RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 DNAH14Q0VDD8 3507 aa7.81□□□□□ -1.16
VPS52-219ENST00000493379 FRMPD2Q68DX3 1309 aaPredicted RBP7.8□□□□□ -1.16
VPS52-219ENST00000493379 USP24Q9UPU5 2620 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 CACNA1HO95180 2353 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 CCDC69A6NI79 296 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 GRXCR1A8MXD5 290 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 ZBTB5O15062 677 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 GOLGA8HP0CJ92 632 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 FCER1AP12319 257 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 CASTP20810 708 aaKnown RBP7.8□□□□□ -1.16
VPS52-219ENST00000493379 VARSP26640 1264 aaKnown RBP7.8□□□□□ -1.16
VPS52-219ENST00000493379 GGCXP38435 758 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 RGS2P41220 211 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 ID4P47928 161 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 TRAF1Q13077 416 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 ACAP1Q15027 740 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 NTRK3Q16288 839 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 AAK1Q2M2I8 961 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 SNRNP48Q6IEG0 339 aaKnown RBP7.8□□□□□ -1.16
VPS52-219ENST00000493379 Q6ZUG5 572 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 SRBD1Q8N5C6 995 aaKnown RBP7.8□□□□□ -1.16
VPS52-219ENST00000493379 FAM133AQ8N9E0 248 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 TPCN2Q8NHX9 752 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 MORC4Q8TE76 937 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 FGD4Q96M96 766 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 BACH2Q9BYV9 841 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 RAVER2Q9HCJ3 691 aaKnown RBP7.8□□□□□ -1.16
VPS52-219ENST00000493379 NRBP1Q9UHY1 535 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 MAP4K5Q9Y4K4 846 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 CYP46A1Q9Y6A2 500 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 ZNF292O60281 2723 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 BRWD1Q9NSI6 2320 aa7.8□□□□□ -1.16
VPS52-219ENST00000493379 FLNBO75369 2602 aaKnown RBP7.8□□□□□ -1.16
VPS52-219ENST00000493379 COL4A6Q14031 1691 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 PLXNA3P51805 1871 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 DMDP11532 3685 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 MAST4O15021 2626 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 PNMA6FA0A0J9YX94 578 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 OPLAHO14841 1288 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 PPP1R11O60927 126 aaPredicted RBP7.79□□□□□ -1.16
VPS52-219ENST00000493379 CPA1P15085 419 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 ADORA2AP29274 412 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 PDIA3P30101 505 aaKnown RBP7.79□□□□□ -1.16
VPS52-219ENST00000493379 CCDC96Q2M329 555 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 QRICH1Q2TAL8 776 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 HFE2Q6ZVN8 426 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 TMTC3Q6ZXV5 915 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 CTCFLQ8NI51 663 aaPredicted RBP7.79□□□□□ -1.16
VPS52-219ENST00000493379 NPLOC4Q8TAT6 608 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 BRF1Q92994 677 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 TCEANC2Q96MN5 208 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 TRERF1Q96PN7 1200 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 APBA2Q99767 749 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 LRRC2Q9BYS8 371 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 SENP6Q9GZR1 1112 aaPredicted RBP7.79□□□□□ -1.16
VPS52-219ENST00000493379 ACAD9Q9H845 621 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 PRDM5Q9NQX1 630 aaPredicted RBP7.79□□□□□ -1.16
VPS52-219ENST00000493379 RBM28Q9NW13 759 aaKnown RBP7.79□□□□□ -1.16
VPS52-219ENST00000493379 SLC5A4Q9NY91 659 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 CYP39A1Q9NYL5 469 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 PRKAG2Q9UGJ0 569 aa7.79□□□□□ -1.16
VPS52-219ENST00000493379 ABCB11O95342 1321 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 CCDC196A0A1B0GTZ2 297 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 SFI1A8K8P3 1242 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 ZBTB43O43298 467 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 HMGCRP04035 888 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 IFNAR1P17181 557 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 CDC27P30260 824 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 RPIAP49247 311 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 HSD17B4P51659 736 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 PLS1Q14651 629 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 ANKRD1Q15327 319 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 CDC37Q16543 378 aaPredicted RBP7.78□□□□□ -1.16
VPS52-219ENST00000493379 MUM1L1Q5H9M0 696 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 INTS6LQ5JSJ4 861 aaKnown RBP7.78□□□□□ -1.16
VPS52-219ENST00000493379 SYNE3Q6ZMZ3 975 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 NFXL1Q6ZNB6 911 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 VASH1Q7L8A9 365 aaPredicted RBP7.78□□□□□ -1.16
VPS52-219ENST00000493379 NCAPG2Q86XI2 1143 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 CPXCR1Q8N123 301 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 FAM177A1Q8N128 213 aaPredicted RBP7.78□□□□□ -1.16
VPS52-219ENST00000493379 C1orf216Q8TAB5 229 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 TRIB2Q92519 343 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 MAML3Q96JK9 1138 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 MYL10Q9BUA6 226 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 AMNQ9BXJ7 453 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 C22orf23Q9BZE7 217 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 CPVLQ9H3G5 476 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 A1CFQ9NQ94 594 aaKnown RBP7.78□□□□□ -1.16
VPS52-219ENST00000493379 PDRG1Q9NUG6 133 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 FLRT1Q9NZU1 646 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 CCPG1Q9ULG6 757 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 RBM19Q9Y4C8 960 aaKnown RBP7.78□□□□□ -1.16
VPS52-219ENST00000493379 WDR87Q6ZQQ6 2873 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 PLXNB2O15031 1838 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 ZNF236Q9UL36 1845 aa7.78□□□□□ -1.16
VPS52-219ENST00000493379 DMXL1Q9Y485 3027 aa7.77□□□□□ -1.17
VPS52-219ENST00000493379 FAM208BQ5VWN6 2430 aa7.77□□□□□ -1.17
VPS52-219ENST00000493379 GVINP1Q7Z2Y8 2422 aa7.77□□□□□ -1.17
VPS52-219ENST00000493379 KLF18A0A0U1RQI7 1052 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms