RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 IFIT3O14879 490 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-211ENST00000502404 STAM2O75886 525 aa12.88□□□□□ -0.35
UBE2D3-211ENST00000502404 BMP1P13497 986 aa12.88□□□□□ -0.35
UBE2D3-211ENST00000502404 SEC23AQ15436 765 aa12.88□□□□□ -0.35
UBE2D3-211ENST00000502404 GNPTABQ3T906 1256 aa12.88□□□□□ -0.35
UBE2D3-211ENST00000502404 MYSM1Q5VVJ2 828 aa12.88□□□□□ -0.35
UBE2D3-211ENST00000502404 STAG2Q8N3U4 1231 aa12.88□□□□□ -0.35
UBE2D3-211ENST00000502404 SPIRE2Q8WWL2 714 aa12.88□□□□□ -0.35
UBE2D3-211ENST00000502404 HLA-CQ95604 372 aa12.88□□□□□ -0.35
UBE2D3-211ENST00000502404 MAD2L2Q9UI95 211 aa12.88□□□□□ -0.35
UBE2D3-211ENST00000502404 VCANP13611 3396 aa12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 PNMA6FA0A0J9YX94 578 aa12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 NOP56O00567 594 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 GGPS1O95749 300 aa12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 GNAT1P11488 350 aa12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 HOXD8P13378 290 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 WTAPQ15007 396 aa12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 PGM5Q15124 567 aa12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 CATIPQ7Z7H3 387 aa12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 FCHSD1Q86WN1 690 aa12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 HOMER1Q86YM7 354 aa12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 DHX38Q92620 1227 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 C1QTNF1Q9BXJ1 281 aa12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 RIOX1Q9H6W3 641 aa12.87□□□□□ -0.35
UBE2D3-211ENST00000502404 C17orf102A2RUQ5 167 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 NBNO60934 754 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 LGR5O75473 907 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 GJB5O95377 273 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 AMHP03971 560 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 ZNF286BP0CG31 522 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 HOXA13P31271 388 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 USP46P62068 366 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 GRB10Q13322 594 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 NEDD9Q14511 834 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 GRM4Q14833 912 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 KMT5BQ4FZB7 885 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 CYB5R4Q7L1T6 521 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 NCOA7Q8NI08 942 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 EXOC6Q8TAG9 804 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 CUL5Q93034 780 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 TGS1Q96RS0 853 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 CTAGE1Q96RT6 745 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 PRR14Q9BWN1 585 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 USP26Q9BXU7 913 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 INSL6Q9Y581 213 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 GBF1Q92538 1859 aa12.86□□□□□ -0.35
UBE2D3-211ENST00000502404 SCN5AQ14524 2016 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 RSPH10B2B2RC85 870 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 H3BRB1 525 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 OPLAHO14841 1288 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 CAND2O75155 1236 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 RSPH10BP0C881 870 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 KIF5BP33176 963 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 THPOP40225 353 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 ERVK-21P61565 698 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 TFF2Q03403 129 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 GPNMBQ14956 572 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 HSDL1Q3SXM5 330 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 ZNF618Q5T7W0 954 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 TTC22Q5TAA0 569 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 XRRA1Q6P2D8 792 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 SERINC5Q86VE9 423 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 ATP6V0A1Q93050 837 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 YTHDC1Q96MU7 727 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 PIGSQ96S52 555 aa12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 TUT1Q9H6E5 874 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 PRRC2BQ5JSZ5 2229 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-211ENST00000502404 LAMA4Q16363 1823 aa12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 TRIP12Q14669 1992 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 EPOPA6NHQ4 379 aa12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 ACTN4O43707 911 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 PPP1R11O60927 126 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 RGS20O76081 388 aa12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 UBA1P22314 1058 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 DEFB103AP81534 67 aa12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 TRIM71Q2Q1W2 868 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 NYAP1Q6ZVC0 841 aa12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 TMTC2Q8N394 836 aa12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 GIMAP8Q8ND71 665 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 CTCFLQ8NI51 663 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 SEPT8Q92599 483 aa12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 MAP3K14Q99558 947 aa12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 LZTS2Q9BRK4 669 aa12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 CHD7Q9P2D1 2997 aa12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 ZNF215Q9UL58 517 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 MYH6P13533 1939 aa12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 KIAA1217Q5T5P2 1943 aa12.84□□□□□ -0.35
UBE2D3-211ENST00000502404 TANC1Q9C0D5 1861 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 FIBPO43427 364 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 SORBS3O60504 671 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 CYP21A2P08686 494 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 SMARCA1P28370 1054 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 ICAM3P32942 547 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 GNAQP50148 359 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 KCNQ1P51787 676 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 ZNF200P98182 395 aaPredicted RBP12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 SP2Q02086 613 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 TROAPQ12815 778 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 PTPROQ16827 1216 aa12.83□□□□□ -0.36
UBE2D3-211ENST00000502404 METTL7BQ6UX53 244 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms