RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 STK36Q9NRP7 1315 aa18.18■□□□□ 0.5
CTDSP1-214ENST00000497677 PITPNM1O00562 1244 aa18.17■□□□□ 0.5
CTDSP1-214ENST00000497677 DHX15O43143 795 aaKnown RBP18.17■□□□□ 0.5
CTDSP1-214ENST00000497677 TCF7P36402 384 aaPredicted RBP18.17■□□□□ 0.5
CTDSP1-214ENST00000497677 ZNF76P36508 570 aa18.17■□□□□ 0.5
CTDSP1-214ENST00000497677 UTP14CQ5TAP6 766 aaKnown RBP18.17■□□□□ 0.5
CTDSP1-214ENST00000497677 RASIP1Q5U651 963 aa18.17■□□□□ 0.5
CTDSP1-214ENST00000497677 PLA2G4DQ86XP0 818 aa18.17■□□□□ 0.5
CTDSP1-214ENST00000497677 SCLYQ96I15 445 aa18.17■□□□□ 0.5
CTDSP1-214ENST00000497677 PCYT2Q99447 389 aa18.17■□□□□ 0.5
CTDSP1-214ENST00000497677 JPH1Q9HDC5 661 aaPredicted RBP18.17■□□□□ 0.5
CTDSP1-214ENST00000497677 NFASCO94856 1347 aa18.17■□□□□ 0.5
CTDSP1-214ENST00000497677 HSP90AA1P07900 732 aaKnown RBP18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 IQCF3P0C7M6 154 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 SMIM10L2AP0DMW4 78 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 SMIM10L2BP0DMW5 78 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 RBL2Q08999 1139 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 GPNMBQ14956 572 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 TRIM71Q2Q1W2 868 aaKnown RBP18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 GALNT17Q6IS24 598 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 ZNF365Q70YC5 407 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 BLIDQ8IZY5 108 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 WNT8BQ93098 351 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 LENG9Q96B70 501 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 PHF20Q9BVI0 1012 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 RNPEPQ9H4A4 650 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 GJB4Q9NTQ9 266 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 SLC9A2Q9UBY0 812 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 KCNJ14Q9UNX9 436 aa18.16■□□□□ 0.5
CTDSP1-214ENST00000497677 LGR5O75473 907 aa18.15■□□□□ 0.5
CTDSP1-214ENST00000497677 ATG7O95352 703 aa18.15■□□□□ 0.5
CTDSP1-214ENST00000497677 ADAM17P78536 824 aa18.15■□□□□ 0.5
CTDSP1-214ENST00000497677 PTK7Q13308 1070 aa18.15■□□□□ 0.5
CTDSP1-214ENST00000497677 BFSP2Q13515 415 aa18.15■□□□□ 0.5
CTDSP1-214ENST00000497677 GPR153Q6NV75 609 aa18.15■□□□□ 0.5
CTDSP1-214ENST00000497677 NSUN7Q8NE18 718 aaKnown RBP18.15■□□□□ 0.5
CTDSP1-214ENST00000497677 CAGE1Q8TC20 777 aa18.15■□□□□ 0.5
CTDSP1-214ENST00000497677 RNPC3Q96LT9 517 aaKnown RBP18.15■□□□□ 0.5
CTDSP1-214ENST00000497677 SDF4Q9BRK5 362 aa18.15■□□□□ 0.5
CTDSP1-214ENST00000497677 ORC3Q9UBD5 711 aaPredicted RBP18.15■□□□□ 0.5
CTDSP1-214ENST00000497677 NOD1Q9Y239 953 aa18.15■□□□□ 0.5
CTDSP1-214ENST00000497677 CCNE2O96020 404 aa18.14■□□□□ 0.49
CTDSP1-214ENST00000497677 USP11P51784 963 aa18.14■□□□□ 0.49
CTDSP1-214ENST00000497677 ACTR2P61160 394 aa18.14■□□□□ 0.49
CTDSP1-214ENST00000497677 TRAF7Q6Q0C0 670 aa18.14■□□□□ 0.49
CTDSP1-214ENST00000497677 SERINC5Q86VE9 423 aa18.14■□□□□ 0.49
CTDSP1-214ENST00000497677 TBCKQ8TEA7 893 aa18.14■□□□□ 0.49
CTDSP1-214ENST00000497677 HERVK_113Q902F9 699 aa18.14■□□□□ 0.49
CTDSP1-214ENST00000497677 ZSCAN31Q96LW9 406 aaPredicted RBP18.14■□□□□ 0.49
CTDSP1-214ENST00000497677 SETD4Q9NVD3 440 aa18.14■□□□□ 0.49
CTDSP1-214ENST00000497677 ZNF215Q9UL58 517 aaPredicted RBP18.14■□□□□ 0.49
CTDSP1-214ENST00000497677 LIMCH1Q9UPQ0 1083 aa18.14■□□□□ 0.49
CTDSP1-214ENST00000497677 LAMA2P24043 3122 aaKnown RBP18.14■□□□□ 0.49
CTDSP1-214ENST00000497677 C17orf102A2RUQ5 167 aa18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 IPO5O00410 1097 aaKnown RBP18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 TREHO43280 583 aa18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 JAK2O60674 1132 aa18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 FGBP02675 491 aa18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 CKBP12277 381 aa18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 PRR16Q569H4 304 aa18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 PSRC1Q6PGN9 363 aaPredicted RBP18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 RPUSD2Q8IZ73 545 aaKnown RBP18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 RETREG2Q8NC44 543 aa18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 AFAP1L1Q8TED9 768 aa18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 UIMC1Q96RL1 719 aa18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 SMARCAD1Q9H4L7 1026 aa18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 CIZ1Q9ULV3 898 aaPredicted RBP18.13■□□□□ 0.49
CTDSP1-214ENST00000497677 MYH7BA7E2Y1 1941 aa18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 CYP3A7-CYP3A51PA0A087WV96 503 aa18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 IGKV6D-21A0A0A0MT36 114 aa18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 CD2BP2O95400 341 aaKnown RBP18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 SELPP16109 830 aa18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 CYP3A7P24462 503 aa18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 SMAD3P84022 425 aaKnown RBP18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 SETQ01105 290 aaPredicted RBP18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 FAM109BQ6ICB4 259 aaPredicted RBP18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 ABHD15Q6UXT9 468 aa18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 OXER1Q8TDS5 423 aa18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 ATP6V0A1Q93050 837 aa18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 ZNF577Q9BSK1 485 aa18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 SH2B1Q9NRF2 756 aaPredicted RBP18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 ERAP1Q9NZ08 941 aa18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 CXXC1Q9P0U4 656 aaPredicted RBP18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 EMSYQ7Z589 1322 aa18.12■□□□□ 0.49
CTDSP1-214ENST00000497677 MARK3P27448 753 aa18.11■□□□□ 0.49
CTDSP1-214ENST00000497677 RFC2P35250 354 aa18.11■□□□□ 0.49
CTDSP1-214ENST00000497677 OTOP2Q7RTS6 562 aa18.11■□□□□ 0.49
CTDSP1-214ENST00000497677 CCDC155Q8N6L0 562 aa18.11■□□□□ 0.49
CTDSP1-214ENST00000497677 LMBR1Q8WVP7 490 aa18.11■□□□□ 0.49
CTDSP1-214ENST00000497677 WASF1Q92558 559 aa18.11■□□□□ 0.49
CTDSP1-214ENST00000497677 GLG1Q92896 1179 aa18.11■□□□□ 0.49
CTDSP1-214ENST00000497677 INTS4Q96HW7 963 aaKnown RBP18.11■□□□□ 0.49
CTDSP1-214ENST00000497677 MBOAT7Q96N66 472 aa18.11■□□□□ 0.49
CTDSP1-214ENST00000497677 TBC1D22BQ9NU19 505 aa18.11■□□□□ 0.49
CTDSP1-214ENST00000497677 NRCAMQ92823 1304 aa18.11■□□□□ 0.49
CTDSP1-214ENST00000497677 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.1■□□□□ 0.49
CTDSP1-214ENST00000497677 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.1■□□□□ 0.49
CTDSP1-214ENST00000497677 RBAK-RBAKDNI3L0D1 243 aa18.1■□□□□ 0.49
CTDSP1-214ENST00000497677 DDX39AO00148 427 aaKnown RBP18.1■□□□□ 0.49
CTDSP1-214ENST00000497677 MSH4O15457 936 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms