RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 TREML2Q5T2D2 321 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 KCTD17Q8N5Z5 321 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 ANKRD20A12PQ8NF67 263 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 CNOT6LQ96LI5 555 aaKnown RBP20.29■□□□□ 0.84
LINC00535-201ENST00000501400 REEP2Q9BRK0 252 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 RUSC1Q9BVN2 902 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 BHMT2Q9H2M3 363 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 JADE2Q9NQC1 790 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 KCND1Q9NSA2 647 aa20.29■□□□□ 0.84
LINC00535-201ENST00000501400 NKRFO15226 690 aaKnown RBP eCLIP20.28■□□□□ 0.84
LINC00535-201ENST00000501400 PPP1R12BO60237 982 aaPredicted RBP20.28■□□□□ 0.84
LINC00535-201ENST00000501400 EPHX2P34913 555 aa20.28■□□□□ 0.84
LINC00535-201ENST00000501400 ADKP55263 362 aaKnown RBP20.28■□□□□ 0.84
LINC00535-201ENST00000501400 BAATQ14032 418 aaPredicted RBP20.28■□□□□ 0.84
LINC00535-201ENST00000501400 E4F1Q66K89 784 aaPredicted RBP20.28■□□□□ 0.84
LINC00535-201ENST00000501400 USP50Q70EL3 339 aaPredicted RBP20.28■□□□□ 0.84
LINC00535-201ENST00000501400 CCDC112Q8NEF3 446 aa20.28■□□□□ 0.84
LINC00535-201ENST00000501400 CDCA5Q96FF9 252 aa20.28■□□□□ 0.84
LINC00535-201ENST00000501400 RMDN3Q96TC7 470 aa20.28■□□□□ 0.84
LINC00535-201ENST00000501400 AGO4Q9HCK5 861 aaKnown RBP20.28■□□□□ 0.84
LINC00535-201ENST00000501400 LGALS16A8MUM7 142 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 MYOCDQ8IZQ8 938 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 PIGOQ8TEQ8 1089 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 TEX13BQ9BXU2 312 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 PKD2L1Q9P0L9 805 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 TBC1D7Q9P0N9 293 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.27■□□□□ 0.84
LINC00535-201ENST00000501400 CSADQ9Y600 493 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 SCN4AP35499 1836 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 GYPCP04921 128 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 LRRC63Q05C16 580 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 EPHA7Q15375 998 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 DPY19L2Q6NUT2 758 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 FOXR2Q6PJQ5 311 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 LRRC55Q6ZSA7 311 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 CREBRFQ8IUR6 639 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 CCAR2Q8N163 923 aaKnown RBP20.27■□□□□ 0.84
LINC00535-201ENST00000501400 ZNF507Q8TCN5 953 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 CLMNQ96JQ2 1002 aa20.27■□□□□ 0.84
LINC00535-201ENST00000501400 KIAA1217Q5T5P2 1943 aa20.26■□□□□ 0.83
LINC00535-201ENST00000501400 DDX39AO00148 427 aaKnown RBP20.26■□□□□ 0.83
LINC00535-201ENST00000501400 ZBTB39O15060 712 aa20.26■□□□□ 0.83
LINC00535-201ENST00000501400 KRT18P05783 430 aaKnown RBP20.26■□□□□ 0.83
LINC00535-201ENST00000501400 RBL2Q08999 1139 aa20.26■□□□□ 0.83
LINC00535-201ENST00000501400 MTMR1Q13613 665 aa20.26■□□□□ 0.83
LINC00535-201ENST00000501400 HERC4Q5GLZ8 1057 aaPredicted RBP20.26■□□□□ 0.83
LINC00535-201ENST00000501400 MOB2Q70IA6 237 aa20.26■□□□□ 0.83
LINC00535-201ENST00000501400 TPH2Q8IWU9 490 aa20.26■□□□□ 0.83
LINC00535-201ENST00000501400 MAGEC2Q9UBF1 373 aaPredicted RBP20.26■□□□□ 0.83
LINC00535-201ENST00000501400 RSPH10B2B2RC85 870 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 RSPH10BP0C881 870 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 MUTP22033 750 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 IREB2P48200 963 aaKnown RBP20.25■□□□□ 0.83
LINC00535-201ENST00000501400 ZC3H15Q8WU90 426 aaKnown RBP20.25■□□□□ 0.83
LINC00535-201ENST00000501400 SCFD1Q8WVM8 642 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 ELP3Q9H9T3 547 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 MYCLP12524 364 aaPredicted RBP20.25■□□□□ 0.83
LINC00535-201ENST00000501400 CASP5P51878 434 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 DNTTIP2Q5QJE6 756 aaKnown RBP20.25■□□□□ 0.83
LINC00535-201ENST00000501400 ARHGEF16Q5VV41 709 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 RINT1Q6NUQ1 792 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 SFR1Q86XK3 245 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 FAM114A1Q8IWE2 563 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 C16orf45Q96MC5 204 aaPredicted RBP20.25■□□□□ 0.83
LINC00535-201ENST00000501400 LXNQ9BS40 222 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 TUBGCP2Q9BSJ2 902 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 BCAS3Q9H6U6 928 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 A1CFQ9NQ94 594 aaKnown RBP20.25■□□□□ 0.83
LINC00535-201ENST00000501400 HOXC10Q9NYD6 342 aa20.25■□□□□ 0.83
LINC00535-201ENST00000501400 AKR1B15C9JRZ8 316 aaPredicted RBP20.24■□□□□ 0.83
LINC00535-201ENST00000501400 IRF6O14896 467 aa20.24■□□□□ 0.83
LINC00535-201ENST00000501400 MFAP3LO75121 409 aa20.24■□□□□ 0.83
LINC00535-201ENST00000501400 FXR1P51114 621 aaKnown RBP eCLIP20.24■□□□□ 0.83
LINC00535-201ENST00000501400 UBXN1Q04323 297 aa20.24■□□□□ 0.83
LINC00535-201ENST00000501400 MIIPQ5JXC2 388 aa20.24■□□□□ 0.83
LINC00535-201ENST00000501400 MB21D1Q8N884 522 aa20.24■□□□□ 0.83
LINC00535-201ENST00000501400 ACAD9Q9H845 621 aa20.24■□□□□ 0.83
LINC00535-201ENST00000501400 CYP39A1Q9NYL5 469 aa20.24■□□□□ 0.83
LINC00535-201ENST00000501400 R3HCC1Q9Y3T6 440 aaKnown RBP20.24■□□□□ 0.83
LINC00535-201ENST00000501400 A0A0G2JLL6 359 aaPredicted RBP20.23■□□□□ 0.83
LINC00535-201ENST00000501400 NRDCO43847 1150 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 PRRT2Q7Z6L0 340 aaPredicted RBP20.23■□□□□ 0.83
LINC00535-201ENST00000501400 BANK1Q8NDB2 785 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 NEK9Q8TD19 979 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 OTUD5Q96G74 571 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 KCTD10Q9H3F6 313 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 TRMT1Q9NXH9 659 aaKnown RBP20.23■□□□□ 0.83
LINC00535-201ENST00000501400 ZC3H4Q9UPT8 1303 aaKnown RBP20.23■□□□□ 0.83
LINC00535-201ENST00000501400 WDR81Q562E7 1941 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 A0A1W2PQC6 194 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 GLTPD2A6NH11 291 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 SPDYE5A6NIY4 337 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 B4DLN1 442 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 PEX10O60683 326 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 ATP9AO75110 1047 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 CASP14P31944 242 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 PPATQ06203 517 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 LBX2Q6XYB7 198 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 C1orf186Q6ZWK4 172 aa20.23■□□□□ 0.83
LINC00535-201ENST00000501400 EPM2AIP1Q7L775 607 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms