RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 NFASCO94856 1347 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 COBLO75128 1261 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 LETM1O95202 739 aaPredicted RBP9.64□□□□□ -0.87
U2AF1-212ENST00000496462 MUTP22033 750 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 MARCKSP29966 332 aaPredicted RBP9.64□□□□□ -0.87
U2AF1-212ENST00000496462 MOGSQ13724 837 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 PDIA5Q14554 519 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 DHX8Q14562 1220 aaKnown RBP9.64□□□□□ -0.87
U2AF1-212ENST00000496462 XKR3Q5GH77 459 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 CCDC65Q8IXS2 484 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 METTL13Q8N6R0 699 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 FSIP1Q8NA03 581 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 CNNM3Q8NE01 707 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 MRPS27Q92552 414 aaKnown RBP9.64□□□□□ -0.87
U2AF1-212ENST00000496462 TSEN34Q9BSV6 310 aaKnown RBP9.64□□□□□ -0.87
U2AF1-212ENST00000496462 DNAI2Q9GZS0 605 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 MEIS2O14770 477 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 ICAM3P32942 547 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 ANKLE1Q8NAG6 615 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 MCPH1Q8NEM0 835 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 UBIAD1Q9Y5Z9 338 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 SOWAHBA6NEL2 793 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 MEIS1O00470 390 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 CTAGE5O15320 804 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 PPP6R2O75170 966 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 CTDNEP1O95476 244 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 IDEP14735 1019 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 ADCYAP1R1P41586 468 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 SYKP43405 635 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 DPF3Q92784 378 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 INPP4AQ96PE3 977 aaPredicted RBP9.63□□□□□ -0.87
U2AF1-212ENST00000496462 TUFT1Q9NNX1 390 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 GABRQQ9UN88 632 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 A0A0U1RQG5 324 aaPredicted RBP9.63□□□□□ -0.87
U2AF1-212ENST00000496462 GAS2O43903 313 aaKnown RBP9.63□□□□□ -0.87
U2AF1-212ENST00000496462 SORBS3O60504 671 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 FDPSP14324 419 aaKnown RBP9.63□□□□□ -0.87
U2AF1-212ENST00000496462 PPFIA1Q13136 1202 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 ZNF484Q5JVG2 852 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 CELF3Q5SZQ8 465 aaKnown RBP9.63□□□□□ -0.87
U2AF1-212ENST00000496462 TBC1D5Q92609 795 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 CEP170P1Q96L14 293 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 EXOC7Q9UPT5 735 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 MYH8P13535 1937 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 SPATA31C2B4DYI2 1134 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 BRD1O95696 1058 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 GJB1P08034 283 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 IGBP1P78318 339 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 SLC39A14Q15043 492 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 SWSAP1Q6NVH7 229 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 AGO4Q9HCK5 861 aaKnown RBP9.63□□□□□ -0.87
U2AF1-212ENST00000496462 GABBR1Q9UBS5 961 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 STK17AQ9UEE5 414 aa9.63□□□□□ -0.87
U2AF1-212ENST00000496462 TDP2O95551 362 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 ACTN1P12814 892 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 SASS6Q6UVJ0 657 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 NPLOC4Q8TAT6 608 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 OXER1Q8TDS5 423 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 AFG1LQ8WV93 481 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 LARSQ9P2J5 1176 aaKnown RBP9.62□□□□□ -0.87
U2AF1-212ENST00000496462 C17orf102A2RUQ5 167 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 PPP1R2P41236 205 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 CAP1Q01518 475 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 DNM1Q05193 864 aaKnown RBP9.62□□□□□ -0.87
U2AF1-212ENST00000496462 STRN3Q13033 797 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 USP37Q86T82 979 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 DEPTORQ8TB45 409 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 BICD1Q96G01 975 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 TIPINQ9BVW5 301 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 ADGRA2Q96PE1 1338 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 LAMB1P07942 1786 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 ACTR2P61160 394 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 CACNB2Q08289 660 aaPredicted RBP9.62□□□□□ -0.87
U2AF1-212ENST00000496462 IER5Q5VY09 327 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 DRC1Q96MC2 740 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 TSG101Q99816 390 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 NAT10Q9H0A0 1025 aaKnown RBP9.62□□□□□ -0.87
U2AF1-212ENST00000496462 SUGCTQ9HAC7 445 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 DDX19AQ9NUU7 478 aaKnown RBP9.62□□□□□ -0.87
U2AF1-212ENST00000496462 AKT3Q9Y243 479 aa9.62□□□□□ -0.87
U2AF1-212ENST00000496462 THSD7BQ9C0I4 1608 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 POTEB3A0JP26 581 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 FGFR1OPO95684 399 aaKnown RBP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 TCF7P36402 384 aaPredicted RBP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 RFC5P40937 340 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 POTEBQ6S5H4 581 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 SYCP3Q8IZU3 236 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 BBXQ8WY36 941 aaPredicted RBP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 PRDM5Q9NQX1 630 aaPredicted RBP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 EXOC1Q9NV70 894 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 ASAP2O43150 1006 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 PRPF40AO75400 957 aaKnown RBP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 PARNO95453 639 aaKnown RBP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 XRCC6P12956 609 aaKnown RBP eCLIP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 TRIM21P19474 475 aaKnown RBP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 GHRHRQ02643 423 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 PTPN11Q06124 597 aaPredicted RBP9.61□□□□□ -0.87
U2AF1-212ENST00000496462 PDILTQ8N807 584 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 PPTC7Q8NI37 304 aa9.61□□□□□ -0.87
U2AF1-212ENST00000496462 DDX41Q9UJV9 622 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms