RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 KIF28PB7ZC32 967 aa18.98■□□□□ 0.63
PRKCB-210ENST00000498739 H3BQV1 296 aa18.98■□□□□ 0.63
PRKCB-210ENST00000498739 H3BRB1 525 aa18.98■□□□□ 0.63
PRKCB-210ENST00000498739 HAS3O00219 553 aa18.98■□□□□ 0.63
PRKCB-210ENST00000498739 B4GALT4O60513 344 aa18.98■□□□□ 0.63
PRKCB-210ENST00000498739 NFRKBQ6P4R8 1299 aa18.98■□□□□ 0.63
PRKCB-210ENST00000498739 C7orf31Q8N865 590 aa18.98■□□□□ 0.63
PRKCB-210ENST00000498739 SLC5A5Q92911 643 aa18.98■□□□□ 0.63
PRKCB-210ENST00000498739 GJA10Q969M2 543 aa18.98■□□□□ 0.63
PRKCB-210ENST00000498739 TUT1Q9H6E5 874 aaKnown RBP18.98■□□□□ 0.63
PRKCB-210ENST00000498739 FOXD4L1Q9NU39 408 aa18.98■□□□□ 0.63
PRKCB-210ENST00000498739 TMEM39AQ9NV64 488 aa18.98■□□□□ 0.63
PRKCB-210ENST00000498739 PCDH10Q9P2E7 1040 aa18.98■□□□□ 0.63
PRKCB-210ENST00000498739 ZNF215Q9UL58 517 aaPredicted RBP18.98■□□□□ 0.63
PRKCB-210ENST00000498739 GAS7O60861 476 aa18.97■□□□□ 0.63
PRKCB-210ENST00000498739 CCNE2O96020 404 aa18.97■□□□□ 0.63
PRKCB-210ENST00000498739 PTPN11Q06124 597 aaPredicted RBP18.97■□□□□ 0.63
PRKCB-210ENST00000498739 LRCH2Q5VUJ6 765 aa18.97■□□□□ 0.63
PRKCB-210ENST00000498739 LARP1BQ659C4 914 aaKnown RBP18.97■□□□□ 0.63
PRKCB-210ENST00000498739 MCTP1Q6DN14 999 aa18.97■□□□□ 0.63
PRKCB-210ENST00000498739 SH3RF1Q7Z6J0 888 aa18.97■□□□□ 0.63
PRKCB-210ENST00000498739 NOSTRINQ8IVI9 506 aa18.97■□□□□ 0.63
PRKCB-210ENST00000498739 GLG1Q92896 1179 aa18.97■□□□□ 0.63
PRKCB-210ENST00000498739 RIT2Q99578 217 aa18.97■□□□□ 0.63
PRKCB-210ENST00000498739 TEKT3Q9BXF9 490 aa18.97■□□□□ 0.63
PRKCB-210ENST00000498739 TRPV6Q9H1D0 765 aa18.97■□□□□ 0.63
PRKCB-210ENST00000498739 TRMT13Q9NUP7 481 aaKnown RBP18.97■□□□□ 0.63
PRKCB-210ENST00000498739 HDAC6Q9UBN7 1215 aa18.97■□□□□ 0.63
PRKCB-210ENST00000498739 SCN10AQ9Y5Y9 1956 aa18.96■□□□□ 0.63
PRKCB-210ENST00000498739 TRIM43BA6NCK2 446 aa18.96■□□□□ 0.63
PRKCB-210ENST00000498739 CD4P01730 458 aa18.96■□□□□ 0.63
PRKCB-210ENST00000498739 ATP2B1P20020 1258 aa18.96■□□□□ 0.63
PRKCB-210ENST00000498739 KRT76Q01546 638 aa18.96■□□□□ 0.63
PRKCB-210ENST00000498739 PRPF38BQ5VTL8 546 aaKnown RBP18.96■□□□□ 0.63
PRKCB-210ENST00000498739 ZNF746Q6NUN9 644 aaPredicted RBP18.96■□□□□ 0.63
PRKCB-210ENST00000498739 POTEDQ86YR6 584 aa18.96■□□□□ 0.63
PRKCB-210ENST00000498739 ETNPPLQ8TBG4 499 aa18.96■□□□□ 0.63
PRKCB-210ENST00000498739 TRIM43Q96BQ3 446 aaPredicted RBP18.96■□□□□ 0.63
PRKCB-210ENST00000498739 INTS4Q96HW7 963 aaKnown RBP18.96■□□□□ 0.63
PRKCB-210ENST00000498739 AZI2Q9H6S1 392 aa18.96■□□□□ 0.63
PRKCB-210ENST00000498739 EMSYQ7Z589 1322 aa18.96■□□□□ 0.63
PRKCB-210ENST00000498739 WNT7AO00755 349 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 CHMP2AO43633 222 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 MARCH6O60337 910 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 LGR5O75473 907 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 ATG7O95352 703 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 MARK3P27448 753 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 MIS18BP1Q6P0N0 1132 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 SESTD1Q86VW0 696 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 PCYT2Q99447 389 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 SMARCAD1Q9H4L7 1026 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 ERAP1Q9NZ08 941 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 GTF2IRD1Q9UHL9 959 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 NOD1Q9Y239 953 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 SAMM50Q9Y512 469 aa18.95■□□□□ 0.62
PRKCB-210ENST00000498739 BACH1O14867 736 aa18.94■□□□□ 0.62
PRKCB-210ENST00000498739 PSMD10O75832 226 aa18.94■□□□□ 0.62
PRKCB-210ENST00000498739 SUPT20HL2P0C7V6 817 aa18.94■□□□□ 0.62
PRKCB-210ENST00000498739 U2AF2P26368 475 aaKnown RBP eCLIP18.94■□□□□ 0.622e-8■■■■□ 22.1
PRKCB-210ENST00000498739 GDF6Q6KF10 455 aaPredicted RBP18.94■□□□□ 0.62
PRKCB-210ENST00000498739 ABHD15Q6UXT9 468 aa18.94■□□□□ 0.62
PRKCB-210ENST00000498739 SMAP1Q8IYB5 467 aaPredicted RBP18.94■□□□□ 0.62
PRKCB-210ENST00000498739 UNC45AQ9H3U1 944 aa18.94■□□□□ 0.62
PRKCB-210ENST00000498739 KCNMB3Q9NPA1 279 aa18.94■□□□□ 0.62
PRKCB-210ENST00000498739 TBX21Q9UL17 535 aa18.94■□□□□ 0.62
PRKCB-210ENST00000498739 NOL7Q9UMY1 257 aaKnown RBP18.94■□□□□ 0.62
PRKCB-210ENST00000498739 KIAA0355O15063 1070 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 TBX3O15119 743 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 PSAPP07602 524 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 HSP90AA1P07900 732 aaKnown RBP18.93■□□□□ 0.62
PRKCB-210ENST00000498739 SMIM10L2AP0DMW4 78 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 SMIM10L2BP0DMW5 78 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 CYP2C9P11712 490 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 RAG1P15918 1043 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 MCM7P33993 719 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 STAT5BP51692 787 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 PTGISQ16647 500 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 FAM160B1Q5W0V3 765 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 CCDC60Q8IWA6 550 aaPredicted RBP18.93■□□□□ 0.62
PRKCB-210ENST00000498739 FAM20AQ96MK3 541 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 PPP1R12CQ9BZL4 782 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 RNPEPQ9H4A4 650 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 ZNF302Q9NR11 478 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 PCDHA10Q9Y5I2 948 aa18.93■□□□□ 0.62
PRKCB-210ENST00000498739 IGKV6D-21A0A0A0MT36 114 aa18.92■□□□□ 0.62
PRKCB-210ENST00000498739 C17orf102A2RUQ5 167 aa18.92■□□□□ 0.62
PRKCB-210ENST00000498739 VPS37CA5D8V6 355 aaPredicted RBP18.92■□□□□ 0.62
PRKCB-210ENST00000498739 WDR64B1ANS9 1081 aa18.92■□□□□ 0.62
PRKCB-210ENST00000498739 NEMFO60524 1076 aa18.92■□□□□ 0.62
PRKCB-210ENST00000498739 BAG4O95429 457 aaKnown RBP18.92■□□□□ 0.62
PRKCB-210ENST00000498739 PDCP20941 246 aa18.92■□□□□ 0.62
PRKCB-210ENST00000498739 JAK3P52333 1124 aa18.92■□□□□ 0.62
PRKCB-210ENST00000498739 MDM2Q00987 491 aaPredicted RBP18.92■□□□□ 0.62
PRKCB-210ENST00000498739 CALCRLQ16602 461 aa18.92■□□□□ 0.62
PRKCB-210ENST00000498739 SWSAP1Q6NVH7 229 aa18.92■□□□□ 0.62
PRKCB-210ENST00000498739 PLPPR4Q7Z2D5 763 aa18.92■□□□□ 0.62
PRKCB-210ENST00000498739 MIER3Q7Z3K6 550 aa18.92■□□□□ 0.62
PRKCB-210ENST00000498739 HAS1Q92839 578 aa18.92■□□□□ 0.62
PRKCB-210ENST00000498739 LBHD1Q9BQE6 289 aaPredicted RBP18.92■□□□□ 0.62
PRKCB-210ENST00000498739 DISC1Q9NRI5 854 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms