RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 ALG3Q92685 438 aa9.71□□□□□ -0.86
GARNL3-221ENST00000497703 HOMER2Q9NSB8 354 aa9.71□□□□□ -0.86
GARNL3-221ENST00000497703 RIC8BQ9NVN3 520 aa9.71□□□□□ -0.86
GARNL3-221ENST00000497703 KLHL14Q9P2G3 628 aa9.71□□□□□ -0.86
GARNL3-221ENST00000497703 TCRBV5S2A0A599 114 aa9.7□□□□□ -0.86
GARNL3-221ENST00000497703 ATP2A2P16615 1042 aaKnown RBP9.7□□□□□ -0.86
GARNL3-221ENST00000497703 PMLP29590 882 aa9.7□□□□□ -0.86
GARNL3-221ENST00000497703 EPHA5P54756 1037 aa9.7□□□□□ -0.86
GARNL3-221ENST00000497703 STAT4Q14765 748 aa9.7□□□□□ -0.86
GARNL3-221ENST00000497703 ATP13A4Q4VNC1 1196 aa9.7□□□□□ -0.86
GARNL3-221ENST00000497703 TMC6Q7Z403 805 aa9.7□□□□□ -0.86
GARNL3-221ENST00000497703 ZNF605Q86T29 641 aa9.7□□□□□ -0.86
GARNL3-221ENST00000497703 Q8N3U1 123 aa9.7□□□□□ -0.86
GARNL3-221ENST00000497703 PRPF38AQ8NAV1 312 aaKnown RBP9.7□□□□□ -0.86
GARNL3-221ENST00000497703 CHTF18Q8WVB6 975 aa9.7□□□□□ -0.86
GARNL3-221ENST00000497703 OXSMQ9NWU1 459 aa9.7□□□□□ -0.86
GARNL3-221ENST00000497703 NEMP1O14524 444 aa9.69□□□□□ -0.86
GARNL3-221ENST00000497703 PAPLNO95428 1278 aa9.69□□□□□ -0.86
GARNL3-221ENST00000497703 BPIP17213 487 aa9.69□□□□□ -0.86
GARNL3-221ENST00000497703 ITGB5P18084 799 aa9.69□□□□□ -0.86
GARNL3-221ENST00000497703 YBX1P67809 324 aaKnown RBP9.69□□□□□ -0.86
GARNL3-221ENST00000497703 SPATS2Q86XZ4 545 aaKnown RBP9.69□□□□□ -0.86
GARNL3-221ENST00000497703 EFHBQ8N7U6 833 aa9.69□□□□□ -0.86
GARNL3-221ENST00000497703 SH3RF2Q8TEC5 729 aa9.69□□□□□ -0.86
GARNL3-221ENST00000497703 CEP89Q96ST8 783 aa9.69□□□□□ -0.86
GARNL3-221ENST00000497703 NGRNQ9NPE2 291 aaKnown RBP9.69□□□□□ -0.86
GARNL3-221ENST00000497703 ACSS2Q9NR19 701 aa9.69□□□□□ -0.86
GARNL3-221ENST00000497703 KCNH7Q9NS40 1196 aa9.69□□□□□ -0.86
GARNL3-221ENST00000497703 SIRT5Q9NXA8 310 aa9.69□□□□□ -0.86
GARNL3-221ENST00000497703 DCAF1Q9Y4B6 1507 aa9.69□□□□□ -0.86
GARNL3-221ENST00000497703 ULK1O75385 1050 aa9.68□□□□□ -0.86
GARNL3-221ENST00000497703 EYA4O95677 639 aa9.68□□□□□ -0.86
GARNL3-221ENST00000497703 PTPN1P18031 435 aaKnown RBP9.68□□□□□ -0.86
GARNL3-221ENST00000497703 KIF11P52732 1056 aa9.68□□□□□ -0.86
GARNL3-221ENST00000497703 TMPRSS15P98073 1019 aa9.68□□□□□ -0.86
GARNL3-221ENST00000497703 CPZQ66K79 652 aa9.68□□□□□ -0.86
GARNL3-221ENST00000497703 TMEM132EQ6IEE7 984 aa9.68□□□□□ -0.86
GARNL3-221ENST00000497703 ETV3LQ6ZN32 361 aa9.68□□□□□ -0.86
GARNL3-221ENST00000497703 ZC3H18Q86VM9 953 aaKnown RBP9.68□□□□□ -0.86
GARNL3-221ENST00000497703 KIAA1958Q8N8K9 716 aa9.68□□□□□ -0.86
GARNL3-221ENST00000497703 EPB41L4BQ9H329 900 aa9.68□□□□□ -0.86
GARNL3-221ENST00000497703 ZNF552Q9H707 407 aaPredicted RBP9.68□□□□□ -0.86
GARNL3-221ENST00000497703 PDS5BQ9NTI5 1447 aa9.67□□□□□ -0.86
GARNL3-221ENST00000497703 PRAMEF25A6NGN4 478 aa9.67□□□□□ -0.86
GARNL3-221ENST00000497703 GPR39O43194 453 aa9.67□□□□□ -0.86
GARNL3-221ENST00000497703 CYP17A1P05093 508 aa9.67□□□□□ -0.86
GARNL3-221ENST00000497703 ADCYAP1R1P41586 468 aa9.67□□□□□ -0.86
GARNL3-221ENST00000497703 FAPQ12884 760 aa9.67□□□□□ -0.86
GARNL3-221ENST00000497703 TMEM132BQ14DG7 1078 aa9.67□□□□□ -0.86
GARNL3-221ENST00000497703 IQSEC1Q6DN90 963 aa9.67□□□□□ -0.86
GARNL3-221ENST00000497703 NECAB2Q7Z6G3 386 aa9.67□□□□□ -0.86
GARNL3-221ENST00000497703 AMIGO3Q86WK7 504 aa9.67□□□□□ -0.86
GARNL3-221ENST00000497703 NOSTRINQ8IVI9 506 aa9.67□□□□□ -0.86
GARNL3-221ENST00000497703 RBM12BQ8IXT5 1001 aaKnown RBP9.67□□□□□ -0.86
GARNL3-221ENST00000497703 TTLL11Q8NHH1 800 aa9.67□□□□□ -0.86
GARNL3-221ENST00000497703 TOE1Q96GM8 510 aaKnown RBP9.67□□□□□ -0.86
GARNL3-221ENST00000497703 FAM126AQ9BYI3 521 aaPredicted RBP9.67□□□□□ -0.86
GARNL3-221ENST00000497703 DCP1AQ9NPI6 582 aaPredicted RBP9.67□□□□□ -0.86
GARNL3-221ENST00000497703 TYW1Q9NV66 732 aaKnown RBP9.67□□□□□ -0.86
GARNL3-221ENST00000497703 SPO11Q9Y5K1 396 aa9.67□□□□□ -0.86
GARNL3-221ENST00000497703 BAZ1AQ9NRL2 1556 aaPredicted RBP9.67□□□□□ -0.86
GARNL3-221ENST00000497703 BUB1BO60566 1050 aaPredicted RBP9.66□□□□□ -0.86
GARNL3-221ENST00000497703 POU3F3P20264 500 aaPredicted RBP9.66□□□□□ -0.86
GARNL3-221ENST00000497703 CDKN1CP49918 316 aaPredicted RBP9.66□□□□□ -0.86
GARNL3-221ENST00000497703 SRSF3P84103 164 aaKnown RBP9.66□□□□□ -0.86
GARNL3-221ENST00000497703 GRIN1Q05586 938 aa9.66□□□□□ -0.86
GARNL3-221ENST00000497703 TARBP2Q15633 366 aaKnown RBP9.66□□□□□ -0.86
GARNL3-221ENST00000497703 RGL3Q3MIN7 710 aa9.66□□□□□ -0.86
GARNL3-221ENST00000497703 FERMT3Q86UX7 667 aa9.66□□□□□ -0.86
GARNL3-221ENST00000497703 ARRDC4Q8NCT1 418 aa9.66□□□□□ -0.86
GARNL3-221ENST00000497703 CLEC4DQ8WXI8 215 aa9.66□□□□□ -0.86
GARNL3-221ENST00000497703 LIN37Q96GY3 246 aaPredicted RBP9.66□□□□□ -0.86
GARNL3-221ENST00000497703 DIRC2Q96SL1 478 aa9.66□□□□□ -0.86
GARNL3-221ENST00000497703 NSUN3Q9H649 340 aaKnown RBP9.66□□□□□ -0.86
GARNL3-221ENST00000497703 TOMM22Q9NS69 142 aa9.66□□□□□ -0.86
GARNL3-221ENST00000497703 SPTLC3Q9NUV7 552 aa9.66□□□□□ -0.86
GARNL3-221ENST00000497703 SLC5A4Q9NY91 659 aa9.66□□□□□ -0.86
GARNL3-221ENST00000497703 B3GALT1Q9Y5Z6 326 aa9.66□□□□□ -0.86
GARNL3-221ENST00000497703 RAB11FIP3O75154 756 aa9.65□□□□□ -0.86
GARNL3-221ENST00000497703 LTFP02788 710 aa9.65□□□□□ -0.86
GARNL3-221ENST00000497703 VIPR1P32241 457 aa9.65□□□□□ -0.86
GARNL3-221ENST00000497703 GUCY2FP51841 1108 aa9.65□□□□□ -0.86
GARNL3-221ENST00000497703 ZNF200P98182 395 aaPredicted RBP9.65□□□□□ -0.86
GARNL3-221ENST00000497703 CC2D1AQ6P1N0 951 aaPredicted RBP9.65□□□□□ -0.86
GARNL3-221ENST00000497703 FAM126BQ8IXS8 530 aa9.65□□□□□ -0.86
GARNL3-221ENST00000497703 ZZZ3Q8IYH5 903 aa9.65□□□□□ -0.86
GARNL3-221ENST00000497703 EMC7Q9NPA0 242 aa9.65□□□□□ -0.86
GARNL3-221ENST00000497703 DTLQ9NZJ0 730 aa9.65□□□□□ -0.86
GARNL3-221ENST00000497703 ZCCHC6Q5VYS8 1495 aaKnown RBP9.65□□□□□ -0.87
GARNL3-221ENST00000497703 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-221ENST00000497703 ZNF503-AS2A6NEH8 195 aa9.64□□□□□ -0.87
GARNL3-221ENST00000497703 ZBTB48P10074 688 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-221ENST00000497703 NCAM1P13591 858 aa9.64□□□□□ -0.87
GARNL3-221ENST00000497703 PFKLP17858 780 aa9.64□□□□□ -0.87
GARNL3-221ENST00000497703 NKX3-2P78367 333 aa9.64□□□□□ -0.87
GARNL3-221ENST00000497703 FAM50AQ14320 339 aaKnown RBP9.64□□□□□ -0.87
GARNL3-221ENST00000497703 DDB1Q16531 1140 aa9.64□□□□□ -0.87
GARNL3-221ENST00000497703 PAN2Q504Q3 1202 aaKnown RBP9.64□□□□□ -0.87
GARNL3-221ENST00000497703 HDGFL2Q7Z4V5 671 aaPredicted RBP9.64□□□□□ -0.87
GARNL3-221ENST00000497703 RPUSD2Q8IZ73 545 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms