RNA–Protein interactions for RNA: ENST00000497964.1

MACF1-226, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-226ENST00000497964 CSF1RP07333 972 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 KLRC1P26715 233 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 SARSP49591 514 aaKnown RBP7.82□□□□□ -1.16
MACF1-226ENST00000497964 PMS1P54277 932 aaKnown RBP7.82□□□□□ -1.16
MACF1-226ENST00000497964 HERVK_113P62684 666 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 PPP2R2AP63151 447 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 MYO1EQ12965 1108 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 MKRN4PQ13434 485 aaPredicted RBP7.82□□□□□ -1.16
MACF1-226ENST00000497964 CUL1Q13616 776 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 KCNB1Q14721 858 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 LRRC14Q15048 493 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 CCDC38Q502W7 563 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 FAM186BQ8IYM0 893 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 CELF1Q92879 486 aaKnown RBP7.82□□□□□ -1.16
MACF1-226ENST00000497964 HVCN1Q96D96 273 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 CEP72Q9P209 647 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 THRAP3Q9Y2W1 955 aaKnown RBP7.82□□□□□ -1.16
MACF1-226ENST00000497964 ADAMTS13Q76LX8 1427 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 CDHR2Q9BYE9 1310 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 RHOBTB3O94955 611 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 FERP16591 822 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 RCAN1P53805 252 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 TROAPQ12815 778 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 PPP2R5EQ16537 467 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 ODR4Q5SWX8 454 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 GIMAP8Q8ND71 665 aaPredicted RBP7.82□□□□□ -1.16
MACF1-226ENST00000497964 KIFAP3Q92845 792 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 PSMD1Q99460 953 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 EPN3Q9H201 632 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 CXorf56Q9H5V9 222 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 GAS7O60861 476 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 TSNAXIP1Q2TAA8 658 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 LRCH2Q5VUJ6 765 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 SH3RF3Q8TEJ3 882 aaPredicted RBP7.82□□□□□ -1.16
MACF1-226ENST00000497964 MTA3Q9BTC8 594 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 BHMT2Q9H2M3 363 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 PCIF1Q9H4Z3 704 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 CD248Q9HCU0 757 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 USP40Q9NVE5 1235 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 HAUS2Q9NVX0 235 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 CPSF2Q9P2I0 782 aaKnown RBP7.82□□□□□ -1.16
MACF1-226ENST00000497964 PPP1R1BQ9UD71 204 aaPredicted RBP7.82□□□□□ -1.16
MACF1-226ENST00000497964 FRMPD1Q5SYB0 1578 aa7.82□□□□□ -1.16
MACF1-226ENST00000497964 ERVV-1B6SEH8 477 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 RAD51CO43502 376 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 FYB2Q5VWT5 728 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 PDXDC1Q6P996 788 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 CPXCR1Q8N123 301 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 GUF1Q8N442 669 aaKnown RBP7.81□□□□□ -1.16
MACF1-226ENST00000497964 ZNF526Q8TF50 670 aaPredicted RBP7.81□□□□□ -1.16
MACF1-226ENST00000497964 FNBP1Q96RU3 617 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 CCSER1Q9C0I3 900 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 PCDHA6Q9UN73 950 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 MINPP1Q9UNW1 487 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.81□□□□□ -1.16
MACF1-226ENST00000497964 RABGAP1Q9Y3P9 1069 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 PCDHA8Q9Y5H6 950 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 DIP2CQ9Y2E4 1556 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 PNPLA7Q6ZV29 1317 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 KIF20BQ96Q89 1820 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 POTEB3A0JP26 581 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 USP17L5A8MUK1 530 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 POTECB2RU33 542 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 USP17L15C9J2P7 530 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 USP17L13C9JLJ4 530 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 USP17L11C9JVI0 530 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 USP17L18D6R9N7 530 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 USP17L22D6RA61 530 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 USP17L17D6RBQ6 530 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 USP17L19D6RCP7 530 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 USP17L20D6RJB6 530 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 CCDC188H7C350 402 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 ACTN1P12814 892 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 LMNB1P20700 586 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 CDK8P49336 464 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 USP17L24Q0WX57 530 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 COASYQ13057 564 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 MUM1Q2TAK8 710 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 ANKRD20A3Q5VUR7 823 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 USP17L6PQ6QN14 398 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 POTEBQ6S5H4 581 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 FAM47EQ6ZV65 393 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 ARMC9Q7Z3E5 817 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 SPICE1Q8N0Z3 855 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 IMPG2Q9BZV3 1241 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 BARHL2Q9NY43 387 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 BCS1LQ9Y276 419 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 NOC2LQ9Y3T9 749 aaKnown RBP7.81□□□□□ -1.16
MACF1-226ENST00000497964 PASKQ96RG2 1323 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 SMIM22K7EJ46 135 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 TTI1O43156 1089 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 ATF7P17544 494 aaPredicted RBP7.81□□□□□ -1.16
MACF1-226ENST00000497964 CASP7P55210 303 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 MDM2Q00987 491 aaPredicted RBP7.81□□□□□ -1.16
MACF1-226ENST00000497964 KAZNQ674X7 775 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 PPP4R3AQ6IN85 833 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 DNAAF5Q86Y56 855 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 TMEM139Q8IV31 216 aa7.81□□□□□ -1.16
MACF1-226ENST00000497964 CNOT10Q9H9A5 744 aaKnown RBP7.81□□□□□ -1.16
MACF1-226ENST00000497964 PLAGL2Q9UPG8 496 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms