RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 PPP4R3AQ6IN85 833 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 MOXD1Q6UVY6 613 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 ADGRF4Q8IZF3 695 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 LRRC47Q8N1G4 583 aaKnown RBP11.28□□□□□ -0.6
PRPF3-206ENST00000493553 KCTD17Q8N5Z5 321 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 C4orf32Q8N8J7 132 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 ACDQ96AP0 544 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 DHX58Q96C10 678 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 CALML4Q96GE6 196 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 ABHD17AQ96GS6 310 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 PAGE5Q96GU1 130 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 CTAGE1Q96RT6 745 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 ZCCHC2Q9C0B9 1178 aaKnown RBP11.28□□□□□ -0.6
PRPF3-206ENST00000493553 TAOK3Q9H2K8 898 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 TDRD3Q9H7E2 651 aaKnown RBP11.28□□□□□ -0.6
PRPF3-206ENST00000493553 PSTPIP2Q9H939 334 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 JMJD4Q9H9V9 463 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRPF3-206ENST00000493553 VAT1LQ9HCJ6 419 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 ZNF70Q9UC06 446 aaPredicted RBP11.28□□□□□ -0.6
PRPF3-206ENST00000493553 MTMR7Q9Y216 660 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 PCDHGC4Q9Y5F7 938 aa11.28□□□□□ -0.6
PRPF3-206ENST00000493553 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRPF3-206ENST00000493553 DDTLA6NHG4 134 aaPredicted RBP11.27□□□□□ -0.61
PRPF3-206ENST00000493553 PLA2G6O60733 806 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 BCRP11274 1271 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 EEF2P13639 858 aaKnown RBP11.27□□□□□ -0.61
PRPF3-206ENST00000493553 USP11P51784 963 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 TCP10Q12799 353 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 SLC35G1Q2M3R5 365 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 RRAGBQ5VZM2 374 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 CIAPIN1Q6FI81 312 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 BTNL9Q6UXG8 535 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 PDILTQ8N807 584 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 CHURC1Q8WUH1 139 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 ZIC5Q96T25 663 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 AMNQ9BXJ7 453 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 UBA5Q9GZZ9 404 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 KCNQ5Q9NR82 932 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 MAN1B1Q9UKM7 699 aa11.27□□□□□ -0.61
PRPF3-206ENST00000493553 SERTM1A2A2V5 107 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 YDJCA8MPS7 323 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 PSMD14O00487 310 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 CCP110O43303 1012 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 CCNT1O60563 726 aaKnown RBP11.26□□□□□ -0.61
PRPF3-206ENST00000493553 TUBB4AP04350 444 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 BMP3P12645 472 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 KCNA3P22001 575 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 DPYDQ12882 1025 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 KCNB1Q14721 858 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 CALCRLQ16602 461 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 LETM2Q2VYF4 491 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 TBCELQ5QJ74 424 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 FAM160B2Q86V87 743 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 CCDC112Q8NEF3 446 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 TBCKQ8TEA7 893 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 EPSTI1Q96J88 318 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 PRMT6Q96LA8 375 aaPredicted RBP11.26□□□□□ -0.61
PRPF3-206ENST00000493553 TSPAN10Q9H1Z9 355 aaPredicted RBP11.26□□□□□ -0.61
PRPF3-206ENST00000493553 EHMT1Q9H9B1 1298 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 DISC1Q9NRI5 854 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 ENAMQ9NRM1 1142 aa11.26□□□□□ -0.61
PRPF3-206ENST00000493553 GPC6Q9Y625 555 aaPredicted RBP11.26□□□□□ -0.61
PRPF3-206ENST00000493553 FRMPD2Q68DX3 1309 aaPredicted RBP11.26□□□□□ -0.61
PRPF3-206ENST00000493553 SFI1A8K8P3 1242 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 F5H6K3 240 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 EML1O00423 815 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 TBX3O15119 743 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 ATXN7O15265 892 aaPredicted RBP11.25□□□□□ -0.61
PRPF3-206ENST00000493553 MARCH6O60337 910 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 SERPINC1P01008 464 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 ASNSP08243 561 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 CDK11BP21127 795 aaKnown RBP11.25□□□□□ -0.61
PRPF3-206ENST00000493553 FGFR3P22607 806 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 LMOD1P29536 600 aaPredicted RBP11.25□□□□□ -0.61
PRPF3-206ENST00000493553 KCNJ6P48051 423 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 HIRAP54198 1017 aaPredicted RBP11.25□□□□□ -0.61
PRPF3-206ENST00000493553 SEC13P55735 322 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 PSMA6P60900 246 aaKnown RBP11.25□□□□□ -0.61
PRPF3-206ENST00000493553 FANCCQ00597 558 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 GRIN1Q05586 938 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 KLRC3Q07444 240 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 NCAPHQ15003 741 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 SEPT2Q15019 361 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 FILIP1LQ4L180 1135 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 SPECC1Q5M775 1068 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 SYDE2Q5VT97 1194 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 SPATA1Q5VX52 437 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 CCDC186Q7Z3E2 898 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 DEFB132Q7Z7B7 95 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 FBXO11Q86XK2 927 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 SLFN12Q8IYM2 578 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 SPC24Q8NBT2 197 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 TSEN2Q8NCE0 465 aaKnown RBP11.25□□□□□ -0.61
PRPF3-206ENST00000493553 NOC3LQ8WTT2 800 aaKnown RBP11.25□□□□□ -0.61
PRPF3-206ENST00000493553 DPF2Q92785 391 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 CDK5RAP3Q96JB5 506 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 DNAJC18Q9H819 358 aa11.25□□□□□ -0.61
PRPF3-206ENST00000493553 ZNF277Q9NRM2 450 aaPredicted RBP11.25□□□□□ -0.61
PRPF3-206ENST00000493553 SPTLC3Q9NUV7 552 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms