RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 OTUD5Q96G74 571 aa10.18□□□□□ -0.78
SMARCC1-208ENST00000492896 DYDC2Q96IM9 177 aa10.18□□□□□ -0.78
SMARCC1-208ENST00000492896 ZFP91Q96JP5 570 aaPredicted RBP10.18□□□□□ -0.78
SMARCC1-208ENST00000492896 PDCD2LQ9BRP1 358 aa10.18□□□□□ -0.78
SMARCC1-208ENST00000492896 AGO4Q9HCK5 861 aaKnown RBP10.18□□□□□ -0.78
SMARCC1-208ENST00000492896 ADD3Q9UEY8 706 aaKnown RBP10.18□□□□□ -0.78
SMARCC1-208ENST00000492896 MYH9P35579 1960 aaKnown RBP10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 ITIH6Q6UXX5 1313 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 FRMD3A2A2Y4 597 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 DDX39AO00148 427 aaKnown RBP10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 KIF20AO95235 890 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 IRX3P78415 501 aaPredicted RBP10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 MRPS9P82933 396 aaKnown RBP10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 CTTNQ14247 550 aaKnown RBP10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 PLS1Q14651 629 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 SPECC1LQ69YQ0 1117 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 ARMCX5Q6P1M9 558 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 FOXR2Q6PJQ5 311 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 MIER3Q7Z3K6 550 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 PNMA8AQ86V59 439 aaPredicted RBP10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 MYOCDQ8IZQ8 938 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 CSGALNACT2Q8N6G5 542 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 CCDC112Q8NEF3 446 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 CHST13Q8NET6 341 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 CLMNQ96JQ2 1002 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 TSG101Q99816 390 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 DUSP9Q99956 384 aaKnown RBP10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 HSD17B14Q9BPX1 270 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 SRRTQ9BXP5 876 aaKnown RBP10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 KCNH7Q9NS40 1196 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 SPTLC3Q9NUV7 552 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 TAB2Q9NYJ8 693 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 RGL1Q9NZL6 768 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 PKD2L1Q9P0L9 805 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 TCEAL9Q9UHQ7 104 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 KCNH4Q9UQ05 1017 aa10.17□□□□□ -0.78
SMARCC1-208ENST00000492896 ZNFX1Q9P2E3 1918 aaKnown RBP10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 NPHP3-ACAD11A0A0J9YXS1 232 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 IRF6O14896 467 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 N4BP3O15049 544 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 TEX33O43247 280 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 TBCAO75347 108 aaKnown RBP10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 FGFR1OPO95684 399 aaKnown RBP10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 TPM2P07951 284 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 SKILP12757 684 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 PBX1P40424 430 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 PSMC6P62333 389 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 LRRC63Q05C16 580 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 TBX2Q13207 712 aaPredicted RBP10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 ITGB3BPQ13352 177 aaPredicted RBP10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 NOLC1Q14978 699 aaKnown RBP eCLIP10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 ARSHQ5FYA8 562 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 ANKRD40Q6AI12 368 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 CENPPQ6IPU0 288 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 LBX2Q6XYB7 198 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 MOB2Q70IA6 237 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 ILDR2Q71H61 639 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 NLRX1Q86UT6 975 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 TPH2Q8IWU9 490 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 C17orf53Q8N3J3 647 aaPredicted RBP10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 NSUN6Q8TEA1 469 aaKnown RBP10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 GPRASP2Q96D09 838 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 LXNQ9BS40 222 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 BHMT2Q9H2M3 363 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 SEMA6BQ9H3T3 888 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 ZHX3Q9H4I2 956 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 A1CFQ9NQ94 594 aaKnown RBP10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 TBC1D22BQ9NU19 505 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 CYP39A1Q9NYL5 469 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 FBXO40Q9UH90 709 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 AGTPBP1Q9UPW5 1226 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 PLXNB2O15031 1838 aa10.16□□□□□ -0.78
SMARCC1-208ENST00000492896 TRPM7Q96QT4 1865 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 PFASO15067 1338 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 TESPA1A2RU30 521 aaPredicted RBP10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 LRRC10BA6NIK2 292 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 LGALS16A8MUM7 142 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 OFD1O75665 1012 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 STAM2O75886 525 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 SLITRK3O94933 977 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 NR3C2P08235 984 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 TPM1P09493 284 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 GAP43P17677 238 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 JAK3P52333 1124 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 CACNB1Q02641 598 aaPredicted RBP10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 GIT2Q14161 759 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 LRRC41Q15345 812 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 PTPN21Q16825 1174 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 HERC4Q5GLZ8 1057 aaPredicted RBP10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 IRF2BP1Q8IU81 584 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 RIOX2Q8IUF8 465 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 CREBRFQ8IUR6 639 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 OPTNQ96CV9 577 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 CNOT6LQ96LI5 555 aaKnown RBP10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 PURBQ96QR8 312 aaKnown RBP10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 NACC1Q96RE7 527 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 REEP2Q9BRK0 252 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 RUSC1Q9BVN2 902 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 VPS16Q9H269 839 aa10.15□□□□□ -0.78
SMARCC1-208ENST00000492896 PLXNA1Q9UIW2 1896 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms