RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 RRP36Q96EU6 259 aaKnown RBP7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 TMEM87BQ96K49 555 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 LRFN3Q9BTN0 628 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 PLVAPQ9BX97 442 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 RC3H2Q9HBD1 1191 aaKnown RBP7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 RNF216Q9NWF9 866 aaPredicted RBP7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 FAM50BQ9Y247 325 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 HCN4Q9Y3Q4 1203 aa7.04□□□□□ -1.28
LSM3P4-201ENST00000502948 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 PRR33A8MZF0 331 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 LINC00271P0C7V0 271 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 ALADP13716 330 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 KCNA2P16389 499 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 ANTXR2P58335 489 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 ZNF200P98182 395 aaPredicted RBP7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 MGAT3Q09327 533 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 CTC1Q2NKJ3 1217 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 KRT40Q6A162 431 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 CYFIP1Q7L576 1253 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 SPRED2Q7Z698 418 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 RSPH3Q86UC2 560 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 SGMS1Q86VZ5 419 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 HOMER1Q86YM7 354 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 TMEM192Q8IY95 271 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 ZNF654Q8IZM8 581 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 GJD3Q8N144 294 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 CTCFLQ8NI51 663 aaPredicted RBP7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 SMARCC2Q8TAQ2 1214 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 GDPD5Q8WTR4 605 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 PPP1R13LQ8WUF5 828 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 LMBR1Q8WVP7 490 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 SEPT1Q8WYJ6 367 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 P2RX5Q93086 422 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 ZNF689Q96CS4 500 aaPredicted RBP7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 NECAB3Q96P71 396 aaPredicted RBP7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 C17orf80Q9BSJ5 609 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 C11orf84Q9BUA3 381 aaPredicted RBP7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 FTHL17Q9BXU8 183 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 IFIH1Q9BYX4 1025 aaKnown RBP7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 SMARCAD1Q9H4L7 1026 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 NSUN3Q9H649 340 aaKnown RBP7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 EPHX3Q9H6B9 360 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 LY9Q9HBG7 655 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 C11orf16Q9NQ32 467 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 ERAP1Q9NZ08 941 aa7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 SEC63Q9UGP8 760 aaKnown RBP7.03□□□□□ -1.28
LSM3P4-201ENST00000502948 NFASCO94856 1347 aa7.02□□□□□ -1.28
LSM3P4-201ENST00000502948 KDM3AQ9Y4C1 1321 aa7.02□□□□□ -1.28
LSM3P4-201ENST00000502948 KIAA1671Q9BY89 1806 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 POTEB3A0JP26 581 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 FSD2A1L4K1 749 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 RRN3P2A6NIE6 340 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 C19orf67A6NJJ6 358 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 hCG_1984214I3L0E3 225 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 CHRNA1P02708 482 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 PDE4AP27815 886 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 MCM5P33992 734 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 SLC26A2P50443 739 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 RCAN1P53805 252 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 CHMP4BP1P59074 171 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 PTH1RQ03431 593 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 GPM6BQ13491 265 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 POTEBQ6S5H4 581 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 PLPPR4Q7Z2D5 763 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 TMCO2Q7Z6W1 182 aaPredicted RBP7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 FCHSD1Q86WN1 690 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 MYOCDQ8IZQ8 938 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 NME8Q8N427 588 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 ZNF713Q8N859 430 aaPredicted RBP7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 BANK1Q8NDB2 785 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 EXOC6Q8TAG9 804 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 GPKOWQ92917 476 aaPredicted RBP eCLIP7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 IL17RAQ96F46 866 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 YME1L1Q96TA2 773 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 GLT8D2Q9H1C3 349 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 SENP2Q9HC62 589 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 JADE2Q9NQC1 790 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 SETD4Q9NVD3 440 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 UBIAD1Q9Y5Z9 338 aa7.02□□□□□ -1.29
LSM3P4-201ENST00000502948 ADGRA3Q8IWK6 1321 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 WDR81Q562E7 1941 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 FNDC1Q4ZHG4 1894 aaPredicted RBP7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 GSTTP1A0A1W2PQM5 241 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 SH2B2O14492 632 aaPredicted RBP7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 ENPP3O14638 875 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 DGKIO75912 1065 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 ATG7O95352 703 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 FOSP01100 380 aaPredicted RBP7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 MMP1P03956 469 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 ITGB5P18084 799 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 KCNA5P22460 613 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 TCF7P36402 384 aaPredicted RBP7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 BMPR1AP36894 532 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 NECTIN1Q15223 517 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 FBXO47Q5MNV8 452 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 MARCH8Q5T0T0 291 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 IER5Q5VY09 327 aa7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 PTCRAQ6ISU1 281 aaPredicted RBP7.01□□□□□ -1.29
LSM3P4-201ENST00000502948 PPP1R18Q6NYC8 613 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms