RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 SLC6A20Q9NP91 592 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 MYOTQ9UBF9 498 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 PCDHA9Q9Y5H5 950 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 PCDHA8Q9Y5H6 950 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 PMF1-BGLAPU3KQ54 211 aa5.64□□□□□ -1.51
SMC4-225ENST00000497203 GSG1L2A8MUP6 293 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 FAM47E-STBD1D6RA91 191 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 KRIT1O00522 736 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 FFAR3O14843 346 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 SLC27A2O14975 620 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 NKRFO15226 690 aaKnown RBP eCLIP5.63□□□□□ -1.51
SMC4-225ENST00000497203 DNAJC8O75937 253 aaPredicted RBP5.63□□□□□ -1.51
SMC4-225ENST00000497203 NPTXRO95502 500 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 CRTAMO95727 393 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 GNAT1P11488 350 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 CPEP16870 476 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 POU3F2P20265 443 aaPredicted RBP5.63□□□□□ -1.51
SMC4-225ENST00000497203 GUCY1A3Q02108 690 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 VWA3BQ502W6 1294 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 HABP4Q5JVS0 413 aaKnown RBP5.63□□□□□ -1.51
SMC4-225ENST00000497203 CD300LDQ6UXZ3 194 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 UBE2R2Q712K3 238 aaPredicted RBP5.63□□□□□ -1.51
SMC4-225ENST00000497203 TMEM151BQ8IW70 566 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 PCDH19Q8TAB3 1148 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 DDX1Q92499 740 aaKnown RBP5.63□□□□□ -1.51
SMC4-225ENST00000497203 GORASP1Q9BQQ3 440 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 SMOC1Q9H4F8 434 aa5.63□□□□□ -1.51
SMC4-225ENST00000497203 ARVCFO00192 962 aa5.62□□□□□ -1.51
SMC4-225ENST00000497203 CYP2C8P10632 490 aa5.62□□□□□ -1.51
SMC4-225ENST00000497203 DLX2Q07687 328 aaPredicted RBP5.62□□□□□ -1.51
SMC4-225ENST00000497203 SPIRE1Q08AE8 756 aa5.62□□□□□ -1.51
SMC4-225ENST00000497203 PAK1Q13153 545 aa5.62□□□□□ -1.51
SMC4-225ENST00000497203 CR1LQ2VPA4 569 aa5.62□□□□□ -1.51
SMC4-225ENST00000497203 CYP4F22Q6NT55 531 aa5.62□□□□□ -1.51
SMC4-225ENST00000497203 FGD2Q7Z6J4 655 aa5.62□□□□□ -1.51
SMC4-225ENST00000497203 ADGRG2Q8IZP9 1017 aa5.62□□□□□ -1.51
SMC4-225ENST00000497203 TP53I13Q8NBR0 393 aaPredicted RBP5.62□□□□□ -1.51
SMC4-225ENST00000497203 YIPF4Q9BSR8 244 aa5.62□□□□□ -1.51
SMC4-225ENST00000497203 TARS2Q9BW92 718 aaKnown RBP5.62□□□□□ -1.51
SMC4-225ENST00000497203 ASH2LQ9UBL3 628 aa5.62□□□□□ -1.51
SMC4-225ENST00000497203 TNPO3Q9Y5L0 923 aaKnown RBP5.62□□□□□ -1.51
SMC4-225ENST00000497203 A0A1B0GTL3 188 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 TCRBV16S1A1N1A0A5B0 115 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 WNT9AO14904 365 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 MAFKO60675 156 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 TRIM13O60858 407 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 RASGRP1O95267 797 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 LTFP02788 710 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 INHBBP09529 407 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 SRGAP2CP0DJJ0 459 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 NEK4P51957 841 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 AMPD3Q01432 767 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 SMAD4Q13485 552 aaKnown RBP5.61□□□□□ -1.51
SMC4-225ENST00000497203 RNF180Q86T96 592 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 DDX53Q86TM3 631 aaKnown RBP5.61□□□□□ -1.51
SMC4-225ENST00000497203 SAPCD2Q86UD0 394 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 STK32CQ86UX6 486 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 ZC3H18Q86VM9 953 aaKnown RBP5.61□□□□□ -1.51
SMC4-225ENST00000497203 UHMK1Q8TAS1 419 aaKnown RBP5.61□□□□□ -1.51
SMC4-225ENST00000497203 PHOSPHO1Q8TCT1 267 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 ZNF526Q8TF50 670 aaPredicted RBP5.61□□□□□ -1.51
SMC4-225ENST00000497203 CLEC4DQ8WXI8 215 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 SCLYQ96I15 445 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 DTLQ9NZJ0 730 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 MCM8Q9UJA3 840 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 TELO2Q9Y4R8 837 aa5.61□□□□□ -1.51
SMC4-225ENST00000497203 TCRBV5S4A2TA0A5A2 114 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 GSTA4O15217 222 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 LRG1P02750 347 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 JMJD7P0C870 316 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 PYGMP11217 842 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 ITGA1P56199 1179 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 CAP1Q01518 475 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 GRIN1Q05586 938 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 TUSC3Q13454 348 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 CFAP100Q494V2 611 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 ZCCHC8Q6NZY4 707 aaKnown RBP5.6□□□□□ -1.51
SMC4-225ENST00000497203 TEPPQ6URK8 271 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 DDX46Q7L014 1031 aaKnown RBP5.6□□□□□ -1.51
SMC4-225ENST00000497203 LINC00482Q8N8I6 264 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 LINC01356Q8N9X3 169 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 SH3RF2Q8TEC5 729 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 FBXW5Q969U6 566 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 ZBTB8AQ96BR9 441 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 TOE1Q96GM8 510 aaKnown RBP5.6□□□□□ -1.51
SMC4-225ENST00000497203 C11orf84Q9BUA3 381 aaPredicted RBP5.6□□□□□ -1.51
SMC4-225ENST00000497203 CD244Q9BZW8 370 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 SPATA6Q9NWH7 488 aaPredicted RBP5.6□□□□□ -1.51
SMC4-225ENST00000497203 DSEQ9UL01 958 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 CBLCQ9ULV8 474 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 WASF3Q9UPY6 502 aa5.6□□□□□ -1.51
SMC4-225ENST00000497203 BMP7P18075 431 aa5.59□□□□□ -1.51
SMC4-225ENST00000497203 NKX3-2P78367 333 aa5.59□□□□□ -1.51
SMC4-225ENST00000497203 NFKB2Q00653 900 aa5.59□□□□□ -1.51
SMC4-225ENST00000497203 FAM47CQ5HY64 1035 aa5.59□□□□□ -1.51
SMC4-225ENST00000497203 ZC3H7AQ8IWR0 971 aaKnown RBP5.59□□□□□ -1.51
SMC4-225ENST00000497203 TRIM48Q8IWZ4 208 aa5.59□□□□□ -1.51
SMC4-225ENST00000497203 TTLL11Q8NHH1 800 aa5.59□□□□□ -1.51
SMC4-225ENST00000497203 TYW1Q9NV66 732 aaKnown RBP5.59□□□□□ -1.51
SMC4-225ENST00000497203 RBPJLQ9UBG7 517 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms