RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 TIMM13Q9Y5L4 95 aaPredicted RBP5.59□□□□□ -1.51
GTF3A-208ENST00000493903 H7BY64 318 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 GSC2O15499 205 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 FGF10O15520 208 aaPredicted RBP5.58□□□□□ -1.52
GTF3A-208ENST00000493903 GSTM1P09488 218 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 PDE6AP16499 860 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 PCBP3P57721 371 aaKnown RBP5.58□□□□□ -1.52
GTF3A-208ENST00000493903 RPL11P62913 178 aaKnown RBP5.58□□□□□ -1.52
GTF3A-208ENST00000493903 IRF9Q00978 393 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 TNK2Q07912 1038 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 ADCY1Q08828 1119 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 INF2Q27J81 1249 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 RTP2Q5QGT7 225 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 ERAP2Q6P179 960 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 CYP2R1Q6VVX0 501 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 SHISA5Q8N114 240 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 MFSD4AQ8N468 514 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 KIAA1958Q8N8K9 716 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 TNIP3Q96KP6 325 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 PTCHD1Q96NR3 888 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 FAM193BQ96PV7 902 aaPredicted RBP5.58□□□□□ -1.52
GTF3A-208ENST00000493903 TAAR9Q96RI9 348 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 DBNDD2Q9BQY9 259 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 PCIF1Q9H4Z3 704 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 LGR6Q9HBX8 967 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 PTPRHQ9HD43 1115 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 NLRC4Q9NPP4 1024 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 CASS4Q9NQ75 786 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 ACSS2Q9NR19 701 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 CCM2LQ9NUG4 571 aaPredicted RBP5.58□□□□□ -1.52
GTF3A-208ENST00000493903 TERF2IPQ9NYB0 399 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 ANAPC4Q9UJX5 808 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 PHTF1Q9UMS5 762 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 CAPN6Q9Y6Q1 641 aa5.58□□□□□ -1.52
GTF3A-208ENST00000493903 KLRG2A4D1S0 409 aaPredicted RBP5.57□□□□□ -1.52
GTF3A-208ENST00000493903 TBX3O15119 743 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 PMM2O15305 246 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 AP1G1O43747 822 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 H2AFYO75367 372 aaKnown RBP5.57□□□□□ -1.52
GTF3A-208ENST00000493903 TBC1D8O95759 1140 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 ZBED1O96006 694 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 CYP17A1P05093 508 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 RHCEP18577 417 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 CD40P25942 277 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 PDE6BP35913 854 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 USP14P54578 494 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 AK2P54819 239 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 ADKP55263 362 aaKnown RBP5.57□□□□□ -1.52
GTF3A-208ENST00000493903 RHDQ02161 417 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 SPIRE1Q08AE8 756 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 ACAP2Q15057 778 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 CLUL1Q15846 466 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 ATAT1Q5SQI0 421 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 SPTY2D1Q68D10 685 aaPredicted RBP5.57□□□□□ -1.52
GTF3A-208ENST00000493903 PAOXQ6QHF9 649 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 TTLL7Q6ZT98 887 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 ZDHHC13Q8IUH4 622 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 IFNL2Q8IZJ0 200 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 FBXL6Q8N531 539 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 MYRIPQ8NFW9 859 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 ELF4Q99607 663 aaPredicted RBP5.57□□□□□ -1.52
GTF3A-208ENST00000493903 DUSP15Q9H1R2 295 aaPredicted RBP5.57□□□□□ -1.52
GTF3A-208ENST00000493903 FAM204AQ9H8W3 233 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 PPCSQ9HAB8 311 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 SMURF1Q9HCE7 757 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 PLCB1Q9NQ66 1216 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 TOMM22Q9NS69 142 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 PPARGC1AQ9UBK2 798 aaKnown RBP5.57□□□□□ -1.52
GTF3A-208ENST00000493903 FAM50BQ9Y247 325 aa5.57□□□□□ -1.52
GTF3A-208ENST00000493903 NPHP1O15259 732 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 NPHS1O60500 1241 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 HIP1RO75146 1068 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 LEFTY1O75610 366 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 KRT37O76014 449 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 AMY2AP04746 511 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 SYPP08247 313 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 SLC9A1P19634 815 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 AMY2BP19961 511 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 SERPINB3P29508 390 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 ADMP35318 185 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 JAM2P57087 298 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 HABP4Q5JVS0 413 aaKnown RBP5.56□□□□□ -1.52
GTF3A-208ENST00000493903 MBLAC2Q68D91 279 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 SLC51AQ86UW1 340 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 TSPYL5Q86VY4 417 aaPredicted RBP5.56□□□□□ -1.52
GTF3A-208ENST00000493903 OSTM1Q86WC4 334 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 CMIPQ8IY22 773 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 Q8N1Y9 231 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 MIER2Q8N344 545 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 USHBP1Q8N6Y0 703 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 SHKBP1Q8TBC3 707 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 JADE3Q92613 823 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 CHAMP1Q96JM3 812 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 HERPUD2Q9BSE4 406 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.56□□□□□ -1.52
GTF3A-208ENST00000493903 ZNF277Q9NRM2 450 aaPredicted RBP5.56□□□□□ -1.52
GTF3A-208ENST00000493903 CLDND1Q9NY35 253 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 USP36Q9P275 1121 aaKnown RBP5.56□□□□□ -1.52
GTF3A-208ENST00000493903 PNMA2Q9UL42 364 aa5.56□□□□□ -1.52
GTF3A-208ENST00000493903 DNM3Q9UQ16 869 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms