RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 USP24Q9UPU5 2620 aa10.58□□□□□ -0.72
FAM3D-205ENST00000498347 ATG2AQ2TAZ0 1938 aa10.58□□□□□ -0.72
FAM3D-205ENST00000498347 GSG1L2A8MUP6 293 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 C2CD4DB7Z1M9 353 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 TREHO43280 583 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 ASGR2P07307 311 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 CTSHP09668 335 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 ZNF286BP0CG31 522 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 GNAT1P11488 350 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 TFAP4Q01664 338 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 KCNC3Q14003 757 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 ZSCAN25Q6NSZ9 544 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 CES5AQ6NT32 575 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 BTNL9Q6UXG8 535 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 RASGRP4Q8TDF6 673 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 IWS1Q96ST2 819 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 RTKNQ9BST9 563 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 APOL5Q9BWW9 433 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 MAF1Q9H063 256 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 PUS7LQ9H0K6 701 aaKnown RBP10.57□□□□□ -0.72
FAM3D-205ENST00000498347 RNPEPQ9H4A4 650 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 RNF216Q9NWF9 866 aaPredicted RBP10.57□□□□□ -0.72
FAM3D-205ENST00000498347 PAG1Q9NWQ8 432 aa10.57□□□□□ -0.72
FAM3D-205ENST00000498347 GREB1LQ9C091 1923 aaPredicted RBP10.56□□□□□ -0.72
FAM3D-205ENST00000498347 MYH4Q9Y623 1939 aa10.56□□□□□ -0.72
FAM3D-205ENST00000498347 DCDC2BA2VCK2 349 aa10.56□□□□□ -0.72
FAM3D-205ENST00000498347 STK25O00506 426 aa10.56□□□□□ -0.72
FAM3D-205ENST00000498347 HOXD8P13378 290 aaPredicted RBP10.56□□□□□ -0.72
FAM3D-205ENST00000498347 RARSP54136 660 aaKnown RBP10.56□□□□□ -0.72
FAM3D-205ENST00000498347 TPRNQ4KMQ1 711 aa10.56□□□□□ -0.72
FAM3D-205ENST00000498347 NSUN6Q8TEA1 469 aaKnown RBP10.56□□□□□ -0.72
FAM3D-205ENST00000498347 UPF2Q9HAU5 1272 aaKnown RBP10.56□□□□□ -0.72
FAM3D-205ENST00000498347 PCDHB12Q9Y5F1 795 aa10.56□□□□□ -0.72
FAM3D-205ENST00000498347 TTC3P53804 2025 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 LCTP09848 1927 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 H3BRB1 525 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 EIF3JO75822 258 aaKnown RBP10.55□□□□□ -0.72
FAM3D-205ENST00000498347 ARP10275 920 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 HOXC8P31273 242 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 SLC16A2P36021 539 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 MTHFRP42898 656 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 ERVFC1P60507 584 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 ITIH3Q06033 890 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 COL9A3Q14050 684 aaPredicted RBP10.55□□□□□ -0.72
FAM3D-205ENST00000498347 VARS2Q5ST30 1063 aaKnown RBP10.55□□□□□ -0.72
FAM3D-205ENST00000498347 SYDE2Q5VT97 1194 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 MYSM1Q5VVJ2 828 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 TTBK2Q6IQ55 1244 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 SUMF1Q8NBK3 374 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 C16orf70Q9BSU1 422 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 ADAM7Q9H2U9 754 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 RWDD1Q9H446 243 aaPredicted RBP10.55□□□□□ -0.72
FAM3D-205ENST00000498347 TUT1Q9H6E5 874 aaKnown RBP10.55□□□□□ -0.72
FAM3D-205ENST00000498347 EHMT1Q9H9B1 1298 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 AAASQ9NRG9 546 aa10.55□□□□□ -0.72
FAM3D-205ENST00000498347 CDV3Q9UKY7 258 aaKnown RBP10.55□□□□□ -0.72
FAM3D-205ENST00000498347 GPR179Q6PRD1 2367 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 IGHDP01880 384 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 CHRNA1P02708 482 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 CHGBP05060 677 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 IFIT2P09913 472 aaKnown RBP10.54□□□□□ -0.72
FAM3D-205ENST00000498347 SP9P0CG40 484 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 STAG3L1P0CL83 205 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 SMIM10L2AP0DMW4 78 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 SMIM10L2BP0DMW5 78 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 HSP90AB4PQ58FF6 505 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 KCNV1Q6PIU1 500 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 CRIPAKQ8N1N5 446 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 CLASRPQ8N2M8 674 aaKnown RBP10.54□□□□□ -0.72
FAM3D-205ENST00000498347 DCAF4Q8WV16 495 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 SPATA33Q96N06 139 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 TAAR1Q96RJ0 339 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 BOLA2Q9H3K6 86 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 POMKQ9H5K3 350 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 ERVK-5Q9HDB9 667 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 IL1RAPL2Q9NP60 686 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 FBXL21Q9UKT6 434 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 STX8Q9UNK0 236 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 USTQ9Y2C2 406 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 MRVI1Q9Y6F6 885 aa10.54□□□□□ -0.72
FAM3D-205ENST00000498347 SLC3A2P08195 630 aaKnown RBP10.53□□□□□ -0.72
FAM3D-205ENST00000498347 GHRP10912 638 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 TRIM27P14373 513 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 LMNB2Q03252 620 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 DMWDQ09019 674 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 TBC1D8BQ0IIM8 1120 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 TDGQ13569 410 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 CCDC96Q2M329 555 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 HSDL1Q3SXM5 330 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 ATAT1Q5SQI0 421 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 CELF3Q5SZQ8 465 aaKnown RBP10.53□□□□□ -0.72
FAM3D-205ENST00000498347 LLGL2Q6P1M3 1020 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 SKAP1Q86WV1 359 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 NPAS4Q8IUM7 802 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 SIX5Q8N196 739 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 TDRD5Q8NAT2 981 aaKnown RBP10.53□□□□□ -0.72
FAM3D-205ENST00000498347 RHPN1Q8TCX5 695 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 RIN2Q8WYP3 895 aaPredicted RBP10.53□□□□□ -0.72
FAM3D-205ENST00000498347 CYP26B1Q9NR63 512 aa10.53□□□□□ -0.72
FAM3D-205ENST00000498347 SETD4Q9NVD3 440 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms