RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 LINC00114Q6XXX2 140 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 ARHGAP36Q6ZRI8 547 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 FRMD7Q6ZUT3 714 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 SRGAP1Q7Z6B7 1085 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 MIER2Q8N344 545 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 ANKRD42Q8N9B4 389 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 GIMAP7Q8NHV1 300 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 ACAP3Q96P50 834 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 ACO2Q99798 780 aaKnown RBP10.3□□□□□ -0.76
SNX13-212ENST00000498463 CDADC1Q9BWV3 514 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 NAA15Q9BXJ9 866 aaKnown RBP10.3□□□□□ -0.76
SNX13-212ENST00000498463 GTPBP4Q9BZE4 634 aaKnown RBP10.3□□□□□ -0.76
SNX13-212ENST00000498463 FAM204AQ9H8W3 233 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 SP110Q9HB58 689 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 TCFL5Q9UL49 500 aa10.3□□□□□ -0.76
SNX13-212ENST00000498463 C7orf72A4D263 438 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 HIP1RO75146 1068 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 ZBED1O96006 694 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 BMP3P12645 472 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 SLC5A1P13866 664 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 CD53P19397 219 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 AGXTP21549 392 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 C5AR1P21730 350 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 PTX3P26022 381 aaPredicted RBP10.29□□□□□ -0.76
SNX13-212ENST00000498463 ADKP55263 362 aaKnown RBP10.29□□□□□ -0.76
SNX13-212ENST00000498463 SRSF2Q01130 221 aaKnown RBP10.29□□□□□ -0.76
SNX13-212ENST00000498463 CHAF1AQ13111 956 aaPredicted RBP10.29□□□□□ -0.76
SNX13-212ENST00000498463 LONRF1Q17RB8 773 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 UVSSAQ2YD98 709 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 FAM186BQ8IYM0 893 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 USHBP1Q8N6Y0 703 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 DIS3LQ8TF46 1054 aaKnown RBP10.29□□□□□ -0.76
SNX13-212ENST00000498463 SSH1Q8WYL5 1049 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 HPS3Q969F9 1004 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 TMEM169Q96HH4 297 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 MYRFLQ96LU7 910 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 FOXP3Q9BZS1 431 aa10.29□□□□□ -0.76
SNX13-212ENST00000498463 ZNF277Q9NRM2 450 aaPredicted RBP10.29□□□□□ -0.76
SNX13-212ENST00000498463 TCRBV5S4A2TA0A5A2 114 aa10.28□□□□□ -0.76
SNX13-212ENST00000498463 GNB5O14775 395 aa10.28□□□□□ -0.76
SNX13-212ENST00000498463 FKTNO75072 461 aa10.28□□□□□ -0.76
SNX13-212ENST00000498463 GRIK4Q16099 956 aa10.28□□□□□ -0.76
SNX13-212ENST00000498463 UTP4Q969X6 686 aaKnown RBP10.28□□□□□ -0.76
SNX13-212ENST00000498463 IRX2Q9BZI1 471 aaPredicted RBP10.28□□□□□ -0.76
SNX13-212ENST00000498463 TRIT1Q9H3H1 467 aaKnown RBP10.28□□□□□ -0.76
SNX13-212ENST00000498463 USP21Q9UK80 565 aa10.28□□□□□ -0.76
SNX13-212ENST00000498463 GPR45Q9Y5Y3 372 aa10.28□□□□□ -0.76
SNX13-212ENST00000498463 H7BY64 318 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 IGF2BP3O00425 579 aaKnown RBP eCLIP10.27□□□□□ -0.77
SNX13-212ENST00000498463 MAN2B1O00754 1011 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 HRGP04196 525 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 ENPP1P22413 925 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 CD40P25942 277 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 MTNR1BP49286 362 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 ALDH5A1P51649 535 aaPredicted RBP10.27□□□□□ -0.77
SNX13-212ENST00000498463 IFI16Q16666 785 aaKnown RBP10.27□□□□□ -0.77
SNX13-212ENST00000498463 PRRT3Q5FWE3 981 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 HABP4Q5JVS0 413 aaKnown RBP10.27□□□□□ -0.77
SNX13-212ENST00000498463 CLEC4GQ6UXB4 293 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 CYP2R1Q6VVX0 501 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 TSPYL5Q86VY4 417 aaPredicted RBP10.27□□□□□ -0.77
SNX13-212ENST00000498463 GRAMD1CQ8IYS0 662 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 NAT16Q8N8M0 369 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 DPF3Q92784 378 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 MAP3K14Q99558 947 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 MYD88Q99836 296 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 ACSS2Q9NR19 701 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 BTG4Q9NY30 223 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 LUZP4Q9P127 313 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 ZNF281Q9Y2X9 895 aa10.27□□□□□ -0.77
SNX13-212ENST00000498463 ABHD14A-ACY1A0A1B0GW23 586 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 SSU72P8A0A1W2PR75 194 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 GNAT3A8MTJ3 354 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 TBC1D8O95759 1140 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 POU2F2P09086 479 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 SETSIPP0DME0 302 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 COL6A2P12110 1019 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 OSMP13725 252 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 ECE1P42892 770 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 SNRPNP63162 240 aaKnown RBP10.26□□□□□ -0.77
SNX13-212ENST00000498463 SPIRE1Q08AE8 756 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 KRT72Q14CN4 511 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 NFKBIBQ15653 356 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 FSCN1Q16658 493 aaKnown RBP10.26□□□□□ -0.77
SNX13-212ENST00000498463 PLA2G4EQ3MJ16 856 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 PAOXQ6QHF9 649 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 OVCH2Q7RTZ1 564 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 ZZZ3Q8IYH5 903 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 FAM156AQ8NDB6 213 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 NEDD1Q8NHV4 660 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 WHAMMQ8TF30 809 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 SLC16A10Q8TF71 515 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 IRF7Q92985 503 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 HERPUD2Q9BSE4 406 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 B3GALT1Q9Y5Z6 326 aa10.26□□□□□ -0.77
SNX13-212ENST00000498463 WTIPA6NIX2 430 aaPredicted RBP10.25□□□□□ -0.77
SNX13-212ENST00000498463 FAM155AB1AL88 458 aaPredicted RBP10.25□□□□□ -0.77
SNX13-212ENST00000498463 SCDO00767 359 aa10.25□□□□□ -0.77
SNX13-212ENST00000498463 TERTO14746 1132 aaKnown RBP10.25□□□□□ -0.77
SNX13-212ENST00000498463 NKRFO15226 690 aaKnown RBP eCLIP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms