RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 EMSYQ7Z589 1322 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 DEXIO95424 95 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 CTDNEP1O95476 244 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 ACRP10323 421 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 CKBP12277 381 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 SCRN1Q12765 414 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 MBTPS1Q14703 1052 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 C8orf34Q49A92 452 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 FAM47CQ5HY64 1035 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 DEFB123Q8N688 67 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 DAGLBQ8NCG7 672 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 MBOAT7Q96N66 472 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 GUCD1Q96NT3 240 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 KIF2CQ99661 725 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 SEMA6BQ9H3T3 888 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 C6orf50Q9HD87 102 aa12.45□□□□□ -0.42
SHROOM3-210ENST00000497440 TANC1Q9C0D5 1861 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 NRCAMQ92823 1304 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 STK36Q9NRP7 1315 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 CUL9Q8IWT3 2517 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 CYP3A7-CYP3A51PA0A087WV96 503 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 MBLAC1A4D2B0 266 aaPredicted RBP12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 CAND2O75155 1236 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 SMIM10L2AP0DMW4 78 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 SMIM10L2BP0DMW5 78 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 SELPP16109 830 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 CYP3A7P24462 503 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 TCF7P36402 384 aaPredicted RBP12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 USP11P51784 963 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 ZNF200P98182 395 aaPredicted RBP12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 FAM26DQ5JW98 314 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 MARCH8Q5T0T0 291 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 GALNT17Q6IS24 598 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 ABHD15Q6UXT9 468 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 Q7L0L9 218 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 PLPPR4Q7Z2D5 763 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 REXO1Q8N1G1 1221 aaKnown RBP12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 BICD2Q8TD16 824 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 PGBD1Q96JS3 809 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 SLC26A6Q9BXS9 759 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 STXBP5LQ9Y2K9 1186 aa12.44□□□□□ -0.42
SHROOM3-210ENST00000497440 NOP56O00567 594 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 TREHO43280 583 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 NBNO60934 754 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 CCNE2O96020 404 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 FDPSP14324 419 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 AK2P54819 239 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 ANKRD1Q15327 319 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 JAKMIP3Q5VZ66 844 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 B3GNT9Q6UX72 402 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 LRRC8DQ7L1W4 858 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 TRIM50Q86XT4 487 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 RETREG2Q8NC44 543 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 CCDC148Q8NFR7 591 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 PHOSPHO2Q8TCD6 241 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 LARP6Q9BRS8 491 aaKnown RBP12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 ALG1Q9BT22 464 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 PBX4Q9BYU1 374 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 SMARCAD1Q9H4L7 1026 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 JPH1Q9HDC5 661 aaPredicted RBP12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 VPS54Q9P1Q0 977 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 SLC9A2Q9UBY0 812 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 PCDHA4Q9UN74 947 aa12.43□□□□□ -0.42
SHROOM3-210ENST00000497440 KAT6AQ92794 2004 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 C17orf102A2RUQ5 167 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 SORBS3O60504 671 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 BAIAP3O94812 1187 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 ACTR2P61160 394 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 AKAP17AQ02040 695 aaKnown RBP12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 SSRP1Q08945 709 aaKnown RBP12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 ME3Q16798 604 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 ZNF618Q5T7W0 954 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 MOXD1Q6UVY6 613 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 OTOP2Q7RTS6 562 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 TRIM22Q8IYM9 498 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 CCDC155Q8N6L0 562 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 LMBR1Q8WVP7 490 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 SETD4Q9NVD3 440 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 ERAP1Q9NZ08 941 aa12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 ZNF215Q9UL58 517 aaPredicted RBP12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 NAP1L2Q9ULW6 460 aaPredicted RBP12.42□□□□□ -0.42
SHROOM3-210ENST00000497440 GRXCR1A8MXD5 290 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 IPO5O00410 1097 aaKnown RBP12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 PPFIA3O75145 1194 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 GNAT1P11488 350 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 DNAJB2P25686 324 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 SLC26A2P50443 739 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 ST3GAL1Q11201 340 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 TCTN1Q2MV58 587 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 PLEKHG4Q58EX7 1191 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 CPLX2Q6PUV4 134 aaKnown RBP12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 RASGRP4Q8TDF6 673 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 ATP6V0A1Q93050 837 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 GTF3C6Q969F1 213 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 AIFM3Q96NN9 605 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 PHF20Q9BVI0 1012 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 C22orf23Q9BZE7 217 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 TBC1D22BQ9NU19 505 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 NOD1Q9Y239 953 aa12.41□□□□□ -0.42
SHROOM3-210ENST00000497440 MAFBQ9Y5Q3 323 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms