RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 GTPBP6O43824 516 aaPredicted RBP25.4■■□□□ 1.66
LYSMD4-208ENST00000493256 CAND2O75155 1236 aa25.4■■□□□ 1.66
LYSMD4-208ENST00000493256 CTSHP09668 335 aa25.4■■□□□ 1.66
LYSMD4-208ENST00000493256 ARHGAP4P98171 946 aa25.4■■□□□ 1.66
LYSMD4-208ENST00000493256 MTMR1Q13613 665 aa25.4■■□□□ 1.66
LYSMD4-208ENST00000493256 PLEKHG4Q58EX7 1191 aa25.4■■□□□ 1.66
LYSMD4-208ENST00000493256 KRT40Q6A162 431 aa25.4■■□□□ 1.66
LYSMD4-208ENST00000493256 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.4■■□□□ 1.66
LYSMD4-208ENST00000493256 LMBR1Q8WVP7 490 aa25.4■■□□□ 1.66
LYSMD4-208ENST00000493256 RAD9AQ99638 391 aa25.4■■□□□ 1.66
LYSMD4-208ENST00000493256 OSBPL7Q9BZF2 842 aa25.4■■□□□ 1.66
LYSMD4-208ENST00000493256 PKD2L1Q9P0L9 805 aa25.4■■□□□ 1.66
LYSMD4-208ENST00000493256 KAT6AQ92794 2004 aa25.4■■□□□ 1.66
LYSMD4-208ENST00000493256 COL4A4P53420 1690 aaPredicted RBP25.39■■□□□ 1.66
LYSMD4-208ENST00000493256 GSTTP1A0A1W2PQM5 241 aa25.39■■□□□ 1.66
LYSMD4-208ENST00000493256 NAPAP54920 295 aa25.39■■□□□ 1.66
LYSMD4-208ENST00000493256 MRPS5P82675 430 aaKnown RBP25.39■■□□□ 1.66
LYSMD4-208ENST00000493256 KRT32Q14532 448 aa25.39■■□□□ 1.66
LYSMD4-208ENST00000493256 FAM117BQ6P1L5 589 aa25.39■■□□□ 1.66
LYSMD4-208ENST00000493256 JADE2Q9NQC1 790 aa25.39■■□□□ 1.66
LYSMD4-208ENST00000493256 NCOR1O75376 2440 aa25.39■■□□□ 1.66
LYSMD4-208ENST00000493256 KLF18A0A0U1RQI7 1052 aa25.38■■□□□ 1.65
LYSMD4-208ENST00000493256 GOLGA8AA7E2F4 631 aa25.38■■□□□ 1.65
LYSMD4-208ENST00000493256 GOLGA8BA8MQT2 603 aa25.38■■□□□ 1.65
LYSMD4-208ENST00000493256 GRB10Q13322 594 aa25.38■■□□□ 1.65
LYSMD4-208ENST00000493256 PPP1R18Q6NYC8 613 aa25.38■■□□□ 1.65
LYSMD4-208ENST00000493256 SEPT1Q8WYJ6 367 aa25.38■■□□□ 1.65
LYSMD4-208ENST00000493256 EHMT1Q9H9B1 1298 aa25.38■■□□□ 1.65
LYSMD4-208ENST00000493256 RIC8AQ9NPQ8 531 aa25.38■■□□□ 1.65
LYSMD4-208ENST00000493256 FAM217BQ9NTX9 383 aaPredicted RBP25.38■■□□□ 1.65
LYSMD4-208ENST00000493256 V9GY48 417 aaPredicted RBP25.38■■□□□ 1.65
LYSMD4-208ENST00000493256 NRCAMQ92823 1304 aa25.37■■□□□ 1.65
LYSMD4-208ENST00000493256 LPXNO60711 386 aa25.37■■□□□ 1.65
LYSMD4-208ENST00000493256 TSPYL2Q9H2G4 693 aaPredicted RBP25.37■■□□□ 1.65
LYSMD4-208ENST00000493256 LINC01553A4QN01 128 aa25.36■■□□□ 1.65
LYSMD4-208ENST00000493256 STXBP3O00186 592 aa25.36■■□□□ 1.65
LYSMD4-208ENST00000493256 MAFGO15525 162 aa25.36■■□□□ 1.65
LYSMD4-208ENST00000493256 AMHP03971 560 aa25.36■■□□□ 1.65
LYSMD4-208ENST00000493256 MARK3P27448 753 aa25.36■■□□□ 1.65
LYSMD4-208ENST00000493256 CDC27P30260 824 aa25.36■■□□□ 1.65
LYSMD4-208ENST00000493256 MYOCDQ8IZQ8 938 aa25.36■■□□□ 1.65
LYSMD4-208ENST00000493256 SEPT8Q92599 483 aa25.36■■□□□ 1.65
LYSMD4-208ENST00000493256 PGBD1Q96JS3 809 aa25.36■■□□□ 1.65
LYSMD4-208ENST00000493256 MUC3AQ02505 3323 aa25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 HMGB1P09429 215 aaKnown RBP25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 CPA1P15085 419 aa25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 ADCY7P51828 1080 aa25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 PPFIA1Q13136 1202 aa25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 SKIV2LQ15477 1246 aaKnown RBP25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 FAM26DQ5JW98 314 aa25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 RUFY4Q6ZNE9 571 aa25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 CYP2W1Q8TAV3 490 aa25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 GDPD5Q8WTR4 605 aa25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 KCNB2Q92953 911 aa25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 MXRA8Q9BRK3 442 aa25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 ERAP1Q9NZ08 941 aa25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 MTUS1Q9ULD2 1270 aa25.35■■□□□ 1.65
LYSMD4-208ENST00000493256 XIRP2A4UGR9 3374 aa25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 hCG_1984214I3L0E3 225 aa25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 RCAN1P53805 252 aa25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 ERVK-21P61565 698 aa25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 TEX2Q8IWB9 1127 aa25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 ZNF713Q8N859 430 aaPredicted RBP25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 GLG1Q92896 1179 aa25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 TGS1Q96RS0 853 aaKnown RBP25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 ANO3Q9BYT9 981 aa25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 JPH1Q9HDC5 661 aaPredicted RBP25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 KCNH7Q9NS40 1196 aa25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 BARHL2Q9NY43 387 aa25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 NAP1L2Q9ULW6 460 aaPredicted RBP25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 INSL6Q9Y581 213 aa25.34■■□□□ 1.65
LYSMD4-208ENST00000493256 BDP1A6H8Y1 2624 aa25.33■■□□□ 1.65
LYSMD4-208ENST00000493256 SIP14410 1827 aa25.33■■□□□ 1.65
LYSMD4-208ENST00000493256 SMCO2A6NFE2 343 aa25.33■■□□□ 1.65
LYSMD4-208ENST00000493256 FOSP01100 380 aaPredicted RBP25.33■■□□□ 1.65
LYSMD4-208ENST00000493256 TFF2Q03403 129 aa25.33■■□□□ 1.65
LYSMD4-208ENST00000493256 GRIK4Q16099 956 aa25.33■■□□□ 1.65
LYSMD4-208ENST00000493256 RPAINQ86UA6 219 aa25.33■■□□□ 1.65
LYSMD4-208ENST00000493256 ADAMTS19Q8TE59 1207 aa25.33■■□□□ 1.65
LYSMD4-208ENST00000493256 PCYT2Q99447 389 aa25.33■■□□□ 1.65
LYSMD4-208ENST00000493256 SMARCAD1Q9H4L7 1026 aa25.33■■□□□ 1.65
LYSMD4-208ENST00000493256 ADD1P35611 737 aaKnown RBP25.32■■□□□ 1.64
LYSMD4-208ENST00000493256 HTRA4P83105 476 aaPredicted RBP25.32■■□□□ 1.64
LYSMD4-208ENST00000493256 FGD1P98174 961 aa25.32■■□□□ 1.64
LYSMD4-208ENST00000493256 TAF2Q6P1X5 1199 aa25.32■■□□□ 1.64
LYSMD4-208ENST00000493256 SUGCTQ9HAC7 445 aa25.32■■□□□ 1.64
LYSMD4-208ENST00000493256 TMEM260Q9NX78 707 aa25.32■■□□□ 1.64
LYSMD4-208ENST00000493256 SLC9A2Q9UBY0 812 aa25.32■■□□□ 1.64
LYSMD4-208ENST00000493256 TUBE1Q9UJT0 475 aa25.32■■□□□ 1.64
LYSMD4-208ENST00000493256 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 MBLAC1A4D2B0 266 aaPredicted RBP25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 TNFRSF10AO00220 468 aa25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 CHRNA1P02708 482 aa25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 ARP10275 920 aa25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 CLK2P49760 499 aaKnown RBP25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 METAP2P50579 478 aaKnown RBP eCLIP25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 APOBRQ0VD83 1088 aa25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 CEP55Q53EZ4 464 aa25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 MARCH8Q5T0T0 291 aa25.31■■□□□ 1.64
LYSMD4-208ENST00000493256 JAKMIP1Q96N16 626 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms