RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 ADGRD2Q7Z7M1 963 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 IQCA1Q86XH1 822 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 HOMER1Q86YM7 354 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 STAG2Q8N3U4 1231 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 APBB2Q92870 758 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 RILPL2Q969X0 211 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 AMNQ9BXJ7 453 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 LMAN2LQ9H0V9 348 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 RNF41Q9H4P4 317 aaPredicted RBP10.6□□□□□ -0.71
CCDC171-209ENST00000498725 TELO2Q9Y4R8 837 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 PCDHB15Q9Y5E8 787 aa10.6□□□□□ -0.71
CCDC171-209ENST00000498725 C5orf67F2Z3F1 127 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 ZNF213O14771 459 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 GFRA3O60609 400 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 PPP1R11O60927 126 aaPredicted RBP10.59□□□□□ -0.71
CCDC171-209ENST00000498725 PPFIA3O75145 1194 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 RB1P06400 928 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 GNAT1P11488 350 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 DNAJB1P25685 340 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 NRIP1P48552 1158 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 RRP1P56182 461 aaKnown RBP10.59□□□□□ -0.71
CCDC171-209ENST00000498725 ZXDAP98168 799 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 TCF15Q12870 199 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 RUFY4Q6ZNE9 571 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 VSIG10LQ86VR7 867 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 DGKHQ86XP1 1220 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 RPGRIP1Q96KN7 1286 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 ZSCAN10Q96SZ4 725 aaPredicted RBP10.59□□□□□ -0.71
CCDC171-209ENST00000498725 RTEL1Q9NZ71 1219 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 BARX2Q9UMQ3 279 aaPredicted RBP10.59□□□□□ -0.71
CCDC171-209ENST00000498725 PCDHGC5Q9Y5F6 944 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 PCDHA1Q9Y5I3 950 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 PLXNA3P51805 1871 aa10.59□□□□□ -0.71
CCDC171-209ENST00000498725 BAZ2BQ9UIF8 2168 aaKnown RBP10.59□□□□□ -0.71
CCDC171-209ENST00000498725 SALL3Q9BXA9 1300 aa10.58□□□□□ -0.71
CCDC171-209ENST00000498725 ENPP3O14638 875 aa10.58□□□□□ -0.72
CCDC171-209ENST00000498725 CHRNA1P02708 482 aa10.58□□□□□ -0.72
CCDC171-209ENST00000498725 MMP1P03956 469 aa10.58□□□□□ -0.72
CCDC171-209ENST00000498725 LINC00271P0C7V0 271 aa10.58□□□□□ -0.72
CCDC171-209ENST00000498725 VCPP55072 806 aaKnown RBP10.58□□□□□ -0.72
CCDC171-209ENST00000498725 STOX1Q6ZVD7 989 aa10.58□□□□□ -0.72
CCDC171-209ENST00000498725 FBXL6Q8N531 539 aa10.58□□□□□ -0.72
CCDC171-209ENST00000498725 ENAHQ8N8S7 591 aaPredicted RBP10.58□□□□□ -0.72
CCDC171-209ENST00000498725 LMBR1Q8WVP7 490 aa10.58□□□□□ -0.72
CCDC171-209ENST00000498725 PIBF1Q8WXW3 757 aa10.58□□□□□ -0.72
CCDC171-209ENST00000498725 ATOH1Q92858 354 aaPredicted RBP10.58□□□□□ -0.72
CCDC171-209ENST00000498725 MSLNLQ96KJ4 702 aa10.58□□□□□ -0.72
CCDC171-209ENST00000498725 MAF1Q9H063 256 aa10.58□□□□□ -0.72
CCDC171-209ENST00000498725 PLAGL2Q9UPG8 496 aa10.58□□□□□ -0.72
CCDC171-209ENST00000498725 RWDD3Q9Y3V2 267 aa10.58□□□□□ -0.72
CCDC171-209ENST00000498725 MRPL42Q9Y6G3 142 aaKnown RBP10.58□□□□□ -0.72
CCDC171-209ENST00000498725 ZMYM6O95789 1325 aa10.58□□□□□ -0.72
CCDC171-209ENST00000498725 TTC3P53804 2025 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 KLRF2D3W0D1 207 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 GCOM1H8Y6P7 765 aaPredicted RBP10.57□□□□□ -0.72
CCDC171-209ENST00000498725 CAND2O75155 1236 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 ITGB1P05556 798 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 POLR2MP0CAP2 368 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 TGFB3P10600 412 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 PCP11498 1178 aaKnown RBP10.57□□□□□ -0.72
CCDC171-209ENST00000498725 SP100P23497 879 aaPredicted RBP10.57□□□□□ -0.72
CCDC171-209ENST00000498725 MARK3P27448 753 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 HOXC8P31273 242 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 GATMP50440 423 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 PDE1AP54750 535 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 IGBP1P78318 339 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 RBM10P98175 930 aaKnown RBP10.57□□□□□ -0.72
CCDC171-209ENST00000498725 CAMK1Q14012 370 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 LPIN1Q14693 890 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 CCDC178Q5BJE1 867 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 FAM26DQ5JW98 314 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 BMP8AQ7Z5Y6 402 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 PPP2R3CQ969Q6 453 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 ZBTB10Q96DT7 871 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 GPR20Q99678 358 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 APOL5Q9BWW9 433 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 USP26Q9BXU7 913 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 CLEC1BQ9P126 229 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 ZSWIM5Q9P217 1185 aa10.57□□□□□ -0.72
CCDC171-209ENST00000498725 ZNF215Q9UL58 517 aaPredicted RBP10.57□□□□□ -0.72
CCDC171-209ENST00000498725 USP15Q9Y4E8 981 aaPredicted RBP10.57□□□□□ -0.72
CCDC171-209ENST00000498725 LOC730098B7Z3J9 87 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 H0Y858 1186 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 PER2O15055 1255 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 ZBTB5O15062 677 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 MRPS9P82933 396 aaKnown RBP10.56□□□□□ -0.72
CCDC171-209ENST00000498725 GNPTABQ3T906 1256 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 IFIT1BQ5T764 474 aaKnown RBP10.56□□□□□ -0.72
CCDC171-209ENST00000498725 ZBTB33Q86T24 672 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 ZNF579Q8NAF0 562 aaKnown RBP10.56□□□□□ -0.72
CCDC171-209ENST00000498725 KLHL23Q8NBE8 558 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 SPPL3Q8TCT6 385 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 MICAL1Q8TDZ2 1067 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 POF1BQ8WVV4 589 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 DNAJB3Q8WWF6 145 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 CLP1Q92989 425 aaKnown RBP10.56□□□□□ -0.72
CCDC171-209ENST00000498725 ZNF689Q96CS4 500 aaPredicted RBP10.56□□□□□ -0.72
CCDC171-209ENST00000498725 DCBLD2Q96PD2 775 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 PIGSQ96S52 555 aa10.56□□□□□ -0.72
CCDC171-209ENST00000498725 UBAC1Q9BSL1 405 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms