RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 TCEAL5Q5H9L2 206 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 RSPH3Q86UC2 560 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 RAB11FIP4Q86YS3 637 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 TMEM192Q8IY95 271 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 ZNF654Q8IZM8 581 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 CMTR1Q8N1G2 835 aaKnown RBP11.08□□□□□ -0.64
UBR4-216ENST00000494503 CCDC82Q8N4S0 544 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 FIBCD1Q8N539 461 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 APBB2Q92870 758 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 IL17RAQ96F46 866 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 INPP4AQ96PE3 977 aaPredicted RBP11.08□□□□□ -0.64
UBR4-216ENST00000494503 OSBPL7Q9BZF2 842 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 CLDND1Q9NY35 253 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 TELO2Q9Y4R8 837 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 TAF6LQ9Y6J9 622 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 MUC6Q6W4X9 2439 aa11.08□□□□□ -0.64
UBR4-216ENST00000494503 LOXHD1Q8IVV2 1947 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 hCG_1642624A0A1W2PR95 340 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 SPDYE3A6NKU9 549 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 CHMLP26374 656 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 ICAM3P32942 547 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 IRX6P78412 446 aaPredicted RBP11.07□□□□□ -0.64
UBR4-216ENST00000494503 SEMA3FQ13275 785 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 PCNX4Q63HM2 1172 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 RUFY4Q6ZNE9 571 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 GIMAP8Q8ND71 665 aaPredicted RBP11.07□□□□□ -0.64
UBR4-216ENST00000494503 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.07□□□□□ -0.64
UBR4-216ENST00000494503 TOP1MTQ969P6 601 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 FAM49AQ9H0Q0 323 aaPredicted RBP11.07□□□□□ -0.64
UBR4-216ENST00000494503 NSUN3Q9H649 340 aaKnown RBP11.07□□□□□ -0.64
UBR4-216ENST00000494503 IGFLR1Q9H665 355 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 CD320Q9NPF0 282 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 TUBE1Q9UJT0 475 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 FAM50BQ9Y247 325 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 RBM8AQ9Y5S9 174 aaKnown RBP11.07□□□□□ -0.64
UBR4-216ENST00000494503 NRCAMQ92823 1304 aa11.07□□□□□ -0.64
UBR4-216ENST00000494503 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.06□□□□□ -0.64
UBR4-216ENST00000494503 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.06□□□□□ -0.64
UBR4-216ENST00000494503 H3BNC9 293 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 M0QZ92 97 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 PRC1O43663 620 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 DDAH1O94760 285 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 PLEKHA8P1O95397 391 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 MTMR1Q13613 665 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 BTG3Q14201 252 aaPredicted RBP11.06□□□□□ -0.64
UBR4-216ENST00000494503 GRIK4Q16099 956 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 UBE2SQ16763 222 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 HEATR3Q7Z4Q2 680 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 FAM178BQ8IXR5 827 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 SP7Q8TDD2 431 aaPredicted RBP11.06□□□□□ -0.64
UBR4-216ENST00000494503 DNAJB3Q8WWF6 145 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 CDHR1Q96JP9 859 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 SPZ1Q9BXG8 430 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 PSTPIP2Q9H939 334 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 ERAP1Q9NZ08 941 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 TRPC6Q9Y210 931 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 FRMPD4Q14CM0 1322 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 ADGRA3Q8IWK6 1321 aa11.06□□□□□ -0.64
UBR4-216ENST00000494503 CHRNA1P02708 482 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 ALADP13716 330 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 HOXC8P31273 242 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 GNAQP50148 359 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 ANTXR2P58335 489 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 TMEM62Q0P6H9 643 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 PUS10Q3MIT2 529 aaKnown RBP11.05□□□□□ -0.64
UBR4-216ENST00000494503 TAF2Q6P1X5 1199 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 XRRA1Q6P2D8 792 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 RPAINQ86UA6 219 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 MB21D2Q8IYB1 491 aaPredicted RBP11.05□□□□□ -0.64
UBR4-216ENST00000494503 IGDCC4Q8TDY8 1250 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 SEPT1Q8WYJ6 367 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 LZTS2Q9BRK4 669 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 C11orf84Q9BUA3 381 aaPredicted RBP11.05□□□□□ -0.64
UBR4-216ENST00000494503 AZI2Q9H6S1 392 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 EHMT1Q9H9B1 1298 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 LY9Q9HBG7 655 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 SLC12A7Q9Y666 1083 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 CDY2AQ9Y6F7 541 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 ATG2AQ2TAZ0 1938 aa11.05□□□□□ -0.64
UBR4-216ENST00000494503 GRXCR2A6NFK2 248 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 PI4K2BG5E9Z4 385 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 MEIS2O14770 477 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 SGSM2O43147 1006 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 GPR37L1O60883 481 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 ATP9AO75110 1047 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 MCM5P33992 734 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 MKRN4PQ13434 485 aaPredicted RBP11.04□□□□□ -0.64
UBR4-216ENST00000494503 LPIN1Q14693 890 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 PAN2Q504Q3 1202 aaKnown RBP11.04□□□□□ -0.64
UBR4-216ENST00000494503 SPOUT1Q5T280 376 aaKnown RBP11.04□□□□□ -0.64
UBR4-216ENST00000494503 MICU3Q86XE3 530 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 GPRASP2Q96D09 838 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 ZBTB10Q96DT7 871 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 PABPC5Q96DU9 382 aaKnown RBP11.04□□□□□ -0.64
UBR4-216ENST00000494503 SENP7Q9BQF6 1050 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 LRRC2Q9BYS8 371 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 SMARCAD1Q9H4L7 1026 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 JPH1Q9HDC5 661 aaPredicted RBP11.04□□□□□ -0.64
UBR4-216ENST00000494503 C11orf16Q9NQ32 467 aa11.04□□□□□ -0.64
UBR4-216ENST00000494503 NAP1L2Q9ULW6 460 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms