RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 TTC12Q9H892 705 aaPredicted RBP6.9□□□□□ -1.3
SSBP1-213ENST00000496622 TCP11L1Q9NUJ3 509 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 OGFRQ9NZT2 677 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 SERPINA10Q9UK55 444 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 GJA3Q9Y6H8 435 aa6.9□□□□□ -1.3
SSBP1-213ENST00000496622 A0A1W2PQ27 194 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 A0A1W2PQ64 194 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 A0A1W2PQD8 194 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 SMCO2A6NFE2 343 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 WNT10BO00744 389 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 MAP2K2P36507 400 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 MCCD1P59942 119 aaPredicted RBP6.9□□□□□ -1.31
SSBP1-213ENST00000496622 CCDC173Q0VFZ6 552 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 CBLBQ13191 982 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 LAPTM4AQ15012 233 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 PPP2R5BQ15173 497 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 UBE2SQ16763 222 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 KIAA1755Q5JYT7 1200 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 KCNV1Q6PIU1 500 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 RBM43Q6ZSC3 357 aaKnown RBP6.9□□□□□ -1.31
SSBP1-213ENST00000496622 METTL16Q86W50 562 aaKnown RBP6.9□□□□□ -1.31
SSBP1-213ENST00000496622 MYLK4Q86YV6 388 aaPredicted RBP6.9□□□□□ -1.31
SSBP1-213ENST00000496622 IQCF2Q8IXL9 164 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 BLIDQ8IZY5 108 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 MYRIPQ8NFW9 859 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 FAM200AQ8TCP9 573 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 ACER1Q8TDN7 264 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 DHX58Q96C10 678 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 PPP1R9BQ96SB3 815 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 GMLQ99445 158 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 FEZ1Q99689 392 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 GABBR1Q9UBS5 961 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 SERTAD1Q9UHV2 236 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 BLOC1S6Q9UL45 172 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 PCDHA6Q9UN73 950 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 PCDHA8Q9Y5H6 950 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 KIAA1551Q9HCM1 1747 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 NRXN2Q9P2S2 1712 aa6.9□□□□□ -1.31
SSBP1-213ENST00000496622 LRRC37AA6NMS7 1700 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 PPP6R2O75170 966 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 VIL1P09327 827 aaKnown RBP6.89□□□□□ -1.31
SSBP1-213ENST00000496622 TIMP2P16035 220 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 BMP6P22004 513 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 SLC7A5Q01650 507 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 LETM2Q2VYF4 491 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 TBC1D10BQ4KMP7 808 aaPredicted RBP6.89□□□□□ -1.31
SSBP1-213ENST00000496622 TTC38Q5R3I4 469 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 RESP18Q5W5W9 173 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 NIM1KQ8IY84 436 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 ADGRF4Q8IZF3 695 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 CNNM3Q8NE01 707 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 PDLIM2Q96JY6 352 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 IDI2Q9BXS1 227 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 LRRC27Q9C0I9 530 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 TAOK3Q9H2K8 898 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 JMJD4Q9H9V9 463 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 NMRK2Q9NPI5 230 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 BARHL2Q9NY43 387 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 CPSF2Q9P2I0 782 aaKnown RBP6.89□□□□□ -1.31
SSBP1-213ENST00000496622 ZNF70Q9UC06 446 aaPredicted RBP6.89□□□□□ -1.31
SSBP1-213ENST00000496622 ZNRF3Q9ULT6 936 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 HPSEQ9Y251 543 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 DIS3Q9Y2L1 958 aaKnown RBP6.89□□□□□ -1.31
SSBP1-213ENST00000496622 PCDHA5Q9Y5H7 936 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 ARFGEF1Q9Y6D6 1849 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 CCDC88AQ3V6T2 1871 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 DDX60LQ5H9U9 1706 aaKnown RBP6.89□□□□□ -1.31
SSBP1-213ENST00000496622 IGKV6D-41A0A0C4DH26 115 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 USP17L15C9J2P7 530 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 USP17L13C9JLJ4 530 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 USP17L11C9JVI0 530 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 USP17L18D6R9N7 530 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 USP17L22D6RA61 530 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 USP17L17D6RBQ6 530 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 USP17L19D6RCP7 530 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 USP17L20D6RJB6 530 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 ZIC2O95409 532 aaPredicted RBP6.89□□□□□ -1.31
SSBP1-213ENST00000496622 SLC1A4P43007 532 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 ICA1Q05084 483 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 ADCY2Q08462 1091 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 USP17L24Q0WX57 530 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 USH1GQ495M9 461 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 AP1ARQ63HQ0 302 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 USP17L6PQ6QN14 398 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 SMYD4Q8IYR2 804 aaPredicted RBP6.89□□□□□ -1.31
SSBP1-213ENST00000496622 JDP2Q8WYK2 163 aa6.89□□□□□ -1.31
SSBP1-213ENST00000496622 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.89□□□□□ -1.31
SSBP1-213ENST00000496622 DNAH12Q6ZR08 3092 aa6.88□□□□□ -1.31
SSBP1-213ENST00000496622 CCDC194A0A1B0GVG4 234 aa6.88□□□□□ -1.31
SSBP1-213ENST00000496622 CFAP69A5D8W1 941 aa6.88□□□□□ -1.31
SSBP1-213ENST00000496622 F5H6K3 240 aa6.88□□□□□ -1.31
SSBP1-213ENST00000496622 KLRC3Q07444 240 aa6.88□□□□□ -1.31
SSBP1-213ENST00000496622 ZNF543Q08ER8 600 aa6.88□□□□□ -1.31
SSBP1-213ENST00000496622 IKQ13123 557 aaPredicted RBP6.88□□□□□ -1.31
SSBP1-213ENST00000496622 ABCB5Q2M3G0 1257 aa6.88□□□□□ -1.31
SSBP1-213ENST00000496622 TBC1D25Q3MII6 688 aa6.88□□□□□ -1.31
SSBP1-213ENST00000496622 PPP1R26Q5T8A7 1209 aaPredicted RBP6.88□□□□□ -1.31
SSBP1-213ENST00000496622 SLC30A10Q6XR72 485 aa6.88□□□□□ -1.31
SSBP1-213ENST00000496622 C10orf67Q8IYJ2 551 aa6.88□□□□□ -1.31
SSBP1-213ENST00000496622 AOPEPQ8N6M6 819 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms