RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 CLP1Q92989 425 aaKnown RBP12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 MFSD14AQ96MC6 490 aa12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 RWDD1Q9H446 243 aaPredicted RBP12.71□□□□□ -0.37
SNRNP200-207ENST00000493271 BMPR1AP36894 532 aa12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 MRPS9P82933 396 aaKnown RBP12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 ARHGAP4P98171 946 aa12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 PKN1Q16512 942 aa12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 NAALADL2Q58DX5 795 aa12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 CYFIP1Q7L576 1253 aa12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 NLRX1Q86UT6 975 aa12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 PLEKHM2Q8IWE5 1019 aa12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 LMBR1Q8WVP7 490 aa12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 CDHR1Q96JP9 859 aa12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 PIGSQ96S52 555 aa12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 EHMT1Q9H9B1 1298 aa12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 SETD4Q9NVD3 440 aa12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 NLRC5Q86WI3 1866 aa12.7□□□□□ -0.38
SNRNP200-207ENST00000493271 SORBS3O60504 671 aa12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 MMP1P03956 469 aa12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 MRE11P49959 708 aa12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 NHLH1Q02575 133 aa12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 SMAD4Q13485 552 aaKnown RBP12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 HERC4Q5GLZ8 1057 aaPredicted RBP12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 PCNX4Q63HM2 1172 aa12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 GPKOWQ92917 476 aaPredicted RBP eCLIP12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 TNPO1Q92973 898 aaKnown RBP12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 CUL5Q93034 780 aa12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 P2RX5Q93086 422 aa12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 PRRX2Q99811 253 aa12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 RC3H2Q9HBD1 1191 aaKnown RBP12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 SQORQ9Y6N5 450 aa12.69□□□□□ -0.38
SNRNP200-207ENST00000493271 PIK3CDO00329 1044 aa12.68□□□□□ -0.38
SNRNP200-207ENST00000493271 MBTPS2O43462 519 aa12.68□□□□□ -0.38
SNRNP200-207ENST00000493271 SMARCA1P28370 1054 aa12.68□□□□□ -0.38
SNRNP200-207ENST00000493271 IRS1P35568 1242 aa12.68□□□□□ -0.38
SNRNP200-207ENST00000493271 LTBRP36941 435 aa12.68□□□□□ -0.38
SNRNP200-207ENST00000493271 NUCB1Q02818 461 aa12.68□□□□□ -0.38
SNRNP200-207ENST00000493271 BTG3Q14201 252 aaPredicted RBP12.68□□□□□ -0.38
SNRNP200-207ENST00000493271 ZNF689Q96CS4 500 aaPredicted RBP12.68□□□□□ -0.38
SNRNP200-207ENST00000493271 FBXL18Q96ME1 805 aa12.68□□□□□ -0.38
SNRNP200-207ENST00000493271 MAP3K14Q99558 947 aa12.68□□□□□ -0.38
SNRNP200-207ENST00000493271 FTHL17Q9BXU8 183 aa12.68□□□□□ -0.38
SNRNP200-207ENST00000493271 ERAP1Q9NZ08 941 aa12.68□□□□□ -0.38
SNRNP200-207ENST00000493271 U3KPZ7 1027 aaPredicted RBP12.68□□□□□ -0.38
SNRNP200-207ENST00000493271 FSD2A1L4K1 749 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 IFIT3O14879 490 aaKnown RBP12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 GRM6O15303 877 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 CYTH3O43739 400 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 CHRNA1P02708 482 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 LINC00271P0C7V0 271 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 GHRP10912 638 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 TCF7P36402 384 aaPredicted RBP12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 MGAT3Q09327 533 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 HYAL1Q12794 435 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 TROAPQ12815 778 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 PPFIA1Q13136 1202 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 SEMA3FQ13275 785 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 WTAPQ15007 396 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 UTP14CQ5TAP6 766 aaKnown RBP12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 TSHZ1Q6ZSZ6 1077 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 CYB5R4Q7L1T6 521 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 BMP8AQ7Z5Y6 402 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 CATIPQ7Z7H3 387 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 RALYLQ86SE5 291 aaKnown RBP12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 SMARCC2Q8TAQ2 1214 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 GPRASP2Q96D09 838 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 RNF216Q9NWF9 866 aaPredicted RBP12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 CD207Q9UJ71 328 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 TUBE1Q9UJT0 475 aa12.67□□□□□ -0.38
SNRNP200-207ENST00000493271 MBLAC1A4D2B0 266 aaPredicted RBP12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 ENPP3O14638 875 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 MAFGO15525 162 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 DGKIO75912 1065 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 EYA4O95677 639 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 KIF5BP33176 963 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 LPIN1Q14693 890 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 IER5Q5VY09 327 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 B4GALNT3Q6L9W6 998 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 TRIM50Q86XT4 487 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 CMTR2Q8IYT2 770 aaKnown RBP12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 NCOA7Q8NI08 942 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 RUFY2Q8WXA3 655 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 SEPT1Q8WYJ6 367 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 LZTS2Q9BRK4 669 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 SPZ1Q9BXG8 430 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 SMARCAD1Q9H4L7 1026 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 BCAS3Q9H6U6 928 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 RTEL1Q9NZ71 1219 aa12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 SEC63Q9UGP8 760 aaKnown RBP12.66□□□□□ -0.38
SNRNP200-207ENST00000493271 RRN3P2A6NIE6 340 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 M0QZ92 97 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 STXBP3O00186 592 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 STAG3L1P0CL83 205 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 ADAM15Q13444 863 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 GRIK4Q16099 956 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 SLC35G1Q2M3R5 365 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 FBXO47Q5MNV8 452 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 HFE2Q6ZVN8 426 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 RNF135Q8IUD6 432 aa12.65□□□□□ -0.38
SNRNP200-207ENST00000493271 NPAS4Q8IUM7 802 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms