RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 CT47B1P0C2W7 299 aaPredicted RBP8.1□□□□□ -1.11
SMC2-205ENST00000493955 GOLGA6DP0CG33 693 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 KRT85P78386 507 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 MLC1Q15049 377 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 RSPO4Q2I0M5 234 aaPredicted RBP8.1□□□□□ -1.11
SMC2-205ENST00000493955 MAGEB6Q8N7X4 407 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 ZNF610Q8N9Z0 462 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 ADAMTS10Q9H324 1103 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 TCF7L1Q9HCS4 588 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 ACSS2Q9NR19 701 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 GOLGA6AQ9NYA3 693 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 FBLN5Q9UBX5 448 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 TMEM59LQ9UK28 342 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 ZNF652Q9Y2D9 606 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 NUB1Q9Y5A7 615 aa8.1□□□□□ -1.11
SMC2-205ENST00000493955 SCDO00767 359 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 MAFKO60675 156 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 CAND2O75155 1236 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 TGFB1P01137 390 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 RBP3P10745 1247 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 CD96P40200 585 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 RECQLP46063 649 aaPredicted RBP8.09□□□□□ -1.11
SMC2-205ENST00000493955 CHRNA2Q15822 529 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 RALGPS1Q5JS13 557 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 CPZQ66K79 652 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 GALNT18Q6P9A2 607 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 PNMA8AQ86V59 439 aaPredicted RBP8.09□□□□□ -1.11
SMC2-205ENST00000493955 FAXDC2Q96IV6 333 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 CD244Q9BZW8 370 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 PDLIM7Q9NR12 457 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 TOPORSQ9NS56 1045 aaPredicted RBP8.09□□□□□ -1.11
SMC2-205ENST00000493955 BSDC1Q9NW68 430 aaPredicted RBP8.09□□□□□ -1.11
SMC2-205ENST00000493955 NOC2LQ9Y3T9 749 aaKnown RBP8.09□□□□□ -1.11
SMC2-205ENST00000493955 ATP23Q9Y6H3 246 aa8.09□□□□□ -1.11
SMC2-205ENST00000493955 DYRK3O43781 588 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 CYP17A1P05093 508 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 CHRNEQ04844 493 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 ZP2Q05996 745 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 LRRC32Q14392 662 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 HLTFQ14527 1009 aaKnown RBP eCLIP8.08□□□□□ -1.129e-7■■□□□ 14.2
SMC2-205ENST00000493955 PCBP2Q15366 365 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMC2-205ENST00000493955 SLC14A2Q15849 920 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 EMC4Q5J8M3 183 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 TMEM240Q5SV17 173 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 STEAP3Q658P3 488 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 CXorf57Q6NSI4 855 aaKnown RBP8.08□□□□□ -1.12
SMC2-205ENST00000493955 CYP4F22Q6NT55 531 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 CC2D1AQ6P1N0 951 aaPredicted RBP8.08□□□□□ -1.12
SMC2-205ENST00000493955 PGM2L1Q6PCE3 622 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 KCTD1Q719H9 257 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 ZZZ3Q8IYH5 903 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 DLG3Q92796 817 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 ZMAT4Q9H898 229 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 KCNH7Q9NS40 1196 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 MKS1Q9NXB0 559 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 MRFAP1Q9Y605 127 aa8.08□□□□□ -1.12
SMC2-205ENST00000493955 TRIM75PA6NK02 468 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 PRPF3O43395 683 aaKnown RBP8.07□□□□□ -1.12
SMC2-205ENST00000493955 PEX14O75381 377 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 U2AF1L5P0DN76 240 aaPredicted RBP8.07□□□□□ -1.12
SMC2-205ENST00000493955 TACR1P25103 407 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 PTX3P26022 381 aaPredicted RBP8.07□□□□□ -1.12
SMC2-205ENST00000493955 SCAND1P57086 179 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 U2AF1Q01081 240 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMC2-205ENST00000493955 MVKQ03426 396 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 BNIP3Q12983 259 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 CABP7Q86V35 215 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 AMOTL1Q8IY63 956 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 CPA6Q8N4T0 437 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 NUP43Q8NFH3 380 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 BCL7CQ8WUZ0 217 aaPredicted RBP8.07□□□□□ -1.12
SMC2-205ENST00000493955 ZDHHC5Q9C0B5 715 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 MS4A5Q9H3V2 200 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 SP110Q9HB58 689 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 ACSL6Q9UKU0 697 aa8.07□□□□□ -1.12
SMC2-205ENST00000493955 NRDCO43847 1150 aa8.06□□□□□ -1.12
SMC2-205ENST00000493955 KDM1AO60341 852 aa8.06□□□□□ -1.12
SMC2-205ENST00000493955 NTRK1P04629 796 aa8.06□□□□□ -1.12
SMC2-205ENST00000493955 KRT18P05783 430 aaKnown RBP8.06□□□□□ -1.12
SMC2-205ENST00000493955 MSL3P1P0C860 447 aa8.06□□□□□ -1.12
SMC2-205ENST00000493955 CD40P25942 277 aa8.06□□□□□ -1.12
SMC2-205ENST00000493955 GJA4P35212 333 aa8.06□□□□□ -1.12
SMC2-205ENST00000493955 SLC6A11P48066 632 aa8.06□□□□□ -1.12
SMC2-205ENST00000493955 GFOD2Q3B7J2 385 aa8.06□□□□□ -1.12
SMC2-205ENST00000493955 ESRP1Q6NXG1 681 aaKnown RBP8.06□□□□□ -1.12
SMC2-205ENST00000493955 CMIPQ8IY22 773 aa8.06□□□□□ -1.12
SMC2-205ENST00000493955 LMBR1Q8WVP7 490 aa8.06□□□□□ -1.12
SMC2-205ENST00000493955 PNMA8BQ9ULN7 279 aaPredicted RBP8.06□□□□□ -1.12
SMC2-205ENST00000493955 SLC5A6Q9Y289 635 aa8.06□□□□□ -1.12
SMC2-205ENST00000493955 ANKRD6Q9Y2G4 727 aa8.06□□□□□ -1.12
SMC2-205ENST00000493955 GIT1Q9Y2X7 761 aa8.06□□□□□ -1.12
SMC2-205ENST00000493955 GOLGA8AA7E2F4 631 aa8.05□□□□□ -1.12
SMC2-205ENST00000493955 GOLGA8BA8MQT2 603 aa8.05□□□□□ -1.12
SMC2-205ENST00000493955 HGSO14964 777 aaPredicted RBP8.05□□□□□ -1.12
SMC2-205ENST00000493955 PF4V1P10720 104 aa8.05□□□□□ -1.12
SMC2-205ENST00000493955 CD8BP10966 210 aa8.05□□□□□ -1.12
SMC2-205ENST00000493955 PRKCAP17252 672 aa8.05□□□□□ -1.12
SMC2-205ENST00000493955 EPHA5P54756 1037 aa8.05□□□□□ -1.12
SMC2-205ENST00000493955 TCIRG1Q13488 830 aa8.05□□□□□ -1.12
SMC2-205ENST00000493955 TMEM132BQ14DG7 1078 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms