RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ID3Q02535 119 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 SCARF1Q14162 830 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 PDCD1Q15116 288 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 SMAD2Q15796 467 aaKnown RBP7.22□□□□□ -1.25
BRCA1-224ENST00000497488 NBPF9Q3BBW0 867 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 CCDC38Q502W7 563 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 HP1BP3Q5SSJ5 553 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-224ENST00000497488 RETSATQ6NUM9 610 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 TBC1D1Q86TI0 1168 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-224ENST00000497488 FAM26EQ8N5C1 309 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 ZNF610Q8N9Z0 462 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 NPLOC4Q8TAT6 608 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 TGFBRAP1Q8WUH2 860 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 TBC1D20Q96BZ9 403 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 ZDHHC5Q9C0B5 715 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 MS4A5Q9H3V2 200 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 BLOC1S4Q9NUP1 217 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 DNMT3LQ9UJW3 386 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 SYNGAP1Q96PV0 1343 aa7.22□□□□□ -1.25
BRCA1-224ENST00000497488 RSF1Q96T23 1441 aaPredicted RBP7.21□□□□□ -1.25
BRCA1-224ENST00000497488 EYA2O00167 538 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 THBDP07204 575 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 IFIT1P09914 478 aaKnown RBP7.21□□□□□ -1.26
BRCA1-224ENST00000497488 CASP5P51878 434 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 BLMHQ13867 455 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 DBN1Q16643 649 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 DPY19L1Q2PZI1 675 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 VPS53Q5VIR6 699 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 ZNF468Q5VIY5 522 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-224ENST00000497488 IZUMO3Q5VZ72 239 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 FAAH2Q6GMR7 532 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 FAM117BQ6P1L5 589 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 NPNTQ6UXI9 565 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 USP45Q70EL2 814 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 PDZD4Q76G19 769 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-224ENST00000497488 CREBRFQ8IUR6 639 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 CISD2Q8N5K1 135 aaKnown RBP7.21□□□□□ -1.26
BRCA1-224ENST00000497488 RNF214Q8ND24 703 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 ZSCAN18Q8TBC5 510 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-224ENST00000497488 FRS2Q8WU20 508 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 COPS5Q92905 334 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 TNFRSF25Q93038 417 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 UBXN10Q96LJ8 280 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 KREMEN1Q96MU8 473 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 UNC45AQ9H3U1 944 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 DNAJC28Q9NX36 388 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 SERPINB13Q9UIV8 391 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 CRYL1Q9Y2S2 319 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 SF3B6Q9Y3B4 125 aaKnown RBP7.21□□□□□ -1.26
BRCA1-224ENST00000497488 AFG3L2Q9Y4W6 797 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 SPO11Q9Y5K1 396 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 GPR45Q9Y5Y3 372 aa7.21□□□□□ -1.26
BRCA1-224ENST00000497488 SETD1BQ9UPS6 1966 aaKnown RBP7.2□□□□□ -1.26
BRCA1-224ENST00000497488 RRN3P2A6NIE6 340 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 H7C1D1 291 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 ARNTLO00327 626 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 MEFVO15553 781 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-224ENST00000497488 CD4P01730 458 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 RPN1P04843 607 aaKnown RBP7.2□□□□□ -1.26
BRCA1-224ENST00000497488 PDCP20941 246 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 MTNR1BP49286 362 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 ICA1Q05084 483 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 PRKG2Q13237 762 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.2□□□□□ -1.26
BRCA1-224ENST00000497488 NBPF8Q3BBV2 869 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 ARMC3Q5W041 872 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 UBE3DQ7Z6J8 389 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 PRR18Q8N4B5 295 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 IL22RA1Q8N6P7 574 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 KCT2Q8NC54 265 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 LRTOMTQ8WZ04 291 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 RPGRQ92834 1020 aaKnown RBP7.2□□□□□ -1.26
BRCA1-224ENST00000497488 FBXW5Q969U6 566 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 PRR13Q9NZ81 148 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 TMEFF2Q9UIK5 374 aaPredicted RBP7.2□□□□□ -1.26
BRCA1-224ENST00000497488 RNF112Q9ULX5 631 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 ST14Q9Y5Y6 855 aa7.2□□□□□ -1.26
BRCA1-224ENST00000497488 LINC01387J3KSC0 135 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 FSCN2O14926 492 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 GSTA4O15217 222 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 TMPRSS2O15393 492 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 NCK2O43639 380 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 KDM1AO60341 852 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 NDUFS2O75306 463 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 BAIAP3O94812 1187 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 SMARCA1P28370 1054 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 LTBRP36941 435 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 AGFG1P52594 562 aaKnown RBP7.19□□□□□ -1.26
BRCA1-224ENST00000497488 SRSF2Q01130 221 aaKnown RBP7.19□□□□□ -1.26
BRCA1-224ENST00000497488 CTBSQ01459 385 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 KIF23Q02241 960 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-224ENST00000497488 APBA1Q02410 837 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 CNN3Q15417 329 aaKnown RBP7.19□□□□□ -1.26
BRCA1-224ENST00000497488 KIZQ2M2Z5 673 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 ANO4Q32M45 955 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 C16orf59Q7L2K0 433 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 CDC37L1Q7L3B6 337 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 GET4Q7L5D6 327 aaPredicted RBP7.19□□□□□ -1.26
BRCA1-224ENST00000497488 DNAJB8Q8NHS0 232 aa7.19□□□□□ -1.26
BRCA1-224ENST00000497488 ARL8AQ96BM9 186 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms