RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SLC16A10Q8TF71 515 aa14.43□□□□□ -0.1
GARNL3-220ENST00000496711 EIF2AK1Q9BQI3 630 aaKnown RBP14.43□□□□□ -0.1
GARNL3-220ENST00000496711 WDR18Q9BV38 432 aa14.43□□□□□ -0.1
GARNL3-220ENST00000496711 EDEM3Q9BZQ6 932 aa14.43□□□□□ -0.1
GARNL3-220ENST00000496711 FEM1BQ9UK73 627 aa14.43□□□□□ -0.1
GARNL3-220ENST00000496711 ASNSP08243 561 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 CYP4A11Q02928 519 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 TMCO3Q6UWJ1 677 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 ARHGAP27Q6ZUM4 889 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 SFR1Q86XK3 245 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 CCDC42Q96M95 316 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 PGAP2Q9UHJ9 254 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 RABGAP1Q9Y3P9 1069 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 LRRC53A6NM62 1247 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 EML1O00423 815 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 EYA4O95677 639 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 ERCC3P19447 782 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 VAV2P52735 878 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 AMPD2Q01433 879 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 CXCL9Q07325 125 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 SF3B2Q13435 895 aaKnown RBP14.42□□□□□ -0.1
GARNL3-220ENST00000496711 LRCH2Q5VUJ6 765 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 TRIM59Q8IWR1 403 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 TBC1D5Q92609 795 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 SLC5A5Q92911 643 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 TSGA10Q9BZW7 698 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 BHMT2Q9H2M3 363 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 TUFT1Q9NNX1 390 aa14.42□□□□□ -0.1
GARNL3-220ENST00000496711 PARP14Q460N5 1801 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 DOCK1Q14185 1865 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 WNT10BO00744 389 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 TBCAO75347 108 aaKnown RBP14.41□□□□□ -0.1
GARNL3-220ENST00000496711 PSMD10O75832 226 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 CASP5P51878 434 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 TUBB4BP68371 445 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 MAP3K10Q02779 954 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 PPP2R5CQ13362 524 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 SPA17Q15506 151 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 PDXDC1Q6P996 788 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 EPM2AIP1Q7L775 607 aaPredicted RBP14.41□□□□□ -0.1
GARNL3-220ENST00000496711 CACNA2D4Q7Z3S7 1137 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 BAP1Q92560 729 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 GLIS2Q9BZE0 524 aaPredicted RBP14.41□□□□□ -0.1
GARNL3-220ENST00000496711 ARHGAP20Q9P2F6 1191 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 PUF60Q9UHX1 559 aaKnown RBP14.41□□□□□ -0.1
GARNL3-220ENST00000496711 FAM184BQ9ULE4 1060 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 MYO6Q9UM54 1294 aa14.41□□□□□ -0.1
GARNL3-220ENST00000496711 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.41□□□□□ -0.1
GARNL3-220ENST00000496711 CETN3O15182 167 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 PLEKP08567 350 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-220ENST00000496711 KIF11P52732 1056 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 SETQ01105 290 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-220ENST00000496711 KCNMA1Q12791 1236 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 ADAM9Q13443 819 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 BMS1Q14692 1282 aaKnown RBP14.4□□□□□ -0.1
GARNL3-220ENST00000496711 NBPF9Q3BBW0 867 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 CIAPIN1Q6FI81 312 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 RRAGAQ7L523 313 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 OTOP1Q7RTM1 612 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 LDHDQ86WU2 507 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 KRT222Q8N1A0 295 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 CCDC155Q8N6L0 562 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 SMCR8Q8TEV9 937 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-220ENST00000496711 PURBQ96QR8 312 aaKnown RBP14.4□□□□□ -0.1
GARNL3-220ENST00000496711 RUSC1Q9BVN2 902 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 EPC1Q9H2F5 836 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 ZSWIM4Q9H7M6 989 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 MYOZ2Q9NPC6 264 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 FAM53CQ9NYF3 392 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 CEP72Q9P209 647 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 TFR2Q9UP52 801 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 TRAF3IP3Q9Y228 551 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 RCCD1A6NED2 376 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 GAS7O60861 476 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 LCA5LO95447 670 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 ZSCAN20P17040 1043 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-220ENST00000496711 NR2F2P24468 414 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 PRELPP51888 382 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 CYP27A1Q02318 531 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 KIF5AQ12840 1032 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 KNOP1Q1ED39 458 aaKnown RBP14.4□□□□□ -0.1
GARNL3-220ENST00000496711 BMT2Q1RMZ1 405 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 CEP55Q53EZ4 464 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 SAMD1Q6SPF0 538 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-220ENST00000496711 DEFB132Q7Z7B7 95 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 SMAP1Q8IYB5 467 aaPredicted RBP14.4□□□□□ -0.1
GARNL3-220ENST00000496711 LACRTQ9GZZ8 138 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 NUCKS1Q9H1E3 243 aaKnown RBP14.4□□□□□ -0.1
GARNL3-220ENST00000496711 DEF6Q9H4E7 631 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 FBXO28Q9NVF7 368 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 RGL1Q9NZL6 768 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 PIM2Q9P1W9 311 aa14.4□□□□□ -0.1
GARNL3-220ENST00000496711 CTAGE15A4D2H0 777 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 POTEB2H3BUK9 544 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 ZNF263O14978 683 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 CHMP2AO43633 222 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 CALUO43852 315 aaPredicted RBP14.39□□□□□ -0.11
GARNL3-220ENST00000496711 ZRANB2O95218 330 aaKnown RBP eCLIP14.39□□□□□ -0.11
GARNL3-220ENST00000496711 CTAGE8P0CG41 777 aa14.39□□□□□ -0.11
GARNL3-220ENST00000496711 GAP43P17677 238 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms