RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 CDC45O75419 566 aa8□□□□□ -1.13
SSB-212ENST00000494051 EPHA5P54756 1037 aa8□□□□□ -1.13
SSB-212ENST00000494051 PABPC4Q13310 644 aaKnown RBP eCLIP8□□□□□ -1.13
SSB-212ENST00000494051 BTBD8Q5XKL5 378 aa8□□□□□ -1.13
SSB-212ENST00000494051 TMC5Q6UXY8 1006 aa8□□□□□ -1.13
SSB-212ENST00000494051 C16orf86Q6ZW13 317 aa8□□□□□ -1.13
SSB-212ENST00000494051 SYNPOQ8N3V7 929 aa8□□□□□ -1.13
SSB-212ENST00000494051 TTLL6Q8N841 843 aa8□□□□□ -1.13
SSB-212ENST00000494051 IGSF22Q8N9C0 903 aa8□□□□□ -1.13
SSB-212ENST00000494051 CELF4Q9BZC1 486 aaKnown RBP8□□□□□ -1.13
SSB-212ENST00000494051 RIC8BQ9NVN3 520 aa8□□□□□ -1.13
SSB-212ENST00000494051 RBPJLQ9UBG7 517 aa8□□□□□ -1.13
SSB-212ENST00000494051 TNPO3Q9Y5L0 923 aaKnown RBP8□□□□□ -1.13
SSB-212ENST00000494051 ATP23Q9Y6H3 246 aa8□□□□□ -1.13
SSB-212ENST00000494051 ZNF561-AS1K7EIQ3 104 aa7.99□□□□□ -1.13
SSB-212ENST00000494051 OPA1O60313 960 aa7.99□□□□□ -1.13
SSB-212ENST00000494051 DNAJC8O75937 253 aaPredicted RBP7.99□□□□□ -1.13
SSB-212ENST00000494051 FAHP16930 419 aa7.99□□□□□ -1.13
SSB-212ENST00000494051 KCNA6P17658 529 aa7.99□□□□□ -1.13
SSB-212ENST00000494051 BMP7P18075 431 aa7.99□□□□□ -1.13
SSB-212ENST00000494051 LACTBP83111 547 aaPredicted RBP7.99□□□□□ -1.13
SSB-212ENST00000494051 TKFCQ3LXA3 575 aa7.99□□□□□ -1.13
SSB-212ENST00000494051 TTLL7Q6ZT98 887 aa7.99□□□□□ -1.13
SSB-212ENST00000494051 ZSWIM3Q96MP5 696 aa7.99□□□□□ -1.13
SSB-212ENST00000494051 SMURF1Q9HCE7 757 aa7.99□□□□□ -1.13
SSB-212ENST00000494051 SPATA6Q9NWH7 488 aaPredicted RBP7.99□□□□□ -1.13
SSB-212ENST00000494051 PTPN1P18031 435 aaKnown RBP7.98□□□□□ -1.13
SSB-212ENST00000494051 SDSP20132 328 aa7.98□□□□□ -1.13
SSB-212ENST00000494051 IGFALSP35858 605 aa7.98□□□□□ -1.13
SSB-212ENST00000494051 CAP1Q01518 475 aa7.98□□□□□ -1.13
SSB-212ENST00000494051 DLX2Q07687 328 aaPredicted RBP7.98□□□□□ -1.13
SSB-212ENST00000494051 ZNF460Q14592 562 aa7.98□□□□□ -1.13
SSB-212ENST00000494051 FIGNQ5HY92 759 aa7.98□□□□□ -1.13
SSB-212ENST00000494051 VASNQ6EMK4 673 aa7.98□□□□□ -1.13
SSB-212ENST00000494051 SPOCD1Q6ZMY3 1216 aa7.98□□□□□ -1.13
SSB-212ENST00000494051 DDX53Q86TM3 631 aaKnown RBP7.98□□□□□ -1.13
SSB-212ENST00000494051 TP53I13Q8NBR0 393 aaPredicted RBP7.98□□□□□ -1.13
SSB-212ENST00000494051 WASF3Q9UPY6 502 aa7.98□□□□□ -1.13
SSB-212ENST00000494051 FAM90A27PA6NNH2 459 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 B4E1Z4 1266 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 ACOT7O00154 380 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 TRIM13O60858 407 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 RFPL3O75679 317 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 ASLP04424 464 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 THBS2P35442 1172 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 ADAM9Q13443 819 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 TMEM177Q53S58 311 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 ZCCHC8Q6NZY4 707 aaKnown RBP7.97□□□□□ -1.13
SSB-212ENST00000494051 LIPIQ6XZB0 460 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 OVCH1Q7RTY7 1134 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 CLIC6Q96NY7 704 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 TMEM209Q96SK2 561 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 PDGFDQ9GZP0 370 aaPredicted RBP7.97□□□□□ -1.13
SSB-212ENST00000494051 HSPBP1Q9NZL4 362 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 NTMQ9P121 344 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 SAMD15Q9P1V8 674 aa7.97□□□□□ -1.13
SSB-212ENST00000494051 SH3D21A4FU49 640 aa7.96□□□□□ -1.14
SSB-212ENST00000494051 NPTXRO95502 500 aa7.96□□□□□ -1.14
SSB-212ENST00000494051 SARSP49591 514 aaKnown RBP7.96□□□□□ -1.14
SSB-212ENST00000494051 GIMAP6Q6P9H5 292 aa7.96□□□□□ -1.14
SSB-212ENST00000494051 C2orf69Q8N8R5 385 aa7.96□□□□□ -1.14
SSB-212ENST00000494051 MARCH10Q8NA82 808 aaPredicted RBP7.96□□□□□ -1.14
SSB-212ENST00000494051 ZCCHC4Q9H5U6 513 aa7.96□□□□□ -1.14
SSB-212ENST00000494051 CROTQ9UKG9 612 aa7.96□□□□□ -1.14
SSB-212ENST00000494051 TBX22Q9Y458 520 aa7.96□□□□□ -1.14
SSB-212ENST00000494051 M0R2C6 588 aa7.95□□□□□ -1.14
SSB-212ENST00000494051 SCDO00767 359 aa7.95□□□□□ -1.14
SSB-212ENST00000494051 IGSF3O75054 1194 aa7.95□□□□□ -1.14
SSB-212ENST00000494051 GJA4P35212 333 aa7.95□□□□□ -1.14
SSB-212ENST00000494051 SLURP1P55000 103 aa7.95□□□□□ -1.14
SSB-212ENST00000494051 PHF19Q5T6S3 580 aa7.95□□□□□ -1.14
SSB-212ENST00000494051 CD276Q5ZPR3 534 aa7.95□□□□□ -1.14
SSB-212ENST00000494051 CPZQ66K79 652 aa7.95□□□□□ -1.14
SSB-212ENST00000494051 HHIPL2Q6UWX4 724 aa7.95□□□□□ -1.14
SSB-212ENST00000494051 PROSER1Q86XN7 944 aa7.95□□□□□ -1.14
SSB-212ENST00000494051 CARFQ8N187 725 aa7.95□□□□□ -1.14
SSB-212ENST00000494051 SPATA25Q9BR10 227 aa7.95□□□□□ -1.14
SSB-212ENST00000494051 MAGEC2Q9UBF1 373 aaPredicted RBP7.95□□□□□ -1.14
SSB-212ENST00000494051 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.94□□□□□ -1.14
SSB-212ENST00000494051 TLDC2A0PJX2 215 aa7.94□□□□□ -1.14
SSB-212ENST00000494051 PRAMEF25A6NGN4 478 aa7.94□□□□□ -1.14
SSB-212ENST00000494051 CLASP2O75122 1294 aaKnown RBP7.94□□□□□ -1.14
SSB-212ENST00000494051 GLRX3O76003 335 aaKnown RBP7.94□□□□□ -1.14
SSB-212ENST00000494051 ENO2P09104 434 aaPredicted RBP7.94□□□□□ -1.14
SSB-212ENST00000494051 JMJD7P0C870 316 aa7.94□□□□□ -1.14
SSB-212ENST00000494051 FLT3P36888 993 aa7.94□□□□□ -1.14
SSB-212ENST00000494051 PFKPQ01813 784 aa7.94□□□□□ -1.14
SSB-212ENST00000494051 PRAMEF18Q5VWM3 479 aa7.94□□□□□ -1.14
SSB-212ENST00000494051 UBE2R2Q712K3 238 aaPredicted RBP7.94□□□□□ -1.14
SSB-212ENST00000494051 SYT8Q8NBV8 401 aa7.94□□□□□ -1.14
SSB-212ENST00000494051 FEZ1Q99689 392 aa7.94□□□□□ -1.14
SSB-212ENST00000494051 TMA7Q9Y2S6 64 aaKnown RBP7.94□□□□□ -1.14
SSB-212ENST00000494051 SLC12A8A0AV02 714 aa7.93□□□□□ -1.14
SSB-212ENST00000494051 DDX3XO00571 662 aaKnown RBP eCLIP7.93□□□□□ -1.14
SSB-212ENST00000494051 SASH1O94885 1247 aa7.93□□□□□ -1.14
SSB-212ENST00000494051 RPL13P26373 211 aaKnown RBP7.93□□□□□ -1.14
SSB-212ENST00000494051 KCNC1P48547 511 aa7.93□□□□□ -1.14
SSB-212ENST00000494051 DBPQ10586 325 aaPredicted RBP7.93□□□□□ -1.14
SSB-212ENST00000494051 RTP5Q14D33 572 aa7.93□□□□□ -1.14
SSB-212ENST00000494051 SKIDA1Q1XH10 827 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms