RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 CNOT6LQ96LI5 555 aaKnown RBP18.38■□□□□ 0.53
ATG4B-225ENST00000494465 BHMT2Q9H2M3 363 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 WRAP73Q9P2S5 460 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-225ENST00000494465 GYPCP04921 128 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 EIF2AK2P19525 551 aaKnown RBP18.38■□□□□ 0.53
ATG4B-225ENST00000494465 LRRC63Q05C16 580 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 SNRNP48Q6IEG0 339 aaKnown RBP18.38■□□□□ 0.53
ATG4B-225ENST00000494465 MYOCDQ8IZQ8 938 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 CNKSR2Q8WXI2 1034 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 C16orf45Q96MC5 204 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-225ENST00000494465 REEP2Q9BRK0 252 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 TEKT3Q9BXF9 490 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 JADE2Q9NQC1 790 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 PXMP2Q9NR77 195 aa18.38■□□□□ 0.53
ATG4B-225ENST00000494465 MAGEC2Q9UBF1 373 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-225ENST00000494465 AKR1B15C9JRZ8 316 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-225ENST00000494465 HERC4Q5GLZ8 1057 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-225ENST00000494465 L3MBTL3Q96JM7 780 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-225ENST00000494465 PDCD2LQ9BRP1 358 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 TUBGCP2Q9BSJ2 902 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 RUSC1Q9BVN2 902 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 AGO4Q9HCK5 861 aaKnown RBP18.37■□□□□ 0.53
ATG4B-225ENST00000494465 TRMT1Q9NXH9 659 aaKnown RBP18.37■□□□□ 0.53
ATG4B-225ENST00000494465 TBC1D7Q9P0N9 293 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 SPDYE16A6NNV3 312 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-225ENST00000494465 NRDCO43847 1150 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 UBXN1Q04323 297 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 ITGB3BPQ13352 177 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-225ENST00000494465 BAATQ14032 418 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-225ENST00000494465 EPHA7Q15375 998 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 NSMFQ6X4W1 530 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 LRRC55Q6ZSA7 311 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 NYAP1Q6ZVC0 841 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 TPH2Q8IWU9 490 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 MB21D1Q8N884 522 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 RBM46Q8TBY0 533 aaKnown RBP18.37■□□□□ 0.53
ATG4B-225ENST00000494465 PIGOQ8TEQ8 1089 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 RMDN3Q96TC7 470 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 BAG1Q99933 345 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-225ENST00000494465 LCTP09848 1927 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 LOXHD1Q8IVV2 1947 aa18.37■□□□□ 0.53
ATG4B-225ENST00000494465 ZBTB39O15060 712 aa18.36■□□□□ 0.53
ATG4B-225ENST00000494465 KRT18P05783 430 aaKnown RBP18.36■□□□□ 0.53
ATG4B-225ENST00000494465 MUTP22033 750 aa18.36■□□□□ 0.53
ATG4B-225ENST00000494465 FXR1P51114 621 aaKnown RBP eCLIP18.36■□□□□ 0.53
ATG4B-225ENST00000494465 FAM114A1Q8IWE2 563 aa18.36■□□□□ 0.53
ATG4B-225ENST00000494465 SCFD1Q8WVM8 642 aa18.36■□□□□ 0.53
ATG4B-225ENST00000494465 PANX2Q96RD6 677 aa18.36■□□□□ 0.53
ATG4B-225ENST00000494465 MYPNQ86TC9 1320 aa18.36■□□□□ 0.53
ATG4B-225ENST00000494465 A0A0G2JMZ2 1700 aa18.36■□□□□ 0.53
ATG4B-225ENST00000494465 STX10O60499 249 aa18.35■□□□□ 0.53
ATG4B-225ENST00000494465 MFAP3LO75121 409 aa18.35■□□□□ 0.53
ATG4B-225ENST00000494465 MIIPQ5JXC2 388 aa18.35■□□□□ 0.53
ATG4B-225ENST00000494465 PPFIBP1Q86W92 1011 aa18.35■□□□□ 0.53
ATG4B-225ENST00000494465 A0A1W2PQC6 194 aa18.35■□□□□ 0.53
ATG4B-225ENST00000494465 RNF225M0QZC1 329 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-225ENST00000494465 ARHGAP6O43182 974 aa18.35■□□□□ 0.53
ATG4B-225ENST00000494465 PPP1R12BO60237 982 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-225ENST00000494465 CASP14P31944 242 aa18.35■□□□□ 0.53
ATG4B-225ENST00000494465 TREML2Q5T2D2 321 aa18.35■□□□□ 0.53
ATG4B-225ENST00000494465 RINT1Q6NUQ1 792 aa18.35■□□□□ 0.53
ATG4B-225ENST00000494465 HOXC10Q9NYD6 342 aa18.35■□□□□ 0.53
ATG4B-225ENST00000494465 PKD2L1Q9P0L9 805 aa18.35■□□□□ 0.53
ATG4B-225ENST00000494465 KIAA1217Q5T5P2 1943 aa18.35■□□□□ 0.53
ATG4B-225ENST00000494465 RSPH10B2B2RC85 870 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 B4DLN1 442 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 RSPH10BP0C881 870 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 TERF1P54274 439 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 MTMR1Q13613 665 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 CPLX3Q8WVH0 158 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 PPP1R13BQ96KQ4 1090 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 TEX13BQ9BXU2 312 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 KCTD10Q9H3F6 313 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.34■□□□□ 0.531e-6■■□□□ 12.3
ATG4B-225ENST00000494465 DDX39AO00148 427 aaKnown RBP18.34■□□□□ 0.53
ATG4B-225ENST00000494465 CASP5P51878 434 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 C1orf186Q6ZWK4 172 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 USP50Q70EL3 339 aaPredicted RBP18.34■□□□□ 0.53
ATG4B-225ENST00000494465 SFR1Q86XK3 245 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 BCAS3Q9H6U6 928 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 CSADQ9Y600 493 aa18.34■□□□□ 0.53
ATG4B-225ENST00000494465 MYCLP12524 364 aaPredicted RBP18.33■□□□□ 0.53
ATG4B-225ENST00000494465 TNNT1P13805 278 aa18.33■□□□□ 0.53
ATG4B-225ENST00000494465 FECHP22830 423 aa18.33■□□□□ 0.53
ATG4B-225ENST00000494465 DNM2P50570 870 aa18.33■□□□□ 0.53
ATG4B-225ENST00000494465 ARHGEF16Q5VV41 709 aa18.33■□□□□ 0.53
ATG4B-225ENST00000494465 DPY19L2Q6NUT2 758 aa18.33■□□□□ 0.53
ATG4B-225ENST00000494465 EPM2AIP1Q7L775 607 aaPredicted RBP18.33■□□□□ 0.53
ATG4B-225ENST00000494465 LXNQ9BS40 222 aa18.33■□□□□ 0.53
ATG4B-225ENST00000494465 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.33■□□□□ 0.53
ATG4B-225ENST00000494465 MTIF2P46199 727 aaKnown RBP18.33■□□□□ 0.52
ATG4B-225ENST00000494465 VSIG10LQ86VR7 867 aa18.33■□□□□ 0.52
ATG4B-225ENST00000494465 CDCA5Q96FF9 252 aa18.33■□□□□ 0.52
ATG4B-225ENST00000494465 NACC1Q96RE7 527 aa18.33■□□□□ 0.52
ATG4B-225ENST00000494465 ZHX3Q9H4I2 956 aa18.33■□□□□ 0.52
ATG4B-225ENST00000494465 WDR81Q562E7 1941 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 ATP9AO75110 1047 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 EPHX2P34913 555 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 TRIM14Q14142 442 aa18.32■□□□□ 0.52
ATG4B-225ENST00000494465 CNGA4Q8IV77 575 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 405 ms