RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 SNX14Q9Y5W7 946 aa12.26□□□□□ -0.45
CDK11A-222ENST00000498810 TANC1Q9C0D5 1861 aa12.25□□□□□ -0.45
CDK11A-222ENST00000498810 SCN10AQ9Y5Y9 1956 aa12.25□□□□□ -0.45
CDK11A-222ENST00000498810 CCDC196A0A1B0GTZ2 297 aa12.25□□□□□ -0.45
CDK11A-222ENST00000498810 TRIM43BA6NCK2 446 aa12.25□□□□□ -0.45
CDK11A-222ENST00000498810 OPLAHO14841 1288 aa12.25□□□□□ -0.45
CDK11A-222ENST00000498810 SORBS3O60504 671 aa12.25□□□□□ -0.45
CDK11A-222ENST00000498810 CPA1P15085 419 aa12.25□□□□□ -0.45
CDK11A-222ENST00000498810 AKAP17AQ02040 695 aaKnown RBP12.25□□□□□ -0.45
CDK11A-222ENST00000498810 APOBRQ0VD83 1088 aa12.25□□□□□ -0.45
CDK11A-222ENST00000498810 SLC35G1Q2M3R5 365 aa12.25□□□□□ -0.45
CDK11A-222ENST00000498810 TSGA10IPQ3SY00 556 aa12.25□□□□□ -0.45
CDK11A-222ENST00000498810 KCNV1Q6PIU1 500 aa12.25□□□□□ -0.45
CDK11A-222ENST00000498810 DHX37Q8IY37 1157 aaKnown RBP12.25□□□□□ -0.45
CDK11A-222ENST00000498810 GPKOWQ92917 476 aaPredicted RBP eCLIP12.25□□□□□ -0.45
CDK11A-222ENST00000498810 BRF1Q92994 677 aa12.25□□□□□ -0.45
CDK11A-222ENST00000498810 TRIM43Q96BQ3 446 aaPredicted RBP12.25□□□□□ -0.45
CDK11A-222ENST00000498810 PRO3102Q9H379 93 aa12.25□□□□□ -0.45
CDK11A-222ENST00000498810 NOP56O00567 594 aaKnown RBP12.24□□□□□ -0.45
CDK11A-222ENST00000498810 KIAA0355O15063 1070 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 CTAGE5O15320 804 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 ARIH2O95376 493 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 MMP3P08254 477 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 NKX3-2P78367 333 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 PURAQ00577 322 aaKnown RBP12.24□□□□□ -0.45
CDK11A-222ENST00000498810 FAAP100Q0VG06 881 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 COL9A3Q14050 684 aaPredicted RBP12.24□□□□□ -0.45
CDK11A-222ENST00000498810 DGKDQ16760 1214 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 FAM126BQ8IXS8 530 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 TMEM199Q8N511 208 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 AFG1LQ8WV93 481 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 CNTNAP5Q8WYK1 1306 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 RNPC3Q96LT9 517 aaKnown RBP12.24□□□□□ -0.45
CDK11A-222ENST00000498810 HIPK3Q9H422 1215 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 PSTPIP2Q9H939 334 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 MLXIPQ9HAP2 919 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 TOR4AQ9NXH8 423 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 CYP46A1Q9Y6A2 500 aa12.24□□□□□ -0.45
CDK11A-222ENST00000498810 KAT6AQ92794 2004 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 hCG_1984214I3L0E3 225 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 EIF5BO60841 1220 aaKnown RBP12.23□□□□□ -0.45
CDK11A-222ENST00000498810 STAM2O75886 525 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 GGPS1O95749 300 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 TIMP1P01033 207 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 SUPT20HL2P0C7V6 817 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 RPS6KB1P23443 525 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 ADCY7P51828 1080 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 EXOSC10Q01780 885 aaKnown RBP12.23□□□□□ -0.45
CDK11A-222ENST00000498810 GHRHRQ02643 423 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 PPIGQ13427 754 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDK11A-222ENST00000498810 LAMC2Q13753 1193 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 USP17L6PQ6QN14 398 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 NLRX1Q86UT6 975 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 ZNF713Q8N859 430 aaPredicted RBP12.23□□□□□ -0.45
CDK11A-222ENST00000498810 IL31RAQ8NI17 732 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 SPATA33Q96N06 139 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 KATNAL1Q9BW62 490 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 BRPF3Q9ULD4 1205 aa12.23□□□□□ -0.45
CDK11A-222ENST00000498810 FAM187AA6NFU0 413 aa12.22□□□□□ -0.45
CDK11A-222ENST00000498810 A6NJR5 290 aa12.22□□□□□ -0.45
CDK11A-222ENST00000498810 EPB41L2O43491 1005 aaKnown RBP12.22□□□□□ -0.45
CDK11A-222ENST00000498810 B4GALT4O60513 344 aa12.22□□□□□ -0.45
CDK11A-222ENST00000498810 RCAN1P53805 252 aa12.22□□□□□ -0.45
CDK11A-222ENST00000498810 SP4Q02446 784 aa12.22□□□□□ -0.45
CDK11A-222ENST00000498810 ARHGAP1Q07960 439 aa12.22□□□□□ -0.45
CDK11A-222ENST00000498810 UBE2SQ16763 222 aa12.22□□□□□ -0.45
CDK11A-222ENST00000498810 CCDC155Q8N6L0 562 aa12.22□□□□□ -0.45
CDK11A-222ENST00000498810 CCDC12Q8WUD4 166 aaPredicted RBP12.22□□□□□ -0.45
CDK11A-222ENST00000498810 TRPV6Q9H1D0 765 aa12.22□□□□□ -0.45
CDK11A-222ENST00000498810 ALDH8A1Q9H2A2 487 aaPredicted RBP12.22□□□□□ -0.45
CDK11A-222ENST00000498810 MTIF3Q9H2K0 278 aaKnown RBP12.22□□□□□ -0.45
CDK11A-222ENST00000498810 SLC24A3Q9HC58 644 aa12.22□□□□□ -0.45
CDK11A-222ENST00000498810 RTEL1Q9NZ71 1219 aa12.22□□□□□ -0.45
CDK11A-222ENST00000498810 DDX41Q9UJV9 622 aaKnown RBP12.22□□□□□ -0.45
CDK11A-222ENST00000498810 TBX21Q9UL17 535 aa12.22□□□□□ -0.45
CDK11A-222ENST00000498810 TRIP12Q14669 1992 aaPredicted RBP12.21□□□□□ -0.45
CDK11A-222ENST00000498810 PIK3CDO00329 1044 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 CPLX1O14810 134 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 FIBPO43427 364 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 ZNF286BP0CG31 522 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 UBA1P22314 1058 aaKnown RBP12.21□□□□□ -0.45
CDK11A-222ENST00000498810 CYP2C18P33260 490 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 CDK7P50613 346 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 NBPF20Q3BBV1 942 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 LRIT3Q3SXY7 679 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 PCNX4Q63HM2 1172 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 WWC2Q6AWC2 1192 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 MFSD5Q6N075 450 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 CCDC62Q6P9F0 684 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 PSRC1Q6PGN9 363 aaPredicted RBP12.21□□□□□ -0.45
CDK11A-222ENST00000498810 RUFY3Q7L099 469 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 VSIG10LQ86VR7 867 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 C7orf31Q8N865 590 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 PPTC7Q8NI37 304 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 ALG1Q9BT22 464 aa12.21□□□□□ -0.45
CDK11A-222ENST00000498810 SCN5AQ14524 2016 aa12.21□□□□□ -0.46
CDK11A-222ENST00000498810 FRMPD4Q14CM0 1322 aa12.2□□□□□ -0.46
CDK11A-222ENST00000498810 SOX1O00570 391 aaPredicted RBP12.2□□□□□ -0.46
CDK11A-222ENST00000498810 WNT7AO00755 349 aa12.2□□□□□ -0.46
CDK11A-222ENST00000498810 TGFB3P10600 412 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms