RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 SLC9A7Q96T83 725 aa16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 MXRA8Q9BRK3 442 aa16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 ANO3Q9BYT9 981 aa16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 ZMYND12Q9H0C1 365 aa16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 KCNH7Q9NS40 1196 aa16.03■□□□□ 0.16
PDLIM7-211ENST00000504318 WDR81Q562E7 1941 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 IGLV3-22A0A075B6J6 115 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 C17orf102A2RUQ5 167 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 ZBBXA8MT70 800 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 NOP56O00567 594 aaKnown RBP16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 MAFGO15525 162 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 LGR5O75473 907 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 PARNO95453 639 aaKnown RBP16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 ARP10275 920 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 SCG2P13521 617 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 FOSL2P15408 326 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 TCF7P36402 384 aaPredicted RBP16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 ADCY7P51828 1080 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 DEFB103AP81534 67 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 AP3B2Q13367 1082 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 CNKSR3Q6P9H4 555 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 RUFY3Q7L099 469 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 GIMAP8Q8ND71 665 aaPredicted RBP16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 LMBR1Q8WVP7 490 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 CDHR1Q96JP9 859 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 PRDM12Q9H4Q4 367 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 SETD4Q9NVD3 440 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 MSRAQ9UJ68 235 aa16.02■□□□□ 0.16
PDLIM7-211ENST00000504318 NFASCO94856 1347 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 EMSYQ7Z589 1322 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 CUL9Q8IWT3 2517 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 MBLAC1A4D2B0 266 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 EPOPA6NHQ4 379 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 FAM86B1E9PN63 330 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 MEIS1O00470 390 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 FOSP01100 380 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 FAM86B2P0C5J1 330 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 IFNAR1P17181 557 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 CEP55Q53EZ4 464 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 MARCH8Q5T0T0 291 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 SPRED2Q7Z698 418 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 HERC6Q8IVU3 1022 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 SEPT1Q8WYJ6 367 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 ATP6V0A1Q93050 837 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 PHKBQ93100 1093 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 TM6SF1Q9BZW5 370 aa16.01■□□□□ 0.15
PDLIM7-211ENST00000504318 COL4A4P53420 1690 aaPredicted RBP16■□□□□ 0.15
PDLIM7-211ENST00000504318 CCDC196A0A1B0GTZ2 297 aa16■□□□□ 0.15
PDLIM7-211ENST00000504318 DHX15O43143 795 aaKnown RBP16■□□□□ 0.15
PDLIM7-211ENST00000504318 ATG7O95352 703 aa16■□□□□ 0.15
PDLIM7-211ENST00000504318 CA3P07451 260 aa16■□□□□ 0.15
PDLIM7-211ENST00000504318 CYP3A4P08684 503 aa16■□□□□ 0.15
PDLIM7-211ENST00000504318 ACTN1P12814 892 aa16■□□□□ 0.15
PDLIM7-211ENST00000504318 PSMA5P28066 241 aa16■□□□□ 0.15
PDLIM7-211ENST00000504318 SP4Q02446 784 aa16■□□□□ 0.15
PDLIM7-211ENST00000504318 FAM26DQ5JW98 314 aa16■□□□□ 0.15
PDLIM7-211ENST00000504318 UTP14CQ5TAP6 766 aaKnown RBP16■□□□□ 0.15
PDLIM7-211ENST00000504318 TMCO2Q7Z6W1 182 aaPredicted RBP16■□□□□ 0.15
PDLIM7-211ENST00000504318 RPAINQ86UA6 219 aa16■□□□□ 0.15
PDLIM7-211ENST00000504318 PHF6Q8IWS0 365 aaKnown RBP eCLIP16■□□□□ 0.15
PDLIM7-211ENST00000504318 IL17RAQ96F46 866 aa16■□□□□ 0.15
PDLIM7-211ENST00000504318 RNF26Q9BY78 433 aaPredicted RBP16■□□□□ 0.15
PDLIM7-211ENST00000504318 FTOQ9C0B1 505 aaKnown RBP eCLIP16■□□□□ 0.15
PDLIM7-211ENST00000504318 NCOA5Q9HCD5 579 aaKnown RBP16■□□□□ 0.15
PDLIM7-211ENST00000504318 AGO4Q9HCK5 861 aaKnown RBP16■□□□□ 0.15
PDLIM7-211ENST00000504318 PKD2L1Q9P0L9 805 aa16■□□□□ 0.15
PDLIM7-211ENST00000504318 IGKV6D-21A0A0A0MT36 114 aa15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 PPFIA3O75145 1194 aa15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 CAND2O75155 1236 aa15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 CCNE2O96020 404 aa15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 THPOP40225 353 aa15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 ARHGAP4P98171 946 aa15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 MGAT3Q09327 533 aa15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 NPY5RQ15761 445 aa15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 PLEKHG4Q58EX7 1191 aa15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 RUFY4Q6ZNE9 571 aa15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 NIPA1Q7RTP0 329 aa15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 GLT8D2Q9H1C3 349 aa15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 JPH1Q9HDC5 661 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 SLC9A2Q9UBY0 812 aa15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 ZNF215Q9UL58 517 aaPredicted RBP15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 PRRC2BQ5JSZ5 2229 aaKnown RBP15.99■□□□□ 0.15
PDLIM7-211ENST00000504318 NRCAMQ92823 1304 aa15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 LOXHD1Q8IVV2 1947 aa15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 LCHNA4D1U4 455 aa15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 RSPH10B2B2RC85 870 aa15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 RSPH10BP0C881 870 aa15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 TAP1Q03518 808 aa15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 JAKMIP3Q5VZ66 844 aa15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 DBF4BQ8NFT6 615 aa15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 LENG9Q96B70 501 aa15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 UPF3BQ9BZI7 483 aaKnown RBP15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 EHMT1Q9H9B1 1298 aa15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 SLC28A3Q9HAS3 691 aa15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 MUC3AQ02505 3323 aa15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 COL4A6Q14031 1691 aa15.98■□□□□ 0.15
PDLIM7-211ENST00000504318 ABHD14A-ACY1A0A1B0GW23 586 aa15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 M0R2N6 131 aa15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 GJB5O95377 273 aa15.97■□□□□ 0.15
PDLIM7-211ENST00000504318 CHRNA1P02708 482 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms