RNA–Protein interactions for RNA: ENST00000496722.1

UBE2L3-203, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2

Gene UBE2L3, Length 3,451 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-203ENST00000496722 PABPC4Q13310 644 aaKnown RBP eCLIP15.58■□□□□ 0.082e-45■■□□□ 11.9
UBE2L3-203ENST00000496722 NAB2Q15742 525 aa15.58■□□□□ 0.08
UBE2L3-203ENST00000496722 TMEM119Q4V9L6 283 aa15.58■□□□□ 0.08
UBE2L3-203ENST00000496722 TCERG1LQ5VWI1 586 aa15.58■□□□□ 0.08
UBE2L3-203ENST00000496722 NAA35Q5VZE5 725 aa15.58■□□□□ 0.08
UBE2L3-203ENST00000496722 ZNF571Q7Z3V5 609 aaPredicted RBP15.58■□□□□ 0.08
UBE2L3-203ENST00000496722 CEP72Q9P209 647 aa15.58■□□□□ 0.08
UBE2L3-203ENST00000496722 CCNL1Q9UK58 526 aaPredicted RBP15.58■□□□□ 0.08
UBE2L3-203ENST00000496722 DDX60LQ5H9U9 1706 aaKnown RBP15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 STRCQ7RTU9 1775 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 GPR75-ASB3A0A0A6YYF3 556 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 RSPH10B2B2RC85 870 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 C6orf229H3BNL8 230 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 CEP104O60308 925 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 OPA1O60313 960 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 MED24O75448 989 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 RSPH10BP0C881 870 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 ITGA4P13612 1032 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 RFC4P35249 363 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 CYP4A11Q02928 519 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 CEP85LQ5SZL2 805 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 EMBQ6PCB8 327 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 ZNF572Q7Z3I7 529 aaPredicted RBP15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 IFT20Q8IY31 132 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 DDX47Q9H0S4 455 aaKnown RBP15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 NEUROG2Q9H2A3 272 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 CLIC2O15247 247 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 RPS6KA4O75676 772 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 LDHCP07864 332 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 COPB2P35606 906 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 EMILIN3Q9NT22 766 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 POLLQ9UGP5 575 aa15.57■□□□□ 0.08
UBE2L3-203ENST00000496722 SHTN1A0MZ66 631 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 MYO1FO00160 1098 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 ERLIN2O94905 339 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 FGFR1OPO95684 399 aaKnown RBP15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 POLD1P28340 1107 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 ERVK-9P63128 1117 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 SLC18A3Q16572 532 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 ARSHQ5FYA8 562 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 MEI1Q5TIA1 1274 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 KSR1Q8IVT5 923 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 IQCKQ8N0W5 287 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 TRIM31Q9BZY9 425 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 PLAAQ9Y263 795 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 PCDHAC2Q9Y5I4 1007 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 NR2F2P24468 414 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 INPP4AQ96PE3 977 aaPredicted RBP15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 P2RX7Q99572 595 aaKnown RBP15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 PSTPIP2Q9H939 334 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 GDF3Q9NR23 364 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 IBSPP21815 317 aaPredicted RBP15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 CASP4P49662 377 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 ASIC2Q16515 512 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 TRIM59Q8IWR1 403 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 RAB34Q9BZG1 259 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 ZNF287Q9HBT7 754 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 PPANQ9NQ55 473 aaKnown RBP15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 PCDHA2Q9Y5H9 948 aa15.56■□□□□ 0.08
UBE2L3-203ENST00000496722 SSU72P8A0A1W2PR75 194 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 ZFPM1Q8IX07 1006 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 EFCAB13Q8IY85 973 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 CNBD1Q8NA66 436 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 RBM46Q8TBY0 533 aaKnown RBP15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 CAVIN3Q969G5 261 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 CDCA7Q9BWT1 371 aaPredicted RBP15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 CELF4Q9BZC1 486 aaKnown RBP15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 DAGLAQ9Y4D2 1042 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 MYBP10242 640 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 CYP11B2P19099 503 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 TMOD1P28289 359 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 PPP1R2P41236 205 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 RREB1Q92766 1687 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 LSP1P33241 339 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 GTF2A1P52655 376 aaPredicted RBP15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 PDIA5Q14554 519 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 COBLL1Q53SF7 1204 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 RPGRQ92834 1020 aaKnown RBP15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 SPAG5Q96R06 1193 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 KCTD10Q9H3F6 313 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 RIC8AQ9NPQ8 531 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 LEMD3Q9Y2U8 911 aa15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 TNRC6CQ9HCJ0 1690 aaKnown RBP15.55■□□□□ 0.08
UBE2L3-203ENST00000496722 HDLBPQ00341 1268 aaKnown RBP15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 ALS2CLQ60I27 953 aa15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 GANQ9H2C0 597 aa15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 HDAC9Q9UKV0 1011 aa15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 NAV1Q8NEY1 1877 aa15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 A0A087WUV0 522 aaPredicted RBP15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 DCDC2CA8MYV0 355 aa15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 TCP10Q12799 353 aa15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 USH1GQ495M9 461 aa15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 PRR16Q569H4 304 aa15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 USP38Q8NB14 1042 aa15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 CYP2W1Q8TAV3 490 aa15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.54■□□□□ 0.082e-7■■■■■ 76.7
UBE2L3-203ENST00000496722 AMACRQ9UHK6 382 aa15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 CAPN7Q9Y6W3 813 aa15.54■□□□□ 0.08
UBE2L3-203ENST00000496722 ZBTB39O15060 712 aa15.53■□□□□ 0.08
UBE2L3-203ENST00000496722 NR1D1P20393 614 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms