RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 MAP7D2Q96T17 732 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 NUP88Q99567 741 aaPredicted RBP7.7□□□□□ -1.18
USP39-219ENST00000496047 SLF1Q9BQI6 1058 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 TMUB1Q9BVT8 246 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 WDR11Q9BZH6 1224 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 TMEM39BQ9GZU3 492 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 HSD3B7Q9H2F3 369 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 PICK1Q9NRD5 415 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 ZNHIT6Q9NWK9 470 aaKnown RBP7.7□□□□□ -1.18
USP39-219ENST00000496047 TSKSQ9UJT2 592 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 GDAQ9Y2T3 454 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 GJA3Q9Y6H8 435 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 SCN4AP35499 1836 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 PITPNM2Q9BZ72 1349 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 RLFQ13129 1914 aa7.7□□□□□ -1.18
USP39-219ENST00000496047 ZNFX1Q9P2E3 1918 aaKnown RBP7.7□□□□□ -1.18
USP39-219ENST00000496047 A0A1W2PQC6 194 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 MEIS2O14770 477 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 KLRC4O43908 158 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 ZBED4O75132 1171 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 TBCAO75347 108 aaKnown RBP7.69□□□□□ -1.18
USP39-219ENST00000496047 GNA14O95837 355 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 CCDC175P0C221 793 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 YBX3P16989 372 aaKnown RBP eCLIP7.69□□□□□ -1.188e-10■■□□□ 11.4
USP39-219ENST00000496047 CIITAP33076 1130 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 EPS15P42566 896 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 ECE1P42892 770 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 MAP3K10Q02779 954 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 UBXN1Q04323 297 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 MCM6Q14566 821 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 RASA3Q14644 834 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 NR1I3Q14994 352 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 KRT31Q15323 416 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 ARMCX5Q6P1M9 558 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 TXLNBQ8N3L3 684 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 GUF1Q8N442 669 aaKnown RBP7.69□□□□□ -1.18
USP39-219ENST00000496047 PRPF38AQ8NAV1 312 aaKnown RBP7.69□□□□□ -1.18
USP39-219ENST00000496047 RETREG2Q8NC44 543 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 ZNF592Q92610 1267 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 CCDC43Q96MW1 224 aaKnown RBP7.69□□□□□ -1.18
USP39-219ENST00000496047 MMTAG2Q9BU76 263 aaKnown RBP7.69□□□□□ -1.18
USP39-219ENST00000496047 TEKT3Q9BXF9 490 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 TANGO6Q9C0B7 1094 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 TUFT1Q9NNX1 390 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 KCNMB3Q9NPA1 279 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 PANK4Q9NVE7 773 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 ADD3Q9UEY8 706 aaKnown RBP7.69□□□□□ -1.18
USP39-219ENST00000496047 RABGEF1Q9UJ41 708 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 CCPG1Q9ULG6 757 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 DNM3Q9UQ16 869 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 A0A0G2JMZ2 1700 aa7.69□□□□□ -1.18
USP39-219ENST00000496047 A0A1W2PRG0 241 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 LGALS16A8MUM7 142 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 NFKBIEO00221 500 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 MFAP3LO75121 409 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 ICAM1P05362 532 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 PLA2G4BP0C869 781 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 GAP43P17677 238 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 RPA1P27694 616 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 GMPSP49915 693 aaPredicted RBP7.68□□□□□ -1.18
USP39-219ENST00000496047 HTRA3P83110 453 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 TBX2Q13207 712 aaPredicted RBP7.68□□□□□ -1.18
USP39-219ENST00000496047 NBPF9Q3BBW0 867 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 FAM26FQ5R3K3 315 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 CYP26C1Q6V0L0 522 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 MIGA2Q7L4E1 593 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 DYMQ7RTS9 669 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 GPBP1Q86WP2 473 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 TMTC1Q8IUR5 882 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 MYOCDQ8IZQ8 938 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 C17orf53Q8N3J3 647 aaPredicted RBP7.68□□□□□ -1.18
USP39-219ENST00000496047 HAS1Q92839 578 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 PPP1R13BQ96KQ4 1090 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 CNOT6LQ96LI5 555 aaKnown RBP7.68□□□□□ -1.18
USP39-219ENST00000496047 PNMA5Q96PV4 448 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 PHOX2BQ99453 314 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 MTRQ99707 1265 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 BEGAINQ9BUH8 593 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 POLR3CQ9BUI4 534 aaPredicted RBP7.68□□□□□ -1.18
USP39-219ENST00000496047 NOC4LQ9BVI4 516 aaKnown RBP7.68□□□□□ -1.18
USP39-219ENST00000496047 SRRTQ9BXP5 876 aaKnown RBP7.68□□□□□ -1.18
USP39-219ENST00000496047 MAF1Q9H063 256 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 KIAA1683Q9H0B3 1180 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 VPS16Q9H269 839 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 TAB2Q9NYJ8 693 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 TMOD4Q9NZQ9 345 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 CNOT7Q9UIV1 285 aaKnown RBP7.68□□□□□ -1.18
USP39-219ENST00000496047 HACL1Q9UJ83 578 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 KIAA1024Q9UPX6 916 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 PHLPP2Q6ZVD8 1323 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 PLXNA1Q9UIW2 1896 aa7.68□□□□□ -1.18
USP39-219ENST00000496047 PAPPA2Q9BXP8 1791 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 MYMKA6NI61 221 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 POTECB2RU33 542 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 C19orf81C9J6K1 198 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 FZD9O00144 591 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 CALUO43852 315 aaPredicted RBP7.67□□□□□ -1.18
USP39-219ENST00000496047 PPP1R12BO60237 982 aaPredicted RBP7.67□□□□□ -1.18
USP39-219ENST00000496047 GAS7O60861 476 aa7.67□□□□□ -1.18
USP39-219ENST00000496047 FLOT1O75955 427 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms