RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PSMA7O14818 248 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 FGFR1OPO95684 399 aaKnown RBP11.45□□□□□ -0.58
HDAC3-214ENST00000495485 TPM2P07951 284 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 UBASH3AP57075 661 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 ASIC1P78348 528 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 PAK1Q13153 545 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 CUL4BQ13620 913 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 CEP55Q53EZ4 464 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 POTEEQ6S8J3 1075 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 ZNF467Q7Z7K2 595 aaPredicted RBP11.45□□□□□ -0.58
HDAC3-214ENST00000495485 NOC3LQ8WTT2 800 aaKnown RBP11.45□□□□□ -0.58
HDAC3-214ENST00000495485 RAD54LQ92698 747 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 USP6NLQ92738 828 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 AGBL1Q96MI9 1066 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 TRERF1Q96PN7 1200 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 PORCNQ9H237 461 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 RWDD2AQ9UIY3 292 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 GJD2Q9UKL4 321 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 DNM3Q9UQ16 869 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 ZKSCAN5Q9Y2L8 839 aa11.45□□□□□ -0.58
HDAC3-214ENST00000495485 ZNF536O15090 1300 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 SYNRGQ9UMZ2 1314 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 PP2D1A8MPX8 630 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 OPLAHO14841 1288 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 MAFGO15525 162 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 RPA1P27694 616 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 FLT3LGP49771 235 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 UBXN2AP68543 259 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 FANCCQ00597 558 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 GRB10Q13322 594 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 KMT5BQ4FZB7 885 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 TMEM119Q4V9L6 283 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 COBLL1Q53SF7 1204 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 WDR78Q5VTH9 848 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 OLFML2BQ68BL8 750 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 RNF207Q6ZRF8 634 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 DPP9Q86TI2 863 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 FAM114A1Q8IWE2 563 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 CCDC65Q8IXS2 484 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 ETNPPLQ8TBG4 499 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 NEK9Q8TD19 979 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 DHTKD1Q96HY7 919 aaPredicted RBP11.44□□□□□ -0.58
HDAC3-214ENST00000495485 MMP19Q99542 508 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 RIT2Q99578 217 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 MXRA8Q9BRK3 442 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 MMTAG2Q9BU76 263 aaKnown RBP11.44□□□□□ -0.58
HDAC3-214ENST00000495485 POLR3CQ9BUI4 534 aaPredicted RBP11.44□□□□□ -0.58
HDAC3-214ENST00000495485 TEKT3Q9BXF9 490 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 TRIM9Q9C026 710 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 BLZF1Q9H2G9 400 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 RAVER2Q9HCJ3 691 aaKnown RBP11.44□□□□□ -0.58
HDAC3-214ENST00000495485 RNF146Q9NTX7 359 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 NFE2L3Q9Y4A8 694 aa11.44□□□□□ -0.58
HDAC3-214ENST00000495485 POTEMA6NI47 508 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 MSH4O15457 936 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 GAS7O60861 476 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 STAM2O75886 525 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 HMGCRP04035 888 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 ADORA2AP29274 412 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 GRK4P32298 578 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 PRKCZQ05513 592 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 PDE4DQ08499 809 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 NCAPHQ15003 741 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 SLC9C1Q4G0N8 1177 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 NAALADL2Q58DX5 795 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 LRCH2Q5VUJ6 765 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 PCNX4Q63HM2 1172 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 NCAPH2Q6IBW4 605 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 UNC13DQ70J99 1090 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 ANKRD35Q8N283 1001 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 SPC24Q8NBT2 197 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 GIMAP8Q8ND71 665 aaPredicted RBP11.43□□□□□ -0.58
HDAC3-214ENST00000495485 STAMQ92783 540 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 ARMC5Q96C12 935 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 PLIN2Q99541 437 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 ZNF577Q9BSK1 485 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 ARHGAP39Q9C0H5 1083 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 MCOLN1Q9GZU1 580 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 TUFT1Q9NNX1 390 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 FANCLQ9NW38 375 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 IFNKQ9P0W0 207 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 ADD3Q9UEY8 706 aaKnown RBP11.43□□□□□ -0.58
HDAC3-214ENST00000495485 LOXHD1Q8IVV2 1947 aa11.43□□□□□ -0.58
HDAC3-214ENST00000495485 ZSWIM8A7E2V4 1837 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 A0A087WWV3 80 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 FAM86B1E9PN63 330 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 MEIS1O00470 390 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 EDIL3O43854 480 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 ADCY3O60266 1144 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 KRT18P05783 430 aaKnown RBP11.42□□□□□ -0.58
HDAC3-214ENST00000495485 FAM86B2P0C5J1 330 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 BMP6P22004 513 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 CTGFP29279 349 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 PPP2R5CQ13362 524 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 MCM6Q14566 821 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 ARHGEF16Q5VV41 709 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 MFSD14CQ5VZR4 134 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 KLHL10Q6JEL2 608 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 NLRX1Q86UT6 975 aa11.42□□□□□ -0.58
HDAC3-214ENST00000495485 DNERQ8NFT8 737 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms