RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 CYP3A4P08684 503 aa18.27■□□□□ 0.52
LMNA-217ENST00000498722 CLTBP09497 229 aa18.27■□□□□ 0.52
LMNA-217ENST00000498722 FAM86B2P0C5J1 330 aa18.27■□□□□ 0.52
LMNA-217ENST00000498722 ARP10275 920 aa18.27■□□□□ 0.52
LMNA-217ENST00000498722 KCNA2P16389 499 aa18.27■□□□□ 0.52
LMNA-217ENST00000498722 NPY5RQ15761 445 aa18.27■□□□□ 0.52
LMNA-217ENST00000498722 PRR16Q569H4 304 aa18.27■□□□□ 0.52
LMNA-217ENST00000498722 FAM173BQ6P4H8 233 aa18.27■□□□□ 0.52
LMNA-217ENST00000498722 GPT2Q8TD30 523 aa18.27■□□□□ 0.52
LMNA-217ENST00000498722 OXER1Q8TDS5 423 aa18.27■□□□□ 0.52
LMNA-217ENST00000498722 PCDH10Q9P2E7 1040 aa18.27■□□□□ 0.52
LMNA-217ENST00000498722 MEIS1O00470 390 aa18.26■□□□□ 0.51
LMNA-217ENST00000498722 PPFIA4O75335 1185 aa18.26■□□□□ 0.51
LMNA-217ENST00000498722 MMP1P03956 469 aa18.26■□□□□ 0.51
LMNA-217ENST00000498722 SETQ01105 290 aaPredicted RBP18.26■□□□□ 0.51
LMNA-217ENST00000498722 INF2Q27J81 1249 aa18.26■□□□□ 0.51
LMNA-217ENST00000498722 NBPF20Q3BBV1 942 aa18.26■□□□□ 0.51
LMNA-217ENST00000498722 UTP14CQ5TAP6 766 aaKnown RBP18.26■□□□□ 0.51
LMNA-217ENST00000498722 PIK3AP1Q6ZUJ8 805 aa18.26■□□□□ 0.51
LMNA-217ENST00000498722 NIPA1Q7RTP0 329 aa18.26■□□□□ 0.51
LMNA-217ENST00000498722 LEO1Q8WVC0 666 aaPredicted RBP18.26■□□□□ 0.51
LMNA-217ENST00000498722 CRYGNQ8WXF5 182 aa18.26■□□□□ 0.51
LMNA-217ENST00000498722 KATNAL1Q9BW62 490 aa18.26■□□□□ 0.51
LMNA-217ENST00000498722 AGO4Q9HCK5 861 aaKnown RBP18.26■□□□□ 0.51
LMNA-217ENST00000498722 JPH1Q9HDC5 661 aaPredicted RBP18.26■□□□□ 0.51
LMNA-217ENST00000498722 TMEM39AQ9NV64 488 aa18.26■□□□□ 0.51
LMNA-217ENST00000498722 GOLGA6L4A6NEF3 574 aa18.25■□□□□ 0.51
LMNA-217ENST00000498722 M0R2N6 131 aa18.25■□□□□ 0.51
LMNA-217ENST00000498722 DDX39AO00148 427 aaKnown RBP18.25■□□□□ 0.51
LMNA-217ENST00000498722 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.51
LMNA-217ENST00000498722 USP11P51784 963 aa18.25■□□□□ 0.51
LMNA-217ENST00000498722 ANKRD33Q7Z3H0 272 aa18.25■□□□□ 0.51
LMNA-217ENST00000498722 TOX2Q96NM4 488 aa18.25■□□□□ 0.51
LMNA-217ENST00000498722 GPR20Q99678 358 aa18.25■□□□□ 0.51
LMNA-217ENST00000498722 ZNF577Q9BSK1 485 aa18.25■□□□□ 0.51
LMNA-217ENST00000498722 GZF1Q9H116 711 aaPredicted RBP18.25■□□□□ 0.51
LMNA-217ENST00000498722 FOXP1Q9H334 677 aaPredicted RBP18.25■□□□□ 0.51
LMNA-217ENST00000498722 PDLIM7Q9NR12 457 aa18.25■□□□□ 0.51
LMNA-217ENST00000498722 TFIP11Q9UBB9 837 aaKnown RBP18.25■□□□□ 0.51
LMNA-217ENST00000498722 SLC9A2Q9UBY0 812 aa18.25■□□□□ 0.51
LMNA-217ENST00000498722 GRIN2DO15399 1336 aa18.25■□□□□ 0.51
LMNA-217ENST00000498722 IGLV3-22A0A075B6J6 115 aa18.24■□□□□ 0.51
LMNA-217ENST00000498722 GADD45BO75293 160 aaPredicted RBP18.24■□□□□ 0.51
LMNA-217ENST00000498722 LGALS2P05162 132 aa18.24■□□□□ 0.51
LMNA-217ENST00000498722 PSEN2P49810 448 aa18.24■□□□□ 0.51
LMNA-217ENST00000498722 CDK7P50613 346 aa18.24■□□□□ 0.51
LMNA-217ENST00000498722 NR5A1Q13285 461 aa18.24■□□□□ 0.51
LMNA-217ENST00000498722 MFSD10Q14728 455 aa18.24■□□□□ 0.51
LMNA-217ENST00000498722 KIAA0753Q2KHM9 967 aa18.24■□□□□ 0.51
LMNA-217ENST00000498722 CAVIN1Q6NZI2 390 aaKnown RBP18.24■□□□□ 0.51
LMNA-217ENST00000498722 SH3RF1Q7Z6J0 888 aa18.24■□□□□ 0.51
LMNA-217ENST00000498722 DIS3L2Q8IYB7 885 aaKnown RBP18.24■□□□□ 0.51
LMNA-217ENST00000498722 C7orf31Q8N865 590 aa18.24■□□□□ 0.51
LMNA-217ENST00000498722 LBHD1Q9BQE6 289 aaPredicted RBP18.24■□□□□ 0.51
LMNA-217ENST00000498722 SEZ6LQ9BYH1 1024 aa18.24■□□□□ 0.51
LMNA-217ENST00000498722 TCEAL9Q9UHQ7 104 aa18.24■□□□□ 0.51
LMNA-217ENST00000498722 TELO2Q9Y4R8 837 aa18.24■□□□□ 0.51
LMNA-217ENST00000498722 IPO5O00410 1097 aaKnown RBP18.23■□□□□ 0.51
LMNA-217ENST00000498722 CIITAP33076 1130 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 TCF7P36402 384 aaPredicted RBP18.23■□□□□ 0.51
LMNA-217ENST00000498722 FAAP100Q0VG06 881 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 ITGB3BPQ13352 177 aaPredicted RBP18.23■□□□□ 0.51
LMNA-217ENST00000498722 LETM2Q2VYF4 491 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 NFRKBQ6P4R8 1299 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 NEK8Q86SG6 692 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 FAM126BQ8IXS8 530 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 SLC43A3Q8NBI5 491 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 KAT2BQ92831 832 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 TRPV6Q9H1D0 765 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 RCOR1Q9UKL0 485 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 NOD1Q9Y239 953 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 NFASCO94856 1347 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 BTBD18B2RXH4 712 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 KIF28PB7ZC32 967 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 H3BRB1 525 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 B4GALT4O60513 344 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 TDP2O95551 362 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 YEATS4O95619 227 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 F2P00734 622 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 HOXD8P13378 290 aaPredicted RBP18.23■□□□□ 0.51
LMNA-217ENST00000498722 RAG1P15918 1043 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 MDM2Q00987 491 aaPredicted RBP18.23■□□□□ 0.51
LMNA-217ENST00000498722 TRIM50Q86XT4 487 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 SEPT1Q8WYJ6 367 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 USP28Q96RU2 1077 aa18.23■□□□□ 0.51
LMNA-217ENST00000498722 TUT1Q9H6E5 874 aaKnown RBP18.23■□□□□ 0.51
LMNA-217ENST00000498722 TRMT13Q9NUP7 481 aaKnown RBP18.23■□□□□ 0.51
LMNA-217ENST00000498722 ZNF215Q9UL58 517 aaPredicted RBP18.23■□□□□ 0.51
LMNA-217ENST00000498722 TRIM43BA6NCK2 446 aa18.22■□□□□ 0.51
LMNA-217ENST00000498722 FAM205CA6NFA0 338 aa18.22■□□□□ 0.51
LMNA-217ENST00000498722 CHRDL2Q6WN34 429 aa18.22■□□□□ 0.51
LMNA-217ENST00000498722 NOSTRINQ8IVI9 506 aa18.22■□□□□ 0.51
LMNA-217ENST00000498722 GLG1Q92896 1179 aa18.22■□□□□ 0.51
LMNA-217ENST00000498722 TRIM43Q96BQ3 446 aaPredicted RBP18.22■□□□□ 0.51
LMNA-217ENST00000498722 C16orf70Q9BSU1 422 aa18.22■□□□□ 0.51
LMNA-217ENST00000498722 DDX25Q9UHL0 483 aaKnown RBP18.22■□□□□ 0.51
LMNA-217ENST00000498722 SCN5AQ14524 2016 aa18.21■□□□□ 0.51
LMNA-217ENST00000498722 TANC1Q9C0D5 1861 aa18.21■□□□□ 0.51
LMNA-217ENST00000498722 GSTTP1A0A1W2PQM5 241 aa18.21■□□□□ 0.51
LMNA-217ENST00000498722 CCNT1O60563 726 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms