RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 MFSD5Q6N075 450 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 TRIM50Q86XT4 487 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 TDHQ8IZJ6 230 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 FAM184AQ8NB25 1140 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 GLG1Q92896 1179 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 GTF2IRD1Q9UHL9 959 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 SCN10AQ9Y5Y9 1956 aa18.09■□□□□ 0.49
LIME1-209ENST00000494776 DOCK5Q9H7D0 1870 aa18.08■□□□□ 0.49
LIME1-209ENST00000494776 GSTTP1A0A1W2PQM5 241 aa18.08■□□□□ 0.48
LIME1-209ENST00000494776 MCM2P49736 904 aa18.08■□□□□ 0.48
LIME1-209ENST00000494776 ACTR2P61160 394 aa18.08■□□□□ 0.48
LIME1-209ENST00000494776 INF2Q27J81 1249 aa18.08■□□□□ 0.48
LIME1-209ENST00000494776 PIK3AP1Q6ZUJ8 805 aa18.08■□□□□ 0.48
LIME1-209ENST00000494776 OXER1Q8TDS5 423 aa18.08■□□□□ 0.48
LIME1-209ENST00000494776 NOC4LQ9BVI4 516 aaKnown RBP18.08■□□□□ 0.48
LIME1-209ENST00000494776 SMARCAD1Q9H4L7 1026 aa18.08■□□□□ 0.48
LIME1-209ENST00000494776 AZI2Q9H6S1 392 aa18.08■□□□□ 0.48
LIME1-209ENST00000494776 TBC1D22BQ9NU19 505 aa18.08■□□□□ 0.48
LIME1-209ENST00000494776 C17orf102A2RUQ5 167 aa18.07■□□□□ 0.48
LIME1-209ENST00000494776 CCL23P55773 120 aa18.07■□□□□ 0.48
LIME1-209ENST00000494776 PPIGQ13427 754 aaKnown RBP eCLIP18.07■□□□□ 0.48
LIME1-209ENST00000494776 BFSP2Q13515 415 aa18.07■□□□□ 0.48
LIME1-209ENST00000494776 SAFBQ15424 915 aaKnown RBP eCLIP18.07■□□□□ 0.48
LIME1-209ENST00000494776 LETM2Q2VYF4 491 aa18.07■□□□□ 0.48
LIME1-209ENST00000494776 CCDC155Q8N6L0 562 aa18.07■□□□□ 0.48
LIME1-209ENST00000494776 RETREG2Q8NC44 543 aa18.07■□□□□ 0.48
LIME1-209ENST00000494776 MMP1P03956 469 aa18.06■□□□□ 0.48
LIME1-209ENST00000494776 SMIM10L2AP0DMW4 78 aa18.06■□□□□ 0.48
LIME1-209ENST00000494776 SMIM10L2BP0DMW5 78 aa18.06■□□□□ 0.48
LIME1-209ENST00000494776 GNAT1P11488 350 aa18.06■□□□□ 0.48
LIME1-209ENST00000494776 MARK3P27448 753 aa18.06■□□□□ 0.48
LIME1-209ENST00000494776 KRT40Q6A162 431 aa18.06■□□□□ 0.48
LIME1-209ENST00000494776 C8orf76Q96K31 380 aa18.06■□□□□ 0.48
LIME1-209ENST00000494776 ERAP1Q9NZ08 941 aa18.06■□□□□ 0.48
LIME1-209ENST00000494776 LTBP2Q14767 1821 aa18.06■□□□□ 0.48
LIME1-209ENST00000494776 UMODL1Q5DID0 1318 aa18.05■□□□□ 0.48
LIME1-209ENST00000494776 BACH1O14867 736 aa18.05■□□□□ 0.48
LIME1-209ENST00000494776 TDP2O95551 362 aa18.05■□□□□ 0.48
LIME1-209ENST00000494776 CSF2RAP15509 400 aa18.05■□□□□ 0.48
LIME1-209ENST00000494776 GUCY1B3Q02153 619 aa18.05■□□□□ 0.48
LIME1-209ENST00000494776 NR5A1Q13285 461 aa18.05■□□□□ 0.48
LIME1-209ENST00000494776 Q4G0T1 1027 aa18.05■□□□□ 0.48
LIME1-209ENST00000494776 MIS18BP1Q6P0N0 1132 aa18.05■□□□□ 0.48
LIME1-209ENST00000494776 NEK8Q86SG6 692 aa18.05■□□□□ 0.48
LIME1-209ENST00000494776 DIS3L2Q8IYB7 885 aaKnown RBP18.05■□□□□ 0.48
LIME1-209ENST00000494776 ATP6V0A1Q93050 837 aa18.05■□□□□ 0.48
LIME1-209ENST00000494776 LENG9Q96B70 501 aa18.05■□□□□ 0.48
LIME1-209ENST00000494776 TMX3Q96JJ7 454 aa18.05■□□□□ 0.48
LIME1-209ENST00000494776 DDX25Q9UHL0 483 aaKnown RBP18.05■□□□□ 0.48
LIME1-209ENST00000494776 SAMM50Q9Y512 469 aa18.05■□□□□ 0.48
LIME1-209ENST00000494776 EMSYQ7Z589 1322 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 CYP3A7-CYP3A51PA0A087WV96 503 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 BTBD18B2RXH4 712 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 MSH4O15457 936 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 DHX15O43143 795 aaKnown RBP18.04■□□□□ 0.48
LIME1-209ENST00000494776 EDIL3O43854 480 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 CCNT1O60563 726 aaKnown RBP18.04■□□□□ 0.48
LIME1-209ENST00000494776 GAS7O60861 476 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 CCNE2O96020 404 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 CYP3A7P24462 503 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 STAT5BP51692 787 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 ZNF200P98182 395 aaPredicted RBP18.04■□□□□ 0.48
LIME1-209ENST00000494776 KRT76Q01546 638 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 PTK7Q13308 1070 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 FAM160B1Q5W0V3 765 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 MOXD1Q6UVY6 613 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 CAGE1Q8TC20 777 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 TNPO1Q92973 898 aaKnown RBP18.04■□□□□ 0.48
LIME1-209ENST00000494776 SCLYQ96I15 445 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 NAP1L4Q99733 375 aaKnown RBP18.04■□□□□ 0.48
LIME1-209ENST00000494776 RNPEPQ9H4A4 650 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 SETD4Q9NVD3 440 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 KIF3AQ9Y496 699 aa18.04■□□□□ 0.48
LIME1-209ENST00000494776 PITPNM1O00562 1244 aa18.03■□□□□ 0.48
LIME1-209ENST00000494776 MARCH6O60337 910 aa18.03■□□□□ 0.48
LIME1-209ENST00000494776 LGR5O75473 907 aa18.03■□□□□ 0.48
LIME1-209ENST00000494776 CD2BP2O95400 341 aaKnown RBP18.03■□□□□ 0.48
LIME1-209ENST00000494776 GCFC2P16383 781 aaKnown RBP18.03■□□□□ 0.48
LIME1-209ENST00000494776 GNL2Q13823 731 aaKnown RBP18.03■□□□□ 0.48
LIME1-209ENST00000494776 SHHQ15465 462 aa18.03■□□□□ 0.48
LIME1-209ENST00000494776 LRCH2Q5VUJ6 765 aa18.03■□□□□ 0.48
LIME1-209ENST00000494776 ZNF746Q6NUN9 644 aaPredicted RBP18.03■□□□□ 0.48
LIME1-209ENST00000494776 RPUSD2Q8IZ73 545 aaKnown RBP18.03■□□□□ 0.48
LIME1-209ENST00000494776 TEKT3Q9BXF9 490 aa18.03■□□□□ 0.48
LIME1-209ENST00000494776 WNT8AQ9H1J5 351 aa18.03■□□□□ 0.48
LIME1-209ENST00000494776 TRPC6Q9Y210 931 aa18.03■□□□□ 0.48
LIME1-209ENST00000494776 NRCAMQ92823 1304 aa18.02■□□□□ 0.48
LIME1-209ENST00000494776 CHMP2AO43633 222 aa18.02■□□□□ 0.48
LIME1-209ENST00000494776 ATG7O95352 703 aa18.02■□□□□ 0.48
LIME1-209ENST00000494776 PSAPP07602 524 aa18.02■□□□□ 0.48
LIME1-209ENST00000494776 ACRP10323 421 aa18.02■□□□□ 0.48
LIME1-209ENST00000494776 EPHB4P54760 987 aa18.02■□□□□ 0.48
LIME1-209ENST00000494776 PPFIA1Q13136 1202 aa18.02■□□□□ 0.48
LIME1-209ENST00000494776 C9orf50Q5SZB4 431 aa18.02■□□□□ 0.48
LIME1-209ENST00000494776 SWSAP1Q6NVH7 229 aa18.02■□□□□ 0.48
LIME1-209ENST00000494776 ABHD15Q6UXT9 468 aa18.02■□□□□ 0.48
LIME1-209ENST00000494776 PLPPR4Q7Z2D5 763 aa18.02■□□□□ 0.48
LIME1-209ENST00000494776 SMAP1Q8IYB5 467 aaPredicted RBP18.02■□□□□ 0.48
LIME1-209ENST00000494776 SLC5A5Q92911 643 aa18.02■□□□□ 0.48
LIME1-209ENST00000494776 RNPC3Q96LT9 517 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms