RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 PTPN22Q9Y2R2 807 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 TRIM17Q9Y577 477 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 PAMP19021 973 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 CYP7A1P22680 504 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 ACTN3Q08043 901 aaPredicted RBP5.55□□□□□ -1.52
NF1-216ENST00000495910 EFR3AQ14156 821 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 LBRQ14739 615 aaKnown RBP5.55□□□□□ -1.52
NF1-216ENST00000495910 CNGA3Q16281 694 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 RSBN1Q5VWQ0 802 aaPredicted RBP5.55□□□□□ -1.52
NF1-216ENST00000495910 ANKS3Q6ZW76 656 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 CENPUQ71F23 418 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 SIX6OS1Q8N1H7 587 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 MYCT1Q8N699 235 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 TBC1D22AQ8WUA7 517 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.55□□□□□ -1.529e-7■■■■■ 29
NF1-216ENST00000495910 TMEM161AQ9NX61 479 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 WBP11Q9Y2W2 641 aaKnown RBP5.55□□□□□ -1.52
NF1-216ENST00000495910 GNAT3A8MTJ3 354 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 SMAPO00193 183 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 CUTAO60888 179 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 KRT1P04264 644 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 CCDC166P0CW27 439 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 TNNI1P19237 187 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 COX10Q12887 443 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 C2CD6Q53TS8 623 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 ESRP1Q6NXG1 681 aaKnown RBP5.55□□□□□ -1.52
NF1-216ENST00000495910 OR8K1Q8NGG5 319 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 VPS39Q96JC1 886 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 ELAC2Q9BQ52 826 aaKnown RBP5.55□□□□□ -1.52
NF1-216ENST00000495910 GLT8D2Q9H1C3 349 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 NOVA2Q9UNW9 492 aaKnown RBP5.55□□□□□ -1.52
NF1-216ENST00000495910 EXOC1LA0A1B0GW35 172 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 ZNF839A8K0R7 811 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 ABL1P00519 1130 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 NFKBIAP25963 317 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 SERPINB4P48594 390 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 PAPOLAP51003 745 aaKnown RBP5.55□□□□□ -1.52
NF1-216ENST00000495910 TMPRSS15P98073 1019 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 TNFAIP2Q03169 654 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 DRP2Q13474 957 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 ZNF568Q3ZCX4 644 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 MCMDC2Q4G0Z9 681 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 CENPPQ6IPU0 288 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 CDC37L1Q7L3B6 337 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 EPM2AIP1Q7L775 607 aaPredicted RBP5.55□□□□□ -1.52
NF1-216ENST00000495910 MICU2Q8IYU8 434 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 C19orf18Q8NEA5 215 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 LRRC2Q9BYS8 371 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 FAM129AQ9BZQ8 928 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 KDM4CQ9H3R0 1056 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 ECT2Q9H8V3 914 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 PPP2R2CQ9Y2T4 447 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 RBM8AQ9Y5S9 174 aaKnown RBP5.55□□□□□ -1.52
NF1-216ENST00000495910 CTTNBP2Q8WZ74 1663 aa5.55□□□□□ -1.52
NF1-216ENST00000495910 PTPDC1A2A3K4 754 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 CCDC162PA2VCL2 907 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 RSPH10B2B2RC85 870 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 CFAP99D6REC4 459 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 RSPH10BP0C881 870 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 TMEM154Q6P9G4 183 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 NANOGNBQ7Z5D8 188 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 C17orf53Q8N3J3 647 aaPredicted RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 SEPT1Q8WYJ6 367 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 TESK2Q96S53 571 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 PDZK1P1A8MUH7 402 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 DDHD2O94830 711 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 GCNT3O95395 438 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 KCNA3P22001 575 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 HNRNPH2P55795 449 aaKnown RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 RUNDC3AQ59EK9 446 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 ADAT2Q7Z6V5 191 aaKnown RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 NEK8Q86SG6 692 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 MAGOHBQ96A72 148 aaKnown RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 TRIM11Q96F44 468 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 MBIPQ9NS73 344 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 PGM3O95394 542 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 CYP19A1P11511 503 aaPredicted RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 GCFC2P16383 781 aaKnown RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 EPHB1P54762 984 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 KLC1Q07866 573 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 CBFBQ13951 182 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 ATP13A5Q4VNC0 1218 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 USP39Q53GS9 565 aaKnown RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 NME9Q86XW9 330 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 APPL2Q8NEU8 664 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 RGL1Q9NZL6 768 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 UVRAGQ9P2Y5 699 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 DNM3Q9UQ16 869 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 PCP4L1A6NKN8 68 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 EIF4E1BA6NMX2 242 aaKnown RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 FOSL1P15407 271 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 PTPREP23469 700 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 PMLP29590 882 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 CALML6Q8TD86 181 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 VPS50Q96JG6 964 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 MRPL44Q9H9J2 332 aaKnown RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 SNRKQ9NRH2 765 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 FAM207AQ9NSI2 230 aaPredicted RBP5.54□□□□□ -1.52
NF1-216ENST00000495910 ERAP1Q9NZ08 941 aa5.54□□□□□ -1.52
NF1-216ENST00000495910 PKD2L1Q9P0L9 805 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms