RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 GTF2F1P35269 517 aaKnown RBP eCLIP5.18□□□□□ -1.58
VPS26A-208ENST00000497022 TGFB2P61812 414 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 PPP2CBP62714 309 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 PPP2CAP67775 309 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 SLFN13Q68D06 897 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 STYK1Q6J9G0 422 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 LBX2Q6XYB7 198 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 PHOSPHO1Q8TCT1 267 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 IGDCC4Q8TDY8 1250 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 MBD6Q96DN6 1003 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 TOE1Q96GM8 510 aaKnown RBP5.18□□□□□ -1.58
VPS26A-208ENST00000497022 ZFYVE21Q9BQ24 234 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 SLC6A20Q9NP91 592 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 DTLQ9NZJ0 730 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 SIRPGQ9P1W8 387 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 MYOTQ9UBF9 498 aa5.18□□□□□ -1.58
VPS26A-208ENST00000497022 ING1Q9UK53 422 aaPredicted RBP5.18□□□□□ -1.58
VPS26A-208ENST00000497022 CCDC85CA6NKD9 419 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 KRIT1O00522 736 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 ADCY3O60266 1144 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 MAFKO60675 156 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 GPR85P60893 370 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 RBL2Q08999 1139 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 ADAM9Q13443 819 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 SMN1Q16637 294 aaKnown RBP5.17□□□□□ -1.58
VPS26A-208ENST00000497022 KIZQ2M2Z5 673 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 MTERF2Q49AM1 385 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 SPDYAQ5MJ70 313 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 PRAMEF18Q5VWM3 479 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 ARHGEF18Q6ZSZ5 1173 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 IFNL3Q8IZI9 196 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 PIP4K2CQ8TBX8 421 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 YTHDC1Q96MU7 727 aaKnown RBP5.17□□□□□ -1.58
VPS26A-208ENST00000497022 WWC2-AS2Q96NR7 200 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 HIRIP3Q9BW71 556 aaPredicted RBP5.17□□□□□ -1.58
VPS26A-208ENST00000497022 ASH2LQ9UBL3 628 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 PFDN2Q9UHV9 154 aa5.17□□□□□ -1.58
VPS26A-208ENST00000497022 ASXL2Q76L83 1435 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 CYP7B1O75881 506 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 LRG1P02750 347 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 SSRP1Q08945 709 aaKnown RBP5.16□□□□□ -1.58
VPS26A-208ENST00000497022 FHL2Q14192 279 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 CYP4F22Q6NT55 531 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 TEPPQ6URK8 271 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 DPH6Q7L8W6 267 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 OTOP3Q7RTS5 596 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 SCUBE1Q8IWY4 988 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 TRIM48Q8IWZ4 208 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 ZBTB38Q8NAP3 1195 aaPredicted RBP5.16□□□□□ -1.58
VPS26A-208ENST00000497022 ARMC5Q96C12 935 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 TMEM168Q9H0V1 697 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 L2HGDHQ9H9P8 463 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 C11orf21Q9P2W6 132 aa5.16□□□□□ -1.58
VPS26A-208ENST00000497022 SLC27A2O14975 620 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 ZNF623O75123 536 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 COL6A2P12110 1019 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 GRK2P25098 689 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 GRK3P35626 688 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 INHBEP58166 350 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 SERINC3Q13530 473 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 FOXB2Q5VYV0 432 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.15□□□□□ -1.59
VPS26A-208ENST00000497022 CLEC4DQ8WXI8 215 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 WRNIP1Q96S55 665 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 KCNJ15Q99712 375 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 JADE2Q9NQC1 790 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 HSPBP1Q9NZL4 362 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 WASF3Q9UPY6 502 aa5.15□□□□□ -1.59
VPS26A-208ENST00000497022 WDR33Q9C0J8 1336 aaKnown RBP5.15□□□□□ -1.59
VPS26A-208ENST00000497022 TRBV23-1A0A0A0MS06 115 aa5.14□□□□□ -1.59
VPS26A-208ENST00000497022 DIAPH1O60610 1272 aaKnown RBP5.14□□□□□ -1.59
VPS26A-208ENST00000497022 SOD2P04179 222 aa5.14□□□□□ -1.59
VPS26A-208ENST00000497022 SPIRE1Q08AE8 756 aa5.14□□□□□ -1.59
VPS26A-208ENST00000497022 HABP4Q5JVS0 413 aaKnown RBP5.14□□□□□ -1.59
VPS26A-208ENST00000497022 FAM209AQ5JX71 171 aa5.14□□□□□ -1.59
VPS26A-208ENST00000497022 RBM12BQ8IXT5 1001 aaKnown RBP5.14□□□□□ -1.59
VPS26A-208ENST00000497022 KBTBD2Q8IY47 623 aa5.14□□□□□ -1.59
VPS26A-208ENST00000497022 KLHL36Q8N4N3 616 aa5.14□□□□□ -1.59
VPS26A-208ENST00000497022 CDC6Q99741 560 aa5.14□□□□□ -1.59
VPS26A-208ENST00000497022 ZNF341Q9BYN7 854 aa5.14□□□□□ -1.59
VPS26A-208ENST00000497022 IPPKQ9H8X2 491 aa5.14□□□□□ -1.59
VPS26A-208ENST00000497022 TRAF6Q9Y4K3 522 aa5.14□□□□□ -1.59
VPS26A-208ENST00000497022 FAM221BA6H8Z2 402 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 FAM47E-STBD1D6RA91 191 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 NKRFO15226 690 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS26A-208ENST00000497022 FAM153BP0C7A2 387 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 GNAT1P11488 350 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 IL13P35225 146 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 GRIN1Q05586 938 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 TUSC3Q13454 348 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 RASA3Q14644 834 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 HS1BP3Q53T59 392 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 MAMDC2Q7Z304 686 aaPredicted RBP5.13□□□□□ -1.59
VPS26A-208ENST00000497022 LRP10Q7Z4F1 713 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 ZNF575Q86XF7 245 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 AMER2Q8N7J2 671 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 TTLL11Q8NHH1 800 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 UHMK1Q8TAS1 419 aaKnown RBP5.13□□□□□ -1.59
VPS26A-208ENST00000497022 PTPRN2Q92932 1015 aa5.13□□□□□ -1.59
VPS26A-208ENST00000497022 CLIC6Q96NY7 704 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms