RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 SHTN1A0MZ66 631 aa15.47■□□□□ 0.07
ZIC4-215ENST00000493664 RAD21O60216 631 aa15.47■□□□□ 0.07
ZIC4-215ENST00000493664 STAT3P40763 770 aa15.47■□□□□ 0.07
ZIC4-215ENST00000493664 SLC18A3Q16572 532 aa15.47■□□□□ 0.07
ZIC4-215ENST00000493664 SCFD1Q8WVM8 642 aa15.47■□□□□ 0.07
ZIC4-215ENST00000493664 EP400Q96L91 3159 aa15.47■□□□□ 0.07
ZIC4-215ENST00000493664 KCTD1Q719H9 257 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 TRIM59Q8IWR1 403 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 IQCKQ8N0W5 287 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 PROM2Q8N271 834 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 PIK3R5Q8WYR1 880 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 RNPC3Q96LT9 517 aaKnown RBP15.46■□□□□ 0.07
ZIC4-215ENST00000493664 RTCBQ9Y3I0 505 aaKnown RBP15.46■□□□□ 0.07
ZIC4-215ENST00000493664 GRID2IPA4D2P6 1211 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 USP17L15C9J2P7 530 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 USP17L13C9JLJ4 530 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 USP17L11C9JVI0 530 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 USP17L18D6R9N7 530 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 USP17L22D6RA61 530 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 USP17L17D6RBQ6 530 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 USP17L19D6RCP7 530 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 USP17L20D6RJB6 530 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 RAD51CO43502 376 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 EPB41P11171 864 aaKnown RBP15.46■□□□□ 0.07
ZIC4-215ENST00000493664 SMARCA1P28370 1054 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 EPS15P42566 896 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 USP17L24Q0WX57 530 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 ORC2Q13416 577 aaPredicted RBP15.46■□□□□ 0.07
ZIC4-215ENST00000493664 ADAM9Q13443 819 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 MEI1Q5TIA1 1274 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 USP17L6PQ6QN14 398 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 RUBCNQ92622 972 aa15.46■□□□□ 0.07
ZIC4-215ENST00000493664 A0A087WUV0 522 aaPredicted RBP15.45■□□□□ 0.06
ZIC4-215ENST00000493664 USP17L10C9JJH3 530 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 NDUFAB1O14561 156 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 KCNK3O14649 394 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 CASP5P51878 434 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 GBP6Q6ZN66 633 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 GPBP1Q86WP2 473 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 KAT2BQ92831 832 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 INPP4AQ96PE3 977 aaPredicted RBP15.45■□□□□ 0.06
ZIC4-215ENST00000493664 EDEM3Q9BZQ6 932 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 EFCC1Q9HA90 598 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 BMP2KQ9NSY1 1161 aaPredicted RBP15.45■□□□□ 0.06
ZIC4-215ENST00000493664 PLA2G4BP0C869 781 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 SLC9A1P19634 815 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 TNFRSF8P28908 595 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 GLE1Q53GS7 698 aaKnown RBP15.45■□□□□ 0.06
ZIC4-215ENST00000493664 CENPHQ9H3R5 247 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 EMILIN3Q9NT22 766 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 TSKSQ9UJT2 592 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 PTK2Q05397 1052 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 KCNH2Q12809 1159 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 PAK2Q13177 524 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 DDX42Q86XP3 938 aaKnown RBP eCLIP15.45■□□□□ 0.06
ZIC4-215ENST00000493664 PCDHGC5Q9Y5F6 944 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 PCDHA2Q9Y5H9 948 aa15.45■□□□□ 0.06
ZIC4-215ENST00000493664 ERLIN2O94905 339 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 KRT18P05783 430 aaKnown RBP15.44■□□□□ 0.06
ZIC4-215ENST00000493664 ASIC2Q16515 512 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 ASPRV1Q53RT3 343 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 PPP4R3AQ6IN85 833 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 AP1M1Q9BXS5 423 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 LRRC27Q9C0I9 530 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 BCAS3Q9H6U6 928 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 CCNL1Q9UK58 526 aaPredicted RBP15.44■□□□□ 0.06
ZIC4-215ENST00000493664 PNMA6FA0A0J9YX94 578 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 POTEFA5A3E0 1075 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 POTEIP0CG38 1075 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 SKOR1P84550 965 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 HLTFQ14527 1009 aaKnown RBP eCLIP15.44■□□□□ 0.06
ZIC4-215ENST00000493664 FBXW10Q5XX13 1052 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 POTEGQ6S5H5 508 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 POTEEQ6S8J3 1075 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 MAATS1Q7Z4T9 603 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 KCTD10Q9H3F6 313 aa15.44■□□□□ 0.06
ZIC4-215ENST00000493664 MEIS1O00470 390 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 NR2F2P24468 414 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 NOVP48745 357 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 SEC24CP53992 1094 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 CCDC65Q8IXS2 484 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 CNBD1Q8NA66 436 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 OR2W6PQ8NHA6 318 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 SYN2Q92777 582 aaPredicted RBP15.43■□□□□ 0.06
ZIC4-215ENST00000493664 CUL5Q93034 780 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 GANQ9H2C0 597 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 PSTPIP2Q9H939 334 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 LUC7LQ9NQ29 371 aaKnown RBP15.43■□□□□ 0.06
ZIC4-215ENST00000493664 MPHOSPH10O00566 681 aaKnown RBP15.43■□□□□ 0.06
ZIC4-215ENST00000493664 CYP11B2P19099 503 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 RFC4P35249 363 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 ZNF543Q08ER8 600 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 CDC37Q16543 378 aaPredicted RBP15.43■□□□□ 0.06
ZIC4-215ENST00000493664 BARGINQ6ZT62 677 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 ZNF571Q7Z3V5 609 aaPredicted RBP15.43■□□□□ 0.06
ZIC4-215ENST00000493664 USP38Q8NB14 1042 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 FAM107BQ9H098 131 aa15.43■□□□□ 0.06
ZIC4-215ENST00000493664 NUCKS1Q9H1E3 243 aaKnown RBP15.43■□□□□ 0.06
ZIC4-215ENST00000493664 DDX4Q9NQI0 724 aaKnown RBP15.43■□□□□ 0.06
ZIC4-215ENST00000493664 MED24O75448 989 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms