RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 IFNAR1P17181 557 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 HOXC8P31273 242 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 TCF7P36402 384 aaPredicted RBP13.47□□□□□ -0.25
MDC1-207ENST00000492462 SREBF1P36956 1147 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 RABGGTBP53611 331 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 RBL2Q08999 1139 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 STK3Q13188 491 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 PTK7Q13308 1070 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 MBTPS1Q14703 1052 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 ZNF618Q5T7W0 954 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 LRRC8DQ7L1W4 858 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 CAGE1Q8TC20 777 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 AFAP1L1Q8TED9 768 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 CDHR1Q96JP9 859 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 RNF26Q9BY78 433 aaPredicted RBP13.47□□□□□ -0.25
MDC1-207ENST00000492462 ZMYND12Q9H0C1 365 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 RNPEPQ9H4A4 650 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 EHMT1Q9H9B1 1298 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 PDRG1Q9NUG6 133 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 SETD4Q9NVD3 440 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 VPS54Q9P1Q0 977 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 YBX2Q9Y2T7 364 aaKnown RBP13.47□□□□□ -0.25
MDC1-207ENST00000492462 CHD7Q9P2D1 2997 aa13.47□□□□□ -0.25
MDC1-207ENST00000492462 ESYT2A0FGR8 921 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 C17orf102A2RUQ5 167 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 TREHO43280 583 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 NBNO60934 754 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 SEC24BO95487 1268 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 MYOGP15173 224 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 RFC2P35250 354 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 ARHGAP4P98171 946 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 ITGB3BPQ13352 177 aaPredicted RBP13.46□□□□□ -0.25
MDC1-207ENST00000492462 AP3B2Q13367 1082 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 GRIN2CQ14957 1233 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 CEP55Q53EZ4 464 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 SERINC5Q86VE9 423 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 CCDC155Q8N6L0 562 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 GIMAP8Q8ND71 665 aaPredicted RBP13.46□□□□□ -0.25
MDC1-207ENST00000492462 CRYGNQ8WXF5 182 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 MYLIPQ8WY64 445 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 ATP6V0A1Q93050 837 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 TIFAQ96CG3 184 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 PCYT2Q99447 389 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 OSBPL7Q9BZF2 842 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 FTOQ9C0B1 505 aaKnown RBP eCLIP13.46□□□□□ -0.25
MDC1-207ENST00000492462 SLC4A7Q9Y6M7 1214 aa13.46□□□□□ -0.25
MDC1-207ENST00000492462 FAM86B1E9PN63 330 aa13.45□□□□□ -0.26
MDC1-207ENST00000492462 MEIS1O00470 390 aa13.45□□□□□ -0.26
MDC1-207ENST00000492462 EDIL3O43854 480 aa13.45□□□□□ -0.26
MDC1-207ENST00000492462 PFKMP08237 780 aa13.45□□□□□ -0.26
MDC1-207ENST00000492462 FAM86B2P0C5J1 330 aa13.45□□□□□ -0.26
MDC1-207ENST00000492462 MARK3P27448 753 aa13.45□□□□□ -0.26
MDC1-207ENST00000492462 AKAP17AQ02040 695 aaKnown RBP13.45□□□□□ -0.26
MDC1-207ENST00000492462 TEX2Q8IWB9 1127 aa13.45□□□□□ -0.26
MDC1-207ENST00000492462 REXO1Q8N1G1 1221 aaKnown RBP13.45□□□□□ -0.26
MDC1-207ENST00000492462 SEPT1Q8WYJ6 367 aa13.45□□□□□ -0.26
MDC1-207ENST00000492462 ZNF274Q96GC6 653 aaPredicted RBP13.45□□□□□ -0.26
MDC1-207ENST00000492462 AIFM3Q96NN9 605 aa13.45□□□□□ -0.26
MDC1-207ENST00000492462 GLT8D2Q9H1C3 349 aa13.45□□□□□ -0.26
MDC1-207ENST00000492462 MTIF3Q9H2K0 278 aaKnown RBP13.45□□□□□ -0.26
MDC1-207ENST00000492462 NKX2-4Q9H2Z4 354 aa13.45□□□□□ -0.26
MDC1-207ENST00000492462 ZNF576Q9H609 170 aa13.45□□□□□ -0.26
MDC1-207ENST00000492462 AGO4Q9HCK5 861 aaKnown RBP13.45□□□□□ -0.26
MDC1-207ENST00000492462 C6orf50Q9HD87 102 aa13.45□□□□□ -0.26
MDC1-207ENST00000492462 JPH1Q9HDC5 661 aaPredicted RBP13.45□□□□□ -0.26
MDC1-207ENST00000492462 IGLV3-22A0A075B6J6 115 aa13.44□□□□□ -0.26
MDC1-207ENST00000492462 MAFGO15525 162 aa13.44□□□□□ -0.26
MDC1-207ENST00000492462 THPOP40225 353 aa13.44□□□□□ -0.26
MDC1-207ENST00000492462 ADAM17P78536 824 aa13.44□□□□□ -0.26
MDC1-207ENST00000492462 TMCO2Q7Z6W1 182 aaPredicted RBP13.44□□□□□ -0.26
MDC1-207ENST00000492462 PLA2G4DQ86XP0 818 aa13.44□□□□□ -0.26
MDC1-207ENST00000492462 LMBR1Q8WVP7 490 aa13.44□□□□□ -0.26
MDC1-207ENST00000492462 SLC9A2Q9UBY0 812 aa13.44□□□□□ -0.26
MDC1-207ENST00000492462 ZNF215Q9UL58 517 aaPredicted RBP13.44□□□□□ -0.26
MDC1-207ENST00000492462 TPCN1Q9ULQ1 816 aa13.44□□□□□ -0.26
MDC1-207ENST00000492462 DDX39AO00148 427 aaKnown RBP13.43□□□□□ -0.26
MDC1-207ENST00000492462 CCNE2O96020 404 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 CXCL10P02778 98 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 CYP3A4P08684 503 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 CTSHP09668 335 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 ACTN1P12814 892 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 FOSL2P15408 326 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 ATP2A2P16615 1042 aaKnown RBP13.43□□□□□ -0.26
MDC1-207ENST00000492462 ZNF76P36508 570 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 ACTR2P61160 394 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 SSRP1Q08945 709 aaKnown RBP13.43□□□□□ -0.26
MDC1-207ENST00000492462 SCRN1Q12765 414 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 RUFY4Q6ZNE9 571 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 CCDC12Q8WUD4 166 aaPredicted RBP13.43□□□□□ -0.26
MDC1-207ENST00000492462 GLG1Q92896 1179 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 ZBTB10Q96DT7 871 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 MSRAQ9UJ68 235 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 HCN4Q9Y3Q4 1203 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 SIP14410 1827 aa13.43□□□□□ -0.26
MDC1-207ENST00000492462 NFASCO94856 1347 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 RSPH10B2B2RC85 870 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 CPLX1O14810 134 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 DHX15O43143 795 aaKnown RBP13.42□□□□□ -0.26
MDC1-207ENST00000492462 LGR5O75473 907 aa13.42□□□□□ -0.26
MDC1-207ENST00000492462 ARHGEF15O94989 841 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms