RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 SEPT1Q8WYJ6 367 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 CENPFP49454 3210 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 TCHHQ07283 1943 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 A6NJR5 290 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 CHMP2AO43633 222 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 CCNE2O96020 404 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 C6orf222P0C671 652 aaPredicted RBP24.5■■□□□ 1.51
C9orf3-222ENST00000496567 NKX3-2P78367 333 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 SPIRE1Q08AE8 756 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 MIER3Q7Z3K6 550 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 GPR20Q99678 358 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 FBXO2Q9UK22 296 aaPredicted RBP24.5■■□□□ 1.51
C9orf3-222ENST00000496567 SAMM50Q9Y512 469 aa24.5■■□□□ 1.51
C9orf3-222ENST00000496567 PGK1P00558 417 aa24.49■■□□□ 1.51
C9orf3-222ENST00000496567 LONP1P36776 959 aaKnown RBP24.49■■□□□ 1.51
C9orf3-222ENST00000496567 IL17AQ16552 155 aa24.49■■□□□ 1.51
C9orf3-222ENST00000496567 FSCN1Q16658 493 aaKnown RBP24.49■■□□□ 1.51
C9orf3-222ENST00000496567 NCAPH2Q6IBW4 605 aa24.49■■□□□ 1.51
C9orf3-222ENST00000496567 IGSF22Q8N9C0 903 aa24.49■■□□□ 1.51
C9orf3-222ENST00000496567 DEFB118Q96PH6 123 aa24.49■■□□□ 1.51
C9orf3-222ENST00000496567 DISC1Q9NRI5 854 aa24.49■■□□□ 1.51
C9orf3-222ENST00000496567 LRWD1Q9UFC0 647 aa24.49■■□□□ 1.51
C9orf3-222ENST00000496567 PCDHA10Q9Y5I2 948 aa24.49■■□□□ 1.51
C9orf3-222ENST00000496567 POTEFA5A3E0 1075 aa24.48■■□□□ 1.51
C9orf3-222ENST00000496567 ADAMTS4O75173 837 aa24.48■■□□□ 1.51
C9orf3-222ENST00000496567 PPFIA4O75335 1185 aa24.48■■□□□ 1.51
C9orf3-222ENST00000496567 ATG7O95352 703 aa24.48■■□□□ 1.51
C9orf3-222ENST00000496567 ME1P48163 572 aa24.48■■□□□ 1.51
C9orf3-222ENST00000496567 DGKDQ16760 1214 aa24.48■■□□□ 1.51
C9orf3-222ENST00000496567 CSPP1Q1MSJ5 1256 aa24.48■■□□□ 1.51
C9orf3-222ENST00000496567 MIS18BP1Q6P0N0 1132 aa24.48■■□□□ 1.51
C9orf3-222ENST00000496567 RNF180Q86T96 592 aa24.48■■□□□ 1.51
C9orf3-222ENST00000496567 AK8Q96MA6 479 aa24.48■■□□□ 1.51
C9orf3-222ENST00000496567 STK24Q9Y6E0 443 aa24.48■■□□□ 1.51
C9orf3-222ENST00000496567 GSTTP1A0A1W2PQM5 241 aa24.47■■□□□ 1.51
C9orf3-222ENST00000496567 POTEMA6NI47 508 aa24.47■■□□□ 1.51
C9orf3-222ENST00000496567 ZEB2O60315 1214 aa24.47■■□□□ 1.51
C9orf3-222ENST00000496567 PSAPP07602 524 aa24.47■■□□□ 1.51
C9orf3-222ENST00000496567 GJB1P08034 283 aa24.47■■□□□ 1.51
C9orf3-222ENST00000496567 MMP3P08254 477 aa24.47■■□□□ 1.51
C9orf3-222ENST00000496567 GNASQ5JWF2 1037 aa24.47■■□□□ 1.51
C9orf3-222ENST00000496567 ABHD15Q6UXT9 468 aa24.47■■□□□ 1.51
C9orf3-222ENST00000496567 CLEC17AQ6ZS10 378 aa24.47■■□□□ 1.51
C9orf3-222ENST00000496567 ARRDC4Q8NCT1 418 aa24.47■■□□□ 1.51
C9orf3-222ENST00000496567 ERMNQ8TAM6 284 aa24.47■■□□□ 1.51
C9orf3-222ENST00000496567 CUTAO60888 179 aa24.46■■□□□ 1.51
C9orf3-222ENST00000496567 CST5P28325 142 aaPredicted RBP24.46■■□□□ 1.51
C9orf3-222ENST00000496567 TCF7P36402 384 aaPredicted RBP24.46■■□□□ 1.51
C9orf3-222ENST00000496567 EPHA7Q15375 998 aa24.46■■□□□ 1.51
C9orf3-222ENST00000496567 TMEM106CQ9BVX2 250 aa24.46■■□□□ 1.51
C9orf3-222ENST00000496567 GDPD2Q9HCC8 539 aa24.46■■□□□ 1.51
C9orf3-222ENST00000496567 EML1O00423 815 aa24.46■■□□□ 1.51
C9orf3-222ENST00000496567 CTAGE5O15320 804 aa24.46■■□□□ 1.51
C9orf3-222ENST00000496567 KPNA6O60684 536 aa24.46■■□□□ 1.51
C9orf3-222ENST00000496567 SUPT20HL2P0C7V6 817 aa24.46■■□□□ 1.51
C9orf3-222ENST00000496567 HOXD8P13378 290 aaPredicted RBP24.46■■□□□ 1.51
C9orf3-222ENST00000496567 PCSK9Q8NBP7 692 aaKnown RBP24.46■■□□□ 1.51
C9orf3-222ENST00000496567 KLHDC9Q8NEP7 349 aa24.46■■□□□ 1.51
C9orf3-222ENST00000496567 GBP4Q96PP9 640 aa24.46■■□□□ 1.51
C9orf3-222ENST00000496567 PCDHA7Q9UN72 937 aa24.46■■□□□ 1.51
C9orf3-222ENST00000496567 TELO2Q9Y4R8 837 aa24.46■■□□□ 1.51
C9orf3-222ENST00000496567 FRMPD3Q5JV73 1810 aa24.45■■□□□ 1.5
C9orf3-222ENST00000496567 SGPL1O95470 568 aa24.45■■□□□ 1.5
C9orf3-222ENST00000496567 CAPN2P17655 700 aa24.45■■□□□ 1.5
C9orf3-222ENST00000496567 BEX3Q00994 111 aa24.45■■□□□ 1.5
C9orf3-222ENST00000496567 GRIN1Q05586 938 aa24.45■■□□□ 1.5
C9orf3-222ENST00000496567 LRRC41Q15345 812 aa24.45■■□□□ 1.5
C9orf3-222ENST00000496567 HAUS3Q68CZ6 603 aa24.45■■□□□ 1.5
C9orf3-222ENST00000496567 ZNF579Q8NAF0 562 aaKnown RBP24.45■■□□□ 1.5
C9orf3-222ENST00000496567 NEK9Q8TD19 979 aa24.45■■□□□ 1.5
C9orf3-222ENST00000496567 CLIC6Q96NY7 704 aa24.45■■□□□ 1.5
C9orf3-222ENST00000496567 CSRNP2Q9H175 543 aa24.45■■□□□ 1.5
C9orf3-222ENST00000496567 AZI2Q9H6S1 392 aa24.45■■□□□ 1.5
C9orf3-222ENST00000496567 OGDHLQ9ULD0 1010 aa24.45■■□□□ 1.5
C9orf3-222ENST00000496567 MYADML2A6NDP7 307 aa24.44■■□□□ 1.5
C9orf3-222ENST00000496567 BACH1O14867 736 aa24.44■■□□□ 1.5
C9orf3-222ENST00000496567 MYCNP04198 464 aaPredicted RBP24.44■■□□□ 1.5
C9orf3-222ENST00000496567 FAM160B1Q5W0V3 765 aa24.44■■□□□ 1.5
C9orf3-222ENST00000496567 KRT79Q5XKE5 535 aa24.44■■□□□ 1.5
C9orf3-222ENST00000496567 U2AF1L4Q8WU68 220 aaKnown RBP24.44■■□□□ 1.5
C9orf3-222ENST00000496567 IGKV6D-21A0A0A0MT36 114 aa24.43■■□□□ 1.5
C9orf3-222ENST00000496567 P4HBP07237 508 aaKnown RBP24.43■■□□□ 1.5
C9orf3-222ENST00000496567 IRX5P78411 483 aaPredicted RBP24.43■■□□□ 1.5
C9orf3-222ENST00000496567 COL13A1Q5TAT6 717 aaPredicted RBP24.43■■□□□ 1.5
C9orf3-222ENST00000496567 SWSAP1Q6NVH7 229 aa24.43■■□□□ 1.5
C9orf3-222ENST00000496567 EIF2AK1Q9BQI3 630 aaKnown RBP24.43■■□□□ 1.5
C9orf3-222ENST00000496567 TSEN34Q9BSV6 310 aaKnown RBP24.43■■□□□ 1.5
C9orf3-222ENST00000496567 EMSYQ7Z589 1322 aa24.43■■□□□ 1.5
C9orf3-222ENST00000496567 LGR5O75473 907 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 TFRCP02786 760 aaKnown RBP24.42■■□□□ 1.5
C9orf3-222ENST00000496567 LGALS2P05162 132 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 UBA7P41226 1012 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 GJA8P48165 433 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 AXDND1Q5T1B0 1012 aaPredicted RBP24.42■■□□□ 1.5
C9orf3-222ENST00000496567 UTP14CQ5TAP6 766 aaKnown RBP24.42■■□□□ 1.5
C9orf3-222ENST00000496567 ATP6V0A1Q93050 837 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 CRISPLD2Q9H0B8 497 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 SMARCAD1Q9H4L7 1026 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 ZNF302Q9NR11 478 aa24.42■■□□□ 1.5
C9orf3-222ENST00000496567 KBTBD13C9JR72 458 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms