RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 IGKV6D-21A0A0A0MT36 114 aa28.41■■■□□ 2.14
LSM6-202ENST00000502781 DDX39AO00148 427 aaKnown RBP28.41■■■□□ 2.14
LSM6-202ENST00000502781 PSEN2P49810 448 aa28.41■■■□□ 2.14
LSM6-202ENST00000502781 KRT76Q01546 638 aa28.41■■■□□ 2.14
LSM6-202ENST00000502781 SESTD1Q86VW0 696 aa28.41■■■□□ 2.14
LSM6-202ENST00000502781 POTEDQ86YR6 584 aa28.41■■■□□ 2.14
LSM6-202ENST00000502781 FAM126BQ8IXS8 530 aa28.41■■■□□ 2.14
LSM6-202ENST00000502781 HAS1Q92839 578 aa28.41■■■□□ 2.14
LSM6-202ENST00000502781 GJA10Q969M2 543 aa28.41■■■□□ 2.14
LSM6-202ENST00000502781 PCYT2Q99447 389 aa28.41■■■□□ 2.14
LSM6-202ENST00000502781 MROH7Q68CQ1 1323 aa28.41■■■□□ 2.14
LSM6-202ENST00000502781 EMSYQ7Z589 1322 aa28.41■■■□□ 2.14
LSM6-202ENST00000502781 H3BRB1 525 aa28.4■■■□□ 2.14
LSM6-202ENST00000502781 SYT1P21579 422 aa28.4■■■□□ 2.14
LSM6-202ENST00000502781 PTPN11Q06124 597 aaPredicted RBP28.4■■■□□ 2.14
LSM6-202ENST00000502781 MFSD10Q14728 455 aa28.4■■■□□ 2.14
LSM6-202ENST00000502781 KIAA0753Q2KHM9 967 aa28.4■■■□□ 2.14
LSM6-202ENST00000502781 LRCH2Q5VUJ6 765 aa28.4■■■□□ 2.14
LSM6-202ENST00000502781 ABHD15Q6UXT9 468 aa28.4■■■□□ 2.14
LSM6-202ENST00000502781 TRIM50Q86XT4 487 aa28.4■■■□□ 2.14
LSM6-202ENST00000502781 TUT1Q9H6E5 874 aaKnown RBP28.4■■■□□ 2.14
LSM6-202ENST00000502781 GAS7O60861 476 aa28.39■■■□□ 2.14
LSM6-202ENST00000502781 ORC2Q13416 577 aaPredicted RBP28.39■■■□□ 2.14
LSM6-202ENST00000502781 MCTP1Q6DN14 999 aa28.39■■■□□ 2.14
LSM6-202ENST00000502781 SMAP1Q8IYB5 467 aaPredicted RBP28.39■■■□□ 2.14
LSM6-202ENST00000502781 TEKT3Q9BXF9 490 aa28.39■■■□□ 2.14
LSM6-202ENST00000502781 DNAH12Q6ZR08 3092 aa28.39■■■□□ 2.14
LSM6-202ENST00000502781 PQBP1O60828 265 aaKnown RBP28.38■■■□□ 2.13
LSM6-202ENST00000502781 CD4P01730 458 aa28.38■■■□□ 2.13
LSM6-202ENST00000502781 TOB1P50616 345 aaPredicted RBP28.38■■■□□ 2.13
LSM6-202ENST00000502781 UTP14CQ5TAP6 766 aaKnown RBP28.38■■■□□ 2.13
LSM6-202ENST00000502781 C7orf61Q8IZ16 206 aa28.38■■■□□ 2.13
LSM6-202ENST00000502781 ZNF215Q9UL58 517 aaPredicted RBP28.38■■■□□ 2.13
LSM6-202ENST00000502781 NR2E3Q9Y5X4 410 aa28.38■■■□□ 2.13
LSM6-202ENST00000502781 TNRC18O15417 2968 aaPredicted RBP28.38■■■□□ 2.13
LSM6-202ENST00000502781 SUPT20HL2P0C7V6 817 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 FAAP100Q0VG06 881 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 MTMR9Q96QG7 549 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 SMARCAD1Q9H4L7 1026 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 NOL7Q9UMY1 257 aaKnown RBP28.37■■■□□ 2.13
LSM6-202ENST00000502781 DCDC2CA8MYV0 355 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 NEMFO60524 1076 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 ATP2B1P20020 1258 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 TTC38Q5R3I4 469 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 PLPPR4Q7Z2D5 763 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 SLFN12Q8IYM2 578 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 AFAP1L1Q8TED9 768 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 UNC45AQ9H3U1 944 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 PDLIM7Q9NR12 457 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 VAV3Q9UKW4 847 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 PCDHA10Q9Y5I2 948 aa28.37■■■□□ 2.13
LSM6-202ENST00000502781 WDR64B1ANS9 1081 aa28.36■■■□□ 2.13
LSM6-202ENST00000502781 HOXC8P31273 242 aa28.36■■■□□ 2.13
LSM6-202ENST00000502781 PPP2R5CQ13362 524 aa28.36■■■□□ 2.13
LSM6-202ENST00000502781 MIS18BP1Q6P0N0 1132 aa28.36■■■□□ 2.13
LSM6-202ENST00000502781 CCDC60Q8IWA6 550 aaPredicted RBP28.36■■■□□ 2.13
LSM6-202ENST00000502781 RDM1Q8NG50 284 aa28.36■■■□□ 2.13
LSM6-202ENST00000502781 PPP1R13LQ8WUF5 828 aa28.36■■■□□ 2.13
LSM6-202ENST00000502781 ERAP1Q9NZ08 941 aa28.36■■■□□ 2.13
LSM6-202ENST00000502781 GTF2IRD1Q9UHL9 959 aa28.36■■■□□ 2.13
LSM6-202ENST00000502781 TCEAL9Q9UHQ7 104 aa28.36■■■□□ 2.13
LSM6-202ENST00000502781 CEP290O15078 2479 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 VPS37CA5D8V6 355 aaPredicted RBP28.35■■■□□ 2.13
LSM6-202ENST00000502781 B4GALT4O60513 344 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 HSP90AA1P07900 732 aaKnown RBP28.35■■■□□ 2.13
LSM6-202ENST00000502781 CLTBP09497 229 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 SFNP31947 248 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 MCM7P33993 719 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 JAK3P52333 1124 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 RILPL1Q5EBL4 403 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 C7orf31Q8N865 590 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 GLG1Q92896 1179 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 TMEM60Q9H2L4 133 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 RNPEPQ9H4A4 650 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 AZI2Q9H6S1 392 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 DISC1Q9NRI5 854 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 HDAC6Q9UBN7 1215 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 MTMR6Q9Y217 621 aa28.35■■■□□ 2.13
LSM6-202ENST00000502781 BAG4O95429 457 aaKnown RBP28.34■■■□□ 2.13
LSM6-202ENST00000502781 STAT5BP51692 787 aa28.34■■■□□ 2.13
LSM6-202ENST00000502781 CHMP4BP1P59074 171 aa28.34■■■□□ 2.13
LSM6-202ENST00000502781 SPIRE1Q08AE8 756 aa28.34■■■□□ 2.13
LSM6-202ENST00000502781 ZNF174Q15697 407 aa28.34■■■□□ 2.13
LSM6-202ENST00000502781 CALCRLQ16602 461 aa28.34■■■□□ 2.13
LSM6-202ENST00000502781 FAM47CQ5HY64 1035 aa28.34■■■□□ 2.13
LSM6-202ENST00000502781 BRAPQ7Z569 592 aa28.34■■■□□ 2.13
LSM6-202ENST00000502781 CTAGE1Q96RT6 745 aa28.34■■■□□ 2.13
LSM6-202ENST00000502781 TRPV6Q9H1D0 765 aa28.34■■■□□ 2.13
LSM6-202ENST00000502781 TBX21Q9UL17 535 aa28.34■■■□□ 2.13
LSM6-202ENST00000502781 MAFBQ9Y5Q3 323 aaPredicted RBP28.34■■■□□ 2.13
LSM6-202ENST00000502781 TLR3O15455 904 aaKnown RBP28.33■■■□□ 2.13
LSM6-202ENST00000502781 STX6O43752 255 aa28.33■■■□□ 2.13
LSM6-202ENST00000502781 PSAPP07602 524 aa28.33■■■□□ 2.13
LSM6-202ENST00000502781 SLC26A2P50443 739 aa28.33■■■□□ 2.13
LSM6-202ENST00000502781 NBR1Q14596 966 aa28.33■■■□□ 2.13
LSM6-202ENST00000502781 SH3RF1Q7Z6J0 888 aa28.33■■■□□ 2.13
LSM6-202ENST00000502781 C4orf32Q8N8J7 132 aa28.33■■■□□ 2.13
LSM6-202ENST00000502781 TRMT13Q9NUP7 481 aaKnown RBP28.33■■■□□ 2.13
LSM6-202ENST00000502781 PCDHB6Q9Y5E3 794 aa28.33■■■□□ 2.13
LSM6-202ENST00000502781 KIAA0355O15063 1070 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms