RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ZCCHC8Q6NZY4 707 aaKnown RBP6.91□□□□□ -1.3
SSR3-209ENST00000498205 JAZF1Q86VZ6 243 aa6.91□□□□□ -1.3
SSR3-209ENST00000498205 NINJ1Q92982 152 aa6.91□□□□□ -1.3
SSR3-209ENST00000498205 GORASP1Q9BQQ3 440 aa6.91□□□□□ -1.3
SSR3-209ENST00000498205 KANSL2Q9H9L4 492 aa6.91□□□□□ -1.3
SSR3-209ENST00000498205 DLL4Q9NR61 685 aa6.91□□□□□ -1.3
SSR3-209ENST00000498205 CBLCQ9ULV8 474 aa6.91□□□□□ -1.3
SSR3-209ENST00000498205 TBX22Q9Y458 520 aa6.91□□□□□ -1.3
SSR3-209ENST00000498205 KRTAP9-6A0A140TA67 174 aa6.9□□□□□ -1.3
SSR3-209ENST00000498205 ENO2P09104 434 aaPredicted RBP6.9□□□□□ -1.3
SSR3-209ENST00000498205 STAT5AP42229 794 aa6.9□□□□□ -1.3
SSR3-209ENST00000498205 HERVK_113P62684 666 aa6.9□□□□□ -1.3
SSR3-209ENST00000498205 VWA3BQ502W6 1294 aa6.9□□□□□ -1.3
SSR3-209ENST00000498205 BTBD8Q5XKL5 378 aa6.9□□□□□ -1.3
SSR3-209ENST00000498205 FGD2Q7Z6J4 655 aa6.9□□□□□ -1.3
SSR3-209ENST00000498205 OSTM1Q86WC4 334 aa6.9□□□□□ -1.3
SSR3-209ENST00000498205 CLUHP3Q96NS8 147 aa6.9□□□□□ -1.3
SSR3-209ENST00000498205 TMX1Q9H3N1 280 aa6.9□□□□□ -1.3
SSR3-209ENST00000498205 LUC7LQ9NQ29 371 aaKnown RBP6.9□□□□□ -1.3
SSR3-209ENST00000498205 TCRBV5S4A2TA0A5A2 114 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 PPP1R12AO14974 1030 aaPredicted RBP6.89□□□□□ -1.31
SSR3-209ENST00000498205 HIP1RO75146 1068 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 SASH1O94885 1247 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 AMY2AP04746 511 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 CHGBP05060 677 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 PTPN1P18031 435 aaKnown RBP6.89□□□□□ -1.31
SSR3-209ENST00000498205 AMY2BP19961 511 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 RPL13P26373 211 aaKnown RBP6.89□□□□□ -1.31
SSR3-209ENST00000498205 THBS2P35442 1172 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 JAM2P57087 298 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 TMEM177Q53S58 311 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 PLEKHG4Q58EX7 1191 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 OVCH1Q7RTY7 1134 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 KIAA0907Q7Z7F0 614 aaPredicted RBP6.89□□□□□ -1.31
SSR3-209ENST00000498205 FAM26EQ8N5C1 309 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 C2orf69Q8N8R5 385 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 SH3RF2Q8TEC5 729 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 SMURF1Q9HCE7 757 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 CABP5Q9NP86 173 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 COQ6Q9Y2Z9 468 aa6.89□□□□□ -1.31
SSR3-209ENST00000498205 BAZ1AQ9NRL2 1556 aaPredicted RBP6.88□□□□□ -1.31
SSR3-209ENST00000498205 SLC12A8A0AV02 714 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 MAN2B1O00754 1011 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 FFAR3O14843 346 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 DNAJC8O75937 253 aaPredicted RBP6.88□□□□□ -1.31
SSR3-209ENST00000498205 KCNA6P17658 529 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 KRT15P19012 456 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 HSD3B2P26439 372 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 SARSP49591 514 aaKnown RBP6.88□□□□□ -1.31
SSR3-209ENST00000498205 GRIN1Q05586 938 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 LIPIQ6XZB0 460 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 OTOP1Q7RTM1 612 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 PTRH1Q86Y79 214 aaKnown RBP6.88□□□□□ -1.31
SSR3-209ENST00000498205 KIF18BQ86Y91 864 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 AHI1Q8N157 1196 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 IGSF22Q8N9C0 903 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 NOX5Q96PH1 765 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 ORAI3Q9BRQ5 295 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 SLKQ9H2G2 1235 aaPredicted RBP6.88□□□□□ -1.31
SSR3-209ENST00000498205 RIC8BQ9NVN3 520 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 SAMD15Q9P1V8 674 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 RAPGEFL1Q9UHV5 662 aa6.88□□□□□ -1.31
SSR3-209ENST00000498205 LTFP02788 710 aa6.87□□□□□ -1.31
SSR3-209ENST00000498205 POU3F2P20265 443 aaPredicted RBP6.87□□□□□ -1.31
SSR3-209ENST00000498205 ADAM9Q13443 819 aa6.87□□□□□ -1.31
SSR3-209ENST00000498205 CD276Q5ZPR3 534 aa6.87□□□□□ -1.31
SSR3-209ENST00000498205 NIM1KQ8IY84 436 aa6.87□□□□□ -1.31
SSR3-209ENST00000498205 CARFQ8N187 725 aa6.87□□□□□ -1.31
SSR3-209ENST00000498205 PPM1KQ8N3J5 372 aa6.87□□□□□ -1.31
SSR3-209ENST00000498205 CISD2Q8N5K1 135 aaKnown RBP6.87□□□□□ -1.31
SSR3-209ENST00000498205 IGDCC4Q8TDY8 1250 aa6.87□□□□□ -1.31
SSR3-209ENST00000498205 WNK4Q96J92 1243 aa6.87□□□□□ -1.31
SSR3-209ENST00000498205 BOCQ9BWV1 1114 aa6.87□□□□□ -1.31
SSR3-209ENST00000498205 CD244Q9BZW8 370 aa6.87□□□□□ -1.31
SSR3-209ENST00000498205 KCNH7Q9NS40 1196 aa6.87□□□□□ -1.31
SSR3-209ENST00000498205 TELO2Q9Y4R8 837 aa6.87□□□□□ -1.31
SSR3-209ENST00000498205 CD2APQ9Y5K6 639 aa6.87□□□□□ -1.31
SSR3-209ENST00000498205 TNPO3Q9Y5L0 923 aaKnown RBP6.87□□□□□ -1.31
SSR3-209ENST00000498205 KCNC1P48547 511 aa6.86□□□□□ -1.31
SSR3-209ENST00000498205 DLX2Q07687 328 aaPredicted RBP6.86□□□□□ -1.31
SSR3-209ENST00000498205 DBPQ10586 325 aaPredicted RBP6.86□□□□□ -1.31
SSR3-209ENST00000498205 SMAD4Q13485 552 aaKnown RBP6.86□□□□□ -1.31
SSR3-209ENST00000498205 FAM26FQ5R3K3 315 aa6.86□□□□□ -1.31
SSR3-209ENST00000498205 LCNL1Q6ZST4 164 aa6.86□□□□□ -1.31
SSR3-209ENST00000498205 DTX3Q8N9I9 347 aa6.86□□□□□ -1.31
SSR3-209ENST00000498205 MARCH10Q8NA82 808 aaPredicted RBP6.86□□□□□ -1.31
SSR3-209ENST00000498205 CHST14Q8NCH0 376 aa6.86□□□□□ -1.31
SSR3-209ENST00000498205 MFSD3Q96ES6 412 aa6.86□□□□□ -1.31
SSR3-209ENST00000498205 SPATA6Q9NWH7 488 aaPredicted RBP6.86□□□□□ -1.31
SSR3-209ENST00000498205 C9orf118A6NHY6 69 aa6.85□□□□□ -1.31
SSR3-209ENST00000498205 ZNF839A8K0R7 811 aa6.85□□□□□ -1.31
SSR3-209ENST00000498205 ACOT7O00154 380 aa6.85□□□□□ -1.31
SSR3-209ENST00000498205 SDHAP31040 664 aa6.85□□□□□ -1.31
SSR3-209ENST00000498205 MECP2P51608 486 aaKnown RBP6.85□□□□□ -1.31
SSR3-209ENST00000498205 CFAP100Q494V2 611 aa6.85□□□□□ -1.31
SSR3-209ENST00000498205 PRR31Q5SQ13 230 aa6.85□□□□□ -1.31
SSR3-209ENST00000498205 LCE3BQ5TA77 95 aa6.85□□□□□ -1.31
SSR3-209ENST00000498205 SDE2Q6IQ49 451 aa6.85□□□□□ -1.31
SSR3-209ENST00000498205 DPP8Q6V1X1 898 aaPredicted RBP6.85□□□□□ -1.31
SSR3-209ENST00000498205 FAM124AQ86V42 546 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms