RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 CBX3Q13185 183 aa6.62□□□□□ -1.35
PHC3-214ENST00000494943 SPARCL1Q14515 664 aa6.62□□□□□ -1.35
PHC3-214ENST00000494943 TTC38Q5R3I4 469 aa6.62□□□□□ -1.35
PHC3-214ENST00000494943 RSPH3Q86UC2 560 aa6.62□□□□□ -1.35
PHC3-214ENST00000494943 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.62□□□□□ -1.35
PHC3-214ENST00000494943 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.62□□□□□ -1.358e-7■■■□□ 16.9
PHC3-214ENST00000494943 TUBGCP2Q9BSJ2 902 aa6.62□□□□□ -1.35
PHC3-214ENST00000494943 FAM96AQ9H5X1 160 aa6.62□□□□□ -1.35
PHC3-214ENST00000494943 SEPT11Q9NVA2 429 aaKnown RBP6.62□□□□□ -1.35
PHC3-214ENST00000494943 SENP1Q9P0U3 644 aa6.62□□□□□ -1.35
PHC3-214ENST00000494943 CHMP2BQ9UQN3 213 aa6.62□□□□□ -1.35
PHC3-214ENST00000494943 FRMD4BQ9Y2L6 1034 aa6.62□□□□□ -1.35
PHC3-214ENST00000494943 FAM237AA0A1B0GTK4 181 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 BTBD11A6QL63 1104 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 FMNL1O95466 1100 aaPredicted RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 PTPREP23469 700 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 IL15P40933 162 aaPredicted RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 XIAPP98170 497 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 ASPHQ12797 758 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 CETN1Q12798 172 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 PDE1CQ14123 709 aaPredicted RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 ZNF268Q14587 947 aaPredicted RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 DNAL1Q4LDG9 190 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 ZCWPW2Q504Y3 356 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 PCNX4Q63HM2 1172 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 OLFML2BQ68BL8 750 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 RRAGAQ7L523 313 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 METTL16Q86W50 562 aaKnown RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 RIBC1Q8N443 379 aaPredicted RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 MKL1Q969V6 931 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 PAGE5Q96GU1 130 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 HAUS7Q99871 368 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 AZI2Q9H6S1 392 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 KIF20BQ96Q89 1820 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 CLTCQ00610 1675 aaKnown RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 GYG2O15488 501 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 KDM1AO60341 852 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 HAUS5O94927 633 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 PYGBP11216 843 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 HSD17B3P37058 310 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 PEX5P50542 639 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 RPL26P61254 145 aaKnown RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 CCDC153Q494R4 210 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 TNNI3KQ59H18 835 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 B3GNT6Q6ZMB0 384 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 MFSD6Q6ZSS7 791 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 TRMT10CQ7L0Y3 403 aaKnown RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 MGARPQ8TDB4 240 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 DYDC2Q96IM9 177 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 CCDC138Q96M89 665 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 TGS1Q96RS0 853 aaKnown RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 SLC5A4Q9NY91 659 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 FPGT-TNNI3KV9GXZ4 949 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 ANKARQ7Z5J8 1434 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 BAG2O95816 211 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 GYPCP04921 128 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 RCAN1P53805 252 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 DR1Q01658 176 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 MAN2A1Q16706 1144 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 NT5DC1Q5TFE4 455 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 DTHD1Q6ZMT9 781 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 STXBP4Q6ZWJ1 553 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 UNC13DQ70J99 1090 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 G2E3Q7L622 706 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 PATL1Q86TB9 770 aaKnown RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 MCF2L2Q86YR7 1114 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 TMEM139Q8IV31 216 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.61□□□□□ -1.35
PHC3-214ENST00000494943 NGDNQ8NEJ9 315 aaKnown RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 TSPAN18Q96SJ8 248 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 MMTAG2Q9BU76 263 aaKnown RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 USP44Q9H0E7 712 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 HPSEQ9Y251 543 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 PLEKHG1Q9ULL1 1385 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 SSU72P8A0A1W2PR75 194 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 PI4KAP2A4QPH2 592 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 LAD1O00515 517 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 ATP9AO75110 1047 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 DRD4P21917 467 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 IFNAR2P48551 515 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 ALDH5A1P51649 535 aaPredicted RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 CCNG1P51959 295 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 RNF43Q68DV7 783 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 PI4KAP1Q8N8J0 262 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 SYT2Q8N9I0 419 aaPredicted RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 ICA1LQ8NDH6 482 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 CCT6BQ92526 530 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 L3MBTL3Q96JM7 780 aaPredicted RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 PRMT1Q99873 361 aaKnown RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 CNOT7Q9UIV1 285 aaKnown RBP6.61□□□□□ -1.35
PHC3-214ENST00000494943 BLOC1S6Q9UL45 172 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 SLC12A4Q9UP95 1085 aa6.61□□□□□ -1.35
PHC3-214ENST00000494943 H7C1W4 665 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 IPO5O00410 1097 aaKnown RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 KRT14P02533 472 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 ESRRAP11474 423 aaPredicted RBP6.6□□□□□ -1.35
PHC3-214ENST00000494943 IDO1P14902 403 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 CLCN2P51788 898 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 ARHGAP4P98171 946 aa6.6□□□□□ -1.35
PHC3-214ENST00000494943 FKBP4Q02790 459 aaKnown RBP eCLIP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms