RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 RETREG2Q8NC44 543 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 RASGRP4Q8TDF6 673 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 TIFAQ96CG3 184 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 ZBTB10Q96DT7 871 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 KATNAL1Q9BW62 490 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 ANO3Q9BYT9 981 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 NKX2-4Q9H2Z4 354 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 KCNH7Q9NS40 1196 aa14.44□□□□□ -0.1
HSPG2-212ENST00000493940 ZBBXA8MT70 800 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 FAM86B1E9PN63 330 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 NOP56O00567 594 aaKnown RBP14.43□□□□□ -0.1
HSPG2-212ENST00000493940 EPB41L2O43491 1005 aaKnown RBP14.43□□□□□ -0.1
HSPG2-212ENST00000493940 FAM86B2P0C5J1 330 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 FOSL2P15408 326 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 SELPP16109 830 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 PSMA5P28066 241 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 MTMR1Q13613 665 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 ERICH6BQ5W0A0 696 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 PPP1R18Q6NYC8 613 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 CAGE1Q8TC20 777 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 AFAP1L1Q8TED9 768 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 SYMPKQ92797 1274 aaKnown RBP14.43□□□□□ -0.1
HSPG2-212ENST00000493940 AIFM3Q96NN9 605 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 TM6SF1Q9BZW5 370 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 ZMYND12Q9H0C1 365 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 SLC4A7Q9Y6M7 1214 aa14.43□□□□□ -0.1
HSPG2-212ENST00000493940 IGLV3-22A0A075B6J6 115 aa14.42□□□□□ -0.1
HSPG2-212ENST00000493940 MEIS1O00470 390 aa14.42□□□□□ -0.1
HSPG2-212ENST00000493940 CXCL10P02778 98 aa14.42□□□□□ -0.1
HSPG2-212ENST00000493940 IFNAR1P17181 557 aa14.42□□□□□ -0.1
HSPG2-212ENST00000493940 SREBF1P36956 1147 aa14.42□□□□□ -0.1
HSPG2-212ENST00000493940 STK3Q13188 491 aa14.42□□□□□ -0.1
HSPG2-212ENST00000493940 ADGRE1Q14246 886 aa14.42□□□□□ -0.1
HSPG2-212ENST00000493940 MARCH8Q5T0T0 291 aa14.42□□□□□ -0.1
HSPG2-212ENST00000493940 ATP6V0A1Q93050 837 aa14.42□□□□□ -0.1
HSPG2-212ENST00000493940 SLC26A6Q9BXS9 759 aa14.42□□□□□ -0.1
HSPG2-212ENST00000493940 FTOQ9C0B1 505 aaKnown RBP eCLIP14.42□□□□□ -0.1
HSPG2-212ENST00000493940 AGO4Q9HCK5 861 aaKnown RBP14.42□□□□□ -0.1
HSPG2-212ENST00000493940 PRDM6Q9NQX0 595 aa14.42□□□□□ -0.1
HSPG2-212ENST00000493940 VPS54Q9P1Q0 977 aa14.42□□□□□ -0.1
HSPG2-212ENST00000493940 CYP46A1Q9Y6A2 500 aa14.42□□□□□ -0.1
HSPG2-212ENST00000493940 C17orf102A2RUQ5 167 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 hCG_1984214I3L0E3 225 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 DHX15O43143 795 aaKnown RBP14.41□□□□□ -0.1
HSPG2-212ENST00000493940 CCNE2O96020 404 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 FOSP01100 380 aaPredicted RBP14.41□□□□□ -0.1
HSPG2-212ENST00000493940 PFKMP08237 780 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 MARK3P27448 753 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 RFC2P35250 354 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 DEFB103AP81534 67 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 ARHGAP4P98171 946 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 NPY5RQ15761 445 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 CEP55Q53EZ4 464 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 RUFY4Q6ZNE9 571 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 ZNF713Q8N859 430 aaPredicted RBP14.41□□□□□ -0.1
HSPG2-212ENST00000493940 USP38Q8NB14 1042 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 LMBR1Q8WVP7 490 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 SEPT1Q8WYJ6 367 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 PRDM12Q9H4Q4 367 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 NLRC5Q86WI3 1866 aa14.41□□□□□ -0.1
HSPG2-212ENST00000493940 CCDC196A0A1B0GTZ2 297 aa14.4□□□□□ -0.1
HSPG2-212ENST00000493940 ESYT2A0FGR8 921 aa14.4□□□□□ -0.1
HSPG2-212ENST00000493940 RFXAPO00287 272 aa14.4□□□□□ -0.1
HSPG2-212ENST00000493940 LGR5O75473 907 aa14.4□□□□□ -0.1
HSPG2-212ENST00000493940 CYP3A4P08684 503 aa14.4□□□□□ -0.1
HSPG2-212ENST00000493940 ATP2A2P16615 1042 aaKnown RBP14.4□□□□□ -0.1
HSPG2-212ENST00000493940 THPOP40225 353 aa14.4□□□□□ -0.1
HSPG2-212ENST00000493940 WDR5P61964 334 aaKnown RBP14.4□□□□□ -0.1
HSPG2-212ENST00000493940 MKRN4PQ13434 485 aaPredicted RBP14.4□□□□□ -0.1
HSPG2-212ENST00000493940 ZNF274Q96GC6 653 aaPredicted RBP14.4□□□□□ -0.1
HSPG2-212ENST00000493940 RNF26Q9BY78 433 aaPredicted RBP14.4□□□□□ -0.1
HSPG2-212ENST00000493940 PDRG1Q9NUG6 133 aa14.4□□□□□ -0.1
HSPG2-212ENST00000493940 ATG2AQ2TAZ0 1938 aa14.4□□□□□ -0.1
HSPG2-212ENST00000493940 COL4A4P53420 1690 aaPredicted RBP14.39□□□□□ -0.11
HSPG2-212ENST00000493940 XIRP2A4UGR9 3374 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 MUC3AQ02505 3323 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 LCHNA4D1U4 455 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 EPOPA6NHQ4 379 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 MAFGO15525 162 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 ATG7O95352 703 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 LARGE1O95461 756 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 CTSHP09668 335 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 ACTR2P61160 394 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 SCRN1Q12765 414 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 AP3B2Q13367 1082 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.39□□□□□ -0.11
HSPG2-212ENST00000493940 GIMAP8Q8ND71 665 aaPredicted RBP14.39□□□□□ -0.11
HSPG2-212ENST00000493940 TRAPPC12Q8WVT3 735 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 CDHR1Q96JP9 859 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 GJB4Q9NTQ9 266 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 SLC9A2Q9UBY0 812 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 TPCN1Q9ULQ1 816 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 MYO7AQ13402 2215 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 NFASCO94856 1347 aa14.39□□□□□ -0.11
HSPG2-212ENST00000493940 TTC3P53804 2025 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 RSPH10B2B2RC85 870 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 M0R2N6 131 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 DDX39AO00148 427 aaKnown RBP14.38□□□□□ -0.11
HSPG2-212ENST00000493940 CTDNEP1O95476 244 aa14.38□□□□□ -0.11
HSPG2-212ENST00000493940 CHRNA1P02708 482 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms