RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MTMR1Q13613 665 aa16.36■□□□□ 0.21
VTI1A-209ENST00000496445 GIMAP8Q8ND71 665 aaPredicted RBP16.36■□□□□ 0.21
VTI1A-209ENST00000496445 BRF1Q92994 677 aa16.36■□□□□ 0.21
VTI1A-209ENST00000496445 CDHR1Q96JP9 859 aa16.36■□□□□ 0.21
VTI1A-209ENST00000496445 JADE2Q9NQC1 790 aa16.36■□□□□ 0.21
VTI1A-209ENST00000496445 PRDM6Q9NQX0 595 aa16.36■□□□□ 0.21
VTI1A-209ENST00000496445 SETD4Q9NVD3 440 aa16.36■□□□□ 0.21
VTI1A-209ENST00000496445 BARHL2Q9NY43 387 aa16.36■□□□□ 0.21
VTI1A-209ENST00000496445 ZNF215Q9UL58 517 aaPredicted RBP16.36■□□□□ 0.21
VTI1A-209ENST00000496445 V9GY48 417 aaPredicted RBP16.36■□□□□ 0.21
VTI1A-209ENST00000496445 GSTTP1A0A1W2PQM5 241 aa16.35■□□□□ 0.21
VTI1A-209ENST00000496445 EPOPA6NHQ4 379 aa16.35■□□□□ 0.21
VTI1A-209ENST00000496445 hCG_1984214I3L0E3 225 aa16.35■□□□□ 0.21
VTI1A-209ENST00000496445 RPS6KB1P23443 525 aa16.35■□□□□ 0.21
VTI1A-209ENST00000496445 ADD1P35611 737 aaKnown RBP16.35■□□□□ 0.21
VTI1A-209ENST00000496445 KCNJ6P48051 423 aa16.35■□□□□ 0.21
VTI1A-209ENST00000496445 CLK2P49760 499 aaKnown RBP16.35■□□□□ 0.21
VTI1A-209ENST00000496445 ADCY7P51828 1080 aa16.35■□□□□ 0.21
VTI1A-209ENST00000496445 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
VTI1A-209ENST00000496445 SPRED2Q7Z698 418 aa16.35■□□□□ 0.21
VTI1A-209ENST00000496445 ZNF713Q8N859 430 aaPredicted RBP16.35■□□□□ 0.21
VTI1A-209ENST00000496445 CYP2W1Q8TAV3 490 aa16.35■□□□□ 0.21
VTI1A-209ENST00000496445 LMBR1Q8WVP7 490 aa16.35■□□□□ 0.21
VTI1A-209ENST00000496445 ANO3Q9BYT9 981 aa16.35■□□□□ 0.21
VTI1A-209ENST00000496445 AGXT2Q9BYV1 514 aa16.35■□□□□ 0.21
VTI1A-209ENST00000496445 OSBPL7Q9BZF2 842 aa16.35■□□□□ 0.21
VTI1A-209ENST00000496445 TMEM260Q9NX78 707 aa16.35■□□□□ 0.21
VTI1A-209ENST00000496445 LCHNA4D1U4 455 aa16.34■□□□□ 0.21
VTI1A-209ENST00000496445 RSPH10B2B2RC85 870 aa16.34■□□□□ 0.21
VTI1A-209ENST00000496445 LGR5O75473 907 aa16.34■□□□□ 0.21
VTI1A-209ENST00000496445 RSPH10BP0C881 870 aa16.34■□□□□ 0.21
VTI1A-209ENST00000496445 TAP1Q03518 808 aa16.34■□□□□ 0.21
VTI1A-209ENST00000496445 BLOC1S2Q6QNY1 142 aa16.34■□□□□ 0.21
VTI1A-209ENST00000496445 TEX2Q8IWB9 1127 aa16.34■□□□□ 0.21
VTI1A-209ENST00000496445 FBXL16Q8N461 479 aa16.34■□□□□ 0.21
VTI1A-209ENST00000496445 MXRA8Q9BRK3 442 aa16.34■□□□□ 0.21
VTI1A-209ENST00000496445 EHMT1Q9H9B1 1298 aa16.34■□□□□ 0.21
VTI1A-209ENST00000496445 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
VTI1A-209ENST00000496445 EMSYQ7Z589 1322 aa16.34■□□□□ 0.21
VTI1A-209ENST00000496445 TTC28Q96AY4 2481 aa16.34■□□□□ 0.21
VTI1A-209ENST00000496445 ABHD14A-ACY1A0A1B0GW23 586 aa16.33■□□□□ 0.2
VTI1A-209ENST00000496445 SMCO2A6NFE2 343 aa16.33■□□□□ 0.2
VTI1A-209ENST00000496445 ADAMTS3O15072 1205 aa16.33■□□□□ 0.2
VTI1A-209ENST00000496445 CTSHP09668 335 aa16.33■□□□□ 0.2
VTI1A-209ENST00000496445 IGFBP4P22692 258 aa16.33■□□□□ 0.2
VTI1A-209ENST00000496445 ARHGAP4P98171 946 aa16.33■□□□□ 0.2
VTI1A-209ENST00000496445 FGD1P98174 961 aa16.33■□□□□ 0.2
VTI1A-209ENST00000496445 PFKFB3Q16875 520 aaPredicted RBP16.33■□□□□ 0.2
VTI1A-209ENST00000496445 PPM1EQ8WY54 764 aa16.33■□□□□ 0.2
VTI1A-209ENST00000496445 CERS4Q9HA82 394 aa16.33■□□□□ 0.2
VTI1A-209ENST00000496445 KCNH7Q9NS40 1196 aa16.33■□□□□ 0.2
VTI1A-209ENST00000496445 PRRC2BQ5JSZ5 2229 aaKnown RBP16.33■□□□□ 0.2
VTI1A-209ENST00000496445 RFXAPO00287 272 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 MAFGO15525 162 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 TLL1O43897 1013 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 CAND2O75155 1236 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 REC8O95072 547 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 ARP10275 920 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 GNAT1P11488 350 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 SCG2P13521 617 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 MARK3P27448 753 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 SREBF1P36956 1147 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 ITGB3BPQ13352 177 aaPredicted RBP16.32■□□□□ 0.2
VTI1A-209ENST00000496445 AP3B2Q13367 1082 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 PKN1Q16512 942 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 PLEKHG4Q58EX7 1191 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 RUFY4Q6ZNE9 571 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 DBF4BQ8NFT6 615 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 SEPT1Q8WYJ6 367 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 PCYT2Q99447 389 aa16.32■□□□□ 0.2
VTI1A-209ENST00000496445 JPH1Q9HDC5 661 aaPredicted RBP16.32■□□□□ 0.2
VTI1A-209ENST00000496445 WDR81Q562E7 1941 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 LOXHD1Q8IVV2 1947 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 NFASCO94856 1347 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 NRCAMQ92823 1304 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 KIF28PB7ZC32 967 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 EFCAB14O75071 495 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 GJB5O95377 273 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 FOSP01100 380 aaPredicted RBP16.31■□□□□ 0.2
VTI1A-209ENST00000496445 IKBKEQ14164 716 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 CCDC85BQ15834 202 aaPredicted RBP16.31■□□□□ 0.2
VTI1A-209ENST00000496445 NTRK3Q16288 839 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 CEP55Q53EZ4 464 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.31■□□□□ 0.2
VTI1A-209ENST00000496445 CRYGNQ8WXF5 182 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 PHKBQ93100 1093 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 AGO4Q9HCK5 861 aaKnown RBP16.31■□□□□ 0.2
VTI1A-209ENST00000496445 ERAP1Q9NZ08 941 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 SLC9A2Q9UBY0 812 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 NLRC5Q86WI3 1866 aa16.31■□□□□ 0.2
VTI1A-209ENST00000496445 CCDC196A0A1B0GTZ2 297 aa16.3■□□□□ 0.2
VTI1A-209ENST00000496445 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
VTI1A-209ENST00000496445 PPFIA3O75145 1194 aa16.3■□□□□ 0.2
VTI1A-209ENST00000496445 PPFIA1Q13136 1202 aa16.3■□□□□ 0.2
VTI1A-209ENST00000496445 GRIK4Q16099 956 aa16.3■□□□□ 0.2
VTI1A-209ENST00000496445 MARCH8Q5T0T0 291 aa16.3■□□□□ 0.2
VTI1A-209ENST00000496445 JAKMIP3Q5VZ66 844 aa16.3■□□□□ 0.2
VTI1A-209ENST00000496445 ARNTL2Q8WYA1 636 aa16.3■□□□□ 0.2
VTI1A-209ENST00000496445 GLT8D2Q9H1C3 349 aa16.3■□□□□ 0.2
VTI1A-209ENST00000496445 COL4A6Q14031 1691 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms