ALDH1L2Q3SY69 923 aa6.61□□□□□ -1.35
HMGCR-204ENST00000504466 MRM1Q6IN84 353 aaKnown RBP6.61□□□□□ -1.35
HMGCR-204ENST00000504466 KIAA1211LQ6NV74 962 aa6.61□□□□□ -1.35
HMGCR-204ENST00000504466 TMEM192Q8IY95 271 aa6.61□□□□□ -1.35
HMGCR-204ENST00000504466 IL17REQ8NFR9 667 aa6.61□□□□□ -1.35
HMGCR-204ENST00000504466 KLHL6Q8WZ60 621 aa6.61□□□□□ -1.35
HMGCR-204ENST00000504466 C20orf173Q96LM9 149 aa6.61□□□□□ -1.35
HMGCR-204ENST00000504466 ABCA3Q99758 1704 aa6.61□□□□□ -1.35
HMGCR-204ENST00000504466 CEMIPQ8WUJ3 1361 aa6.6□□□□□ -1.35
HMGCR-204ENST00000504466 KIAA0232Q92628 1395 aa6.6□□□□□ -1.35
HMGCR-204ENST00000504466 OR14I1A6ND48 311 aa6.6□□□□□ -1.35
HMGCR-204ENST00000504466 B8ZZF3 427 aa6.6□□□□□ -1.35
HMGCR-204ENST00000504466 HOXA5P20719 270 aa6.6□□□□□ -1.35
HMGCR-204ENST00000504466 KRT24Q2M2I5 525 aa6.6□□□□□ -1.35
HMGCR-204ENST00000504466 TMC3Q7Z5M5 1100 aa6.6□□□□□ -1.35
HMGCR-204ENST00000504466 SMARCC1Q92922 1105 aaPredicted RBP6.6□□□□□ -1.35
HMGCR-204ENST00000504466 ZNF669Q96BR6 464 aaPredicted RBP6.6□□□□□ -1.35
HMGCR-204ENST00000504466 RNPC3Q96LT9 517 aaKnown RBP6.6□□□□□ -1.35
HMGCR-204ENST00000504466 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
HMGCR-204ENST00000504466 PARD6AQ9NPB6 346 aa6.6□□□□□ -1.35
HMGCR-204ENST00000504466 TCFL5Q9UL49 500 aa6.6□□□□□ -1.35
HMGCR-204ENST00000504466 NOB1Q9ULX3 412 aaKnown RBP6.6□□□□□ -1.35
HMGCR-204ENST00000504466 LAS1LQ9Y4W2 734 aaKnown RBP6.6□□□□□ -1.35
HMGCR-204ENST00000504466 ADAMTS7Q9UKP4 1686 aa6.6□□□□□ -1.35
HMGCR-204ENST00000504466 USP2O75604 605 aaPredicted RBP6.59□□□□□ -1.35
HMGCR-204ENST00000504466 TRIM27P14373 513 aa6.59□□□□□ -1.35
HMGCR-204ENST00000504466 RPL10P27635 214 aaKnown RBP6.59□□□□□ -1.35
HMGCR-204ENST00000504466 PCBP3P57721 371 aaKnown RBP6.59□□□□□ -1.35
HMGCR-204ENST00000504466 YBX1P67809 324 aaKnown RBP6.59□□□□□ -1.35
HMGCR-204ENST00000504466 TWISTNBQ3B726 338 aaPredicted RBP6.59□□□□□ -1.35
HMGCR-204ENST00000504466 ZNF385BQ569K4 471 aa6.59□□□□□ -1.35
HMGCR-204ENST00000504466 ZKSCAN2Q63HK3 967 aa6.59□□□□□ -1.35
HMGCR-204ENST00000504466 LILRB2Q8N423 598 aa6.59□□□□□ -1.35
HMGCR-204ENST00000504466 SH3TC2Q8TF17 1288 aa6.59□□□□□ -1.35
HMGCR-204ENST00000504466 FRAT1Q92837 279 aaPredicted RBP6.59□□□□□ -1.35
HMGCR-204ENST00000504466 HHIPL1Q96JK4 782 aa6.59□□□□□ -1.35
HMGCR-204ENST00000504466 KCNC2Q96PR1 638 aa6.59□□□□□ -1.35
HMGCR-204ENST00000504466 SGPP1Q9BX95 441 aa6.59□□□□□ -1.35
HMGCR-204ENST00000504466 FOXP3Q9BZS1 431 aa6.59□□□□□ -1.35
HMGCR-204ENST00000504466 EPN3Q9H201 632 aa6.59□□□□□ -1.35
HMGCR-204ENST00000504466 SMC4Q9NTJ3 1288 aa6.59□□□□□ -1.35
HMGCR-204ENST00000504466 MIS18AQ9NYP9 233 aa6.59□□□□□ -1.35
HMGCR-204ENST00000504466 MBD1Q9UIS9 605 aaPredicted RBP6.59□□□□□ -1.35
HMGCR-204ENST00000504466 CNOT6Q9ULM6 557 aaKnown RBP6.59□□□□□ -1.35
HMGCR-204ENST00000504466 MAP3K5Q99683 1374 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 ELL2O00472 640 aaPredicted RBP6.58□□□□□ -1.36
HMGCR-204ENST00000504466 ENPP3O14638 875 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 SIGLEC6O43699 453 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 SUSD5O60279 629 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 CLSTN1O94985 981 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 IGHDP01880 384 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 NAT2P11245 290 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 PNLIPP16233 465 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 HSD3B2P26439 372 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 GALK1P51570 392 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 ZNF143P52747 638 aaPredicted RBP6.58□□□□□ -1.36
HMGCR-204ENST00000504466 CTSWP56202 376 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 SNW1Q13573 536 aaKnown RBP6.58□□□□□ -1.36
HMGCR-204ENST00000504466 MVPQ14764 893 aaKnown RBP6.58□□□□□ -1.36
HMGCR-204ENST00000504466 CHRNA2Q15822 529 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 TDRD10Q5VZ19 366 aaKnown RBP6.58□□□□□ -1.36
HMGCR-204ENST00000504466 ATF7IPQ6VMQ6 1270 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 PPFIBP1Q86W92 1011 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 ARHGAP45Q92619 1136 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 BABAM1Q9NWV8 329 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 PFDN2Q9UHV9 154 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 ZMYM5Q9UJ78 669 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 KCTD3Q9Y597 815 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 SIPA1L3O60292 1781 aaPredicted RBP6.58□□□□□ -1.36
HMGCR-204ENST00000504466 KDM3BQ7LBC6 1761 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 RGS12O14924 1447 aa6.58□□□□□ -1.36
HMGCR-204ENST00000504466 C9IYK1 514 aa6.57□□□□□ -1.36
HMGCR-204ENST00000504466 TCERG1O14776 1098 aaKnown RBP6.57□□□□□ -1.36
HMGCR-204ENST00000504466 PRAMEF1O95521 474 aa6.57□□□□□ -1.36
HMGCR-204ENST00000504466 TP53P04637 393 aaPredicted RBP6.57□□□□□ -1.36
HMGCR-204ENST00000504466 ERVFRD-1P60508 538 aa6.57□□□□□ -1.36
HMGCR-204ENST00000504466 SSRP1Q08945 709 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms