RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 SASH3O75995 380 aa22.89■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 PAF1Q8N7H5 531 aa22.89■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 PLA2G12BQ9BX93 195 aa22.89■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 CCSER1Q9C0I3 900 aa22.89■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 LRRIQ3A6PVS8 624 aaPredicted RBP22.89■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 USP40Q9NVE5 1235 aa22.89■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 LARSQ9P2J5 1176 aaKnown RBP22.89■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 NPHP4O75161 1426 aaPredicted RBP22.89■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 RHOBTB3O94955 611 aa22.89■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 FCER1AP12319 257 aa22.89■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 PPP1R21Q6ZMI0 780 aa22.89■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 CCT8L2Q96SF2 557 aa22.89■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.89■■□□□ 1.256e-7■■□□□ 13.4
CHKB-CPT1B-203ENST00000492556 RAD54LQ92698 747 aa22.88■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 VCX3BQ9H321 246 aa22.88■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 IFNB1P01574 187 aa22.88■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 ILDR1Q86SU0 546 aaPredicted RBP22.88■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 CCDC89Q8N998 374 aa22.88■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 DDX47Q9H0S4 455 aaKnown RBP22.88■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 BACH1O14867 736 aa22.88■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 CYP2D6P10635 497 aa22.88■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 SGO2Q562F6 1265 aa22.88■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 ODR4Q5SWX8 454 aa22.88■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 FBXO11Q86XK2 927 aa22.88■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 SESN3P58005 492 aa22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 ORC2Q13416 577 aaPredicted RBP22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 SRBD1Q8N5C6 995 aaKnown RBP22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 RAB20Q9NX57 234 aa22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 PACSIN2Q9UNF0 486 aaPredicted RBP22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 PODXLO00592 558 aa22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 ZNF18P17022 549 aa22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 RAB21Q9UL25 225 aa22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 STRN3Q13033 797 aa22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 TAF11Q15544 211 aa22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 TRIM9Q9C026 710 aa22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 PDS5AQ29RF7 1337 aaKnown RBP22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 LRRN2O75325 713 aa22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 SNX24Q9Y343 169 aa22.87■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 PALM2Q8IXS6 379 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 FBXL16Q8N461 479 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 CHMP6Q96FZ7 201 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 ITSN1Q15811 1721 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 NUGGCQ68CJ6 796 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 DPH6Q7L8W6 267 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 OGFOD1Q8N543 542 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 SLITRK6Q9H5Y7 841 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 FBXL5Q9UKA1 691 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 LOC102724428A0A0B4J2F2 783 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 SIK1P57059 783 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 GRM4Q14833 912 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 PPP2R5AQ15172 486 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 BARHL2Q9NY43 387 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 CD44P16070 742 aaKnown RBP22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 LSP1P33241 339 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 TBX2Q13207 712 aaPredicted RBP22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 CAPN12Q6ZSI9 719 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 ZNF653Q96CK0 615 aa22.86■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 SSU72P8A0A1W2PR75 194 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 POTEMA6NI47 508 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 SP4Q02446 784 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 KCNH2Q12809 1159 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 MIER3Q7Z3K6 550 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 RHOT2Q8IXI1 618 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 STAG2Q8N3U4 1231 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 DCP1AQ9NPI6 582 aaPredicted RBP22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 ANAPC5Q9UJX4 755 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 COASYQ13057 564 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 CCNL1Q9UK58 526 aaPredicted RBP22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 TTLL1O95922 423 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 MFAP3P55082 362 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 GTF2IP78347 998 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 RBM12Q9NTZ6 932 aaKnown RBP22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 A0A1W2PQJ5 194 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 POC1B-GALNT4F8VUJ3 575 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 ORC4O43929 436 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 HARSP12081 509 aaKnown RBP22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 ADCY1Q08828 1119 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 LRIG3Q6UXM1 1119 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 KIFC2Q96AC6 838 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 MS4A14Q96JA4 679 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 ZIM3Q96PE6 472 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 BSDC1Q9NW68 430 aaPredicted RBP22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 TMEM51Q9NW97 253 aa22.85■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 DKC1O60832 514 aaKnown RBP eCLIP22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 SMIM24O75264 130 aa22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 LMNB2Q03252 620 aa22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 RNASELQ05823 741 aaKnown RBP22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 ERFEQ4G0M1 354 aa22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 TMED8Q6PL24 325 aaPredicted RBP22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 GIMAP8Q8ND71 665 aaPredicted RBP22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 EPB41L4AQ9HCS5 686 aaPredicted RBP22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 LOC102724159A0A0B4J2E5 919 aa22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 MYO1FO00160 1098 aa22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 MEIS1O00470 390 aa22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 ITIH3Q06033 890 aa22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 TCP10Q12799 353 aa22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 SNX1Q13596 522 aa22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 PWP2Q15269 919 aaKnown RBP22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 RBBP5Q15291 538 aaKnown RBP22.84■■□□□ 1.25
CHKB-CPT1B-203ENST00000492556 UBE2SQ16763 222 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms