RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 CCDC196A0A1B0GTZ2 297 aa25.21■■□□□ 1.63
LSM6-203ENST00000503982 EFCAB14O75071 495 aa25.21■■□□□ 1.63
LSM6-203ENST00000503982 REC8O95072 547 aa25.21■■□□□ 1.63
LSM6-203ENST00000503982 MARK3P27448 753 aa25.21■■□□□ 1.63
LSM6-203ENST00000503982 CDC27P30260 824 aa25.21■■□□□ 1.63
LSM6-203ENST00000503982 ZNF76P36508 570 aa25.21■■□□□ 1.63
LSM6-203ENST00000503982 DEFB103AP81534 67 aa25.21■■□□□ 1.63
LSM6-203ENST00000503982 A0A0C4DFX4 3053 aa25.21■■□□□ 1.63
LSM6-203ENST00000503982 MICAL3Q7RTP6 2002 aa25.2■■□□□ 1.63
LSM6-203ENST00000503982 STXBP3O00186 592 aa25.2■■□□□ 1.62
LSM6-203ENST00000503982 RFXAPO00287 272 aa25.2■■□□□ 1.62
LSM6-203ENST00000503982 GTPBP6O43824 516 aaPredicted RBP25.2■■□□□ 1.62
LSM6-203ENST00000503982 FOSP01100 380 aaPredicted RBP25.2■■□□□ 1.62
LSM6-203ENST00000503982 HSPA4P34932 840 aa25.2■■□□□ 1.62
LSM6-203ENST00000503982 ADD1P35611 737 aaKnown RBP25.2■■□□□ 1.62
LSM6-203ENST00000503982 ANO3Q9BYT9 981 aa25.2■■□□□ 1.62
LSM6-203ENST00000503982 GLT8D2Q9H1C3 349 aa25.2■■□□□ 1.62
LSM6-203ENST00000503982 PRDM6Q9NQX0 595 aa25.2■■□□□ 1.62
LSM6-203ENST00000503982 CHD9Q3L8U1 2897 aa25.2■■□□□ 1.62
LSM6-203ENST00000503982 AKAP17AQ02040 695 aaKnown RBP25.19■■□□□ 1.62
LSM6-203ENST00000503982 TCTN1Q2MV58 587 aa25.19■■□□□ 1.62
LSM6-203ENST00000503982 TYW1BQ6NUM6 668 aa25.19■■□□□ 1.62
LSM6-203ENST00000503982 TRAF7Q6Q0C0 670 aa25.19■■□□□ 1.62
LSM6-203ENST00000503982 MXRA8Q9BRK3 442 aa25.19■■□□□ 1.62
LSM6-203ENST00000503982 SDF4Q9BRK5 362 aa25.19■■□□□ 1.62
LSM6-203ENST00000503982 TMEM260Q9NX78 707 aa25.19■■□□□ 1.62
LSM6-203ENST00000503982 BARHL2Q9NY43 387 aa25.19■■□□□ 1.62
LSM6-203ENST00000503982 RBAK-RBAKDNI3L0D1 243 aa25.18■■□□□ 1.62
LSM6-203ENST00000503982 MAFGO15525 162 aa25.18■■□□□ 1.62
LSM6-203ENST00000503982 PSMA5P28066 241 aa25.18■■□□□ 1.62
LSM6-203ENST00000503982 RCAN1P53805 252 aa25.18■■□□□ 1.62
LSM6-203ENST00000503982 PPFIA1Q13136 1202 aa25.18■■□□□ 1.62
LSM6-203ENST00000503982 MBTPS1Q14703 1052 aa25.18■■□□□ 1.62
LSM6-203ENST00000503982 SKIV2LQ15477 1246 aaKnown RBP25.18■■□□□ 1.62
LSM6-203ENST00000503982 MYOCDQ8IZQ8 938 aa25.18■■□□□ 1.62
LSM6-203ENST00000503982 DBF4BQ8NFT6 615 aa25.18■■□□□ 1.62
LSM6-203ENST00000503982 LMBR1Q8WVP7 490 aa25.18■■□□□ 1.62
LSM6-203ENST00000503982 TSPYL2Q9H2G4 693 aaPredicted RBP25.18■■□□□ 1.62
LSM6-203ENST00000503982 AZI2Q9H6S1 392 aa25.18■■□□□ 1.62
LSM6-203ENST00000503982 JPH1Q9HDC5 661 aaPredicted RBP25.18■■□□□ 1.62
LSM6-203ENST00000503982 ERAP1Q9NZ08 941 aa25.18■■□□□ 1.62
LSM6-203ENST00000503982 NRCAMQ92823 1304 aa25.17■■□□□ 1.62
LSM6-203ENST00000503982 GSTTP1A0A1W2PQM5 241 aa25.17■■□□□ 1.62
LSM6-203ENST00000503982 AMHP03971 560 aa25.17■■□□□ 1.62
LSM6-203ENST00000503982 TAP1Q03518 808 aa25.17■■□□□ 1.62
LSM6-203ENST00000503982 FUT2Q10981 343 aa25.17■■□□□ 1.62
LSM6-203ENST00000503982 JAKMIP3Q5VZ66 844 aa25.17■■□□□ 1.62
LSM6-203ENST00000503982 SEPT8Q92599 483 aa25.17■■□□□ 1.62
LSM6-203ENST00000503982 SMARCAD1Q9H4L7 1026 aa25.17■■□□□ 1.62
LSM6-203ENST00000503982 FAM217BQ9NTX9 383 aaPredicted RBP25.17■■□□□ 1.62
LSM6-203ENST00000503982 SLC9A2Q9UBY0 812 aa25.17■■□□□ 1.62
LSM6-203ENST00000503982 PRUNE2Q8WUY3 3088 aa25.17■■□□□ 1.62
LSM6-203ENST00000503982 CAND2O75155 1236 aa25.16■■□□□ 1.62
LSM6-203ENST00000503982 SCG2P13521 617 aa25.16■■□□□ 1.62
LSM6-203ENST00000503982 RPS6KB1P23443 525 aa25.16■■□□□ 1.62
LSM6-203ENST00000503982 HOXC8P31273 242 aa25.16■■□□□ 1.62
LSM6-203ENST00000503982 IGBP1P78318 339 aa25.16■■□□□ 1.62
LSM6-203ENST00000503982 AP3B2Q13367 1082 aa25.16■■□□□ 1.62
LSM6-203ENST00000503982 RSPH3Q86UC2 560 aa25.16■■□□□ 1.62
LSM6-203ENST00000503982 SYMPKQ92797 1274 aaKnown RBP25.16■■□□□ 1.62
LSM6-203ENST00000503982 KCNB2Q92953 911 aa25.16■■□□□ 1.62
LSM6-203ENST00000503982 KCNH7Q9NS40 1196 aa25.16■■□□□ 1.62
LSM6-203ENST00000503982 THEGQ9P2T0 379 aa25.16■■□□□ 1.62
LSM6-203ENST00000503982 GRIK4Q16099 956 aa25.15■■□□□ 1.62
LSM6-203ENST00000503982 PFKFB3Q16875 520 aaPredicted RBP25.15■■□□□ 1.62
LSM6-203ENST00000503982 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.15■■□□□ 1.62
LSM6-203ENST00000503982 IL27Q8NEV9 243 aa25.15■■□□□ 1.62
LSM6-203ENST00000503982 CYP2W1Q8TAV3 490 aa25.15■■□□□ 1.62
LSM6-203ENST00000503982 CCDC12Q8WUD4 166 aaPredicted RBP25.15■■□□□ 1.62
LSM6-203ENST00000503982 RAD9AQ99638 391 aa25.15■■□□□ 1.62
LSM6-203ENST00000503982 MTUS1Q9ULD2 1270 aa25.15■■□□□ 1.62
LSM6-203ENST00000503982 LCHNA4D1U4 455 aa25.14■■□□□ 1.62
LSM6-203ENST00000503982 ARHGEF15O94989 841 aa25.14■■□□□ 1.62
LSM6-203ENST00000503982 GJB5O95377 273 aa25.14■■□□□ 1.62
LSM6-203ENST00000503982 ARP10275 920 aa25.14■■□□□ 1.62
LSM6-203ENST00000503982 CEP55Q53EZ4 464 aa25.14■■□□□ 1.62
LSM6-203ENST00000503982 TJAP1Q5JTD0 557 aa25.14■■□□□ 1.62
LSM6-203ENST00000503982 C6orf50Q9HD87 102 aa25.14■■□□□ 1.62
LSM6-203ENST00000503982 TRPC6Q9Y210 931 aa25.14■■□□□ 1.62
LSM6-203ENST00000503982 CUL9Q8IWT3 2517 aa25.14■■□□□ 1.61
LSM6-203ENST00000503982 COL4A4P53420 1690 aaPredicted RBP25.13■■□□□ 1.61
LSM6-203ENST00000503982 DDX39AO00148 427 aaKnown RBP25.13■■□□□ 1.61
LSM6-203ENST00000503982 PPFIA3O75145 1194 aa25.13■■□□□ 1.61
LSM6-203ENST00000503982 PLEKHG4Q58EX7 1191 aa25.13■■□□□ 1.61
LSM6-203ENST00000503982 TEX2Q8IWB9 1127 aa25.13■■□□□ 1.61
LSM6-203ENST00000503982 TNPO1Q92973 898 aaKnown RBP25.13■■□□□ 1.61
LSM6-203ENST00000503982 PHKBQ93100 1093 aa25.13■■□□□ 1.61
LSM6-203ENST00000503982 TUBE1Q9UJT0 475 aa25.13■■□□□ 1.61
LSM6-203ENST00000503982 EPOPA6NHQ4 379 aa25.12■■□□□ 1.61
LSM6-203ENST00000503982 UPP2O95045 317 aa25.12■■□□□ 1.61
LSM6-203ENST00000503982 SREBF1P36956 1147 aa25.12■■□□□ 1.61
LSM6-203ENST00000503982 CCT2P78371 535 aaKnown RBP25.12■■□□□ 1.61
LSM6-203ENST00000503982 TAF2Q6P1X5 1199 aa25.12■■□□□ 1.61
LSM6-203ENST00000503982 RUFY4Q6ZNE9 571 aa25.12■■□□□ 1.61
LSM6-203ENST00000503982 SLC26A6Q9BXS9 759 aa25.12■■□□□ 1.61
LSM6-203ENST00000503982 CHD7Q9P2D1 2997 aa25.12■■□□□ 1.61
LSM6-203ENST00000503982 NFASCO94856 1347 aa25.12■■□□□ 1.61
LSM6-203ENST00000503982 ACTR2P61160 394 aa25.11■■□□□ 1.61
LSM6-203ENST00000503982 PLA2G4DQ86XP0 818 aa25.11■■□□□ 1.61
LSM6-203ENST00000503982 AGO4Q9HCK5 861 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms