RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 VWA3BQ502W6 1294 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 ANO7Q6IWH7 933 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 PDXDC1Q6P996 788 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 CMTR1Q8N1G2 835 aaKnown RBP7.03□□□□□ -1.28
CCDC6-202ENST00000491922 FAM81AQ8TBF8 368 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 SHISA4Q96DD7 197 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 PGM2Q96G03 612 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 RAB3IPQ96QF0 476 aaPredicted RBP7.03□□□□□ -1.28
CCDC6-202ENST00000491922 SELENOSQ9BQE4 189 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 TRIM4Q9C037 500 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 NAPBQ9H115 298 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 SLITRK6Q9H5Y7 841 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 WDR35Q9P2L0 1181 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 O00370 1275 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 SNX3O60493 162 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 COQ9O75208 318 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 PPFIA2O75334 1257 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 SUN1O94901 812 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 OAS1P00973 400 aaKnown RBP7.03□□□□□ -1.28
CCDC6-202ENST00000491922 ATP6V1C1P21283 382 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 SKIV2L2P42285 1042 aaKnown RBP7.03□□□□□ -1.28
CCDC6-202ENST00000491922 DNA2P51530 1060 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 DHX9Q08211 1270 aaKnown RBP7.03□□□□□ -1.28
CCDC6-202ENST00000491922 RPS6KA1Q15418 735 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 PKN1Q16512 942 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 IL17AQ16552 155 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 SLC9C1Q4G0N8 1177 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 CCDC178Q5BJE1 867 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 ANKRD40Q6AI12 368 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 ANKRD23Q86SG2 305 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 DDX42Q86XP3 938 aaKnown RBP eCLIP7.03□□□□□ -1.28
CCDC6-202ENST00000491922 SEC14L1Q92503 715 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 BAP1Q92560 729 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 SYN2Q92777 582 aaPredicted RBP7.03□□□□□ -1.28
CCDC6-202ENST00000491922 EPAS1Q99814 870 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 PUS3Q9BZE2 481 aaKnown RBP7.03□□□□□ -1.28
CCDC6-202ENST00000491922 MMRN2Q9H8L6 949 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 MAGEF1Q9HAY2 307 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 FAM207AQ9NSI2 230 aaPredicted RBP7.03□□□□□ -1.28
CCDC6-202ENST00000491922 INTS9Q9NV88 658 aaKnown RBP7.03□□□□□ -1.28
CCDC6-202ENST00000491922 USP15Q9Y4E8 981 aaPredicted RBP7.03□□□□□ -1.28
CCDC6-202ENST00000491922 RPS6KL1Q9Y6S9 549 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 NUP188Q5SRE5 1749 aa7.03□□□□□ -1.28
CCDC6-202ENST00000491922 ZNF532Q9HCE3 1301 aa7.02□□□□□ -1.28
CCDC6-202ENST00000491922 CCDC169A6NNP5 214 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 PGRMC1O00264 195 aaKnown RBP7.02□□□□□ -1.29
CCDC6-202ENST00000491922 ZPR1O75312 459 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 FGFR1OPO95684 399 aaKnown RBP7.02□□□□□ -1.29
CCDC6-202ENST00000491922 SNRPA1P09661 255 aaKnown RBP7.02□□□□□ -1.29
CCDC6-202ENST00000491922 NUDT17P0C025 328 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 SETSIPP0DME0 302 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 PCK1P35558 622 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 RNASE9P60153 205 aaKnown RBP7.02□□□□□ -1.29
CCDC6-202ENST00000491922 MAN2A1Q16706 1144 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 LRRC23Q53EV4 343 aaPredicted RBP7.02□□□□□ -1.29
CCDC6-202ENST00000491922 TDRD12Q587J7 1177 aaKnown RBP7.02□□□□□ -1.29
CCDC6-202ENST00000491922 NUGGCQ68CJ6 796 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 ASRGL1Q7L266 308 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 TRIM74Q86UV6 250 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 TRIM73Q86UV7 250 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 DZIP3Q86Y13 1208 aaKnown RBP7.02□□□□□ -1.29
CCDC6-202ENST00000491922 IFNL3Q8IZI9 196 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 CNBD1Q8NA66 436 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 LRRC59Q96AG4 307 aaKnown RBP7.02□□□□□ -1.29
CCDC6-202ENST00000491922 ZNF512BQ96KM6 892 aaPredicted RBP7.02□□□□□ -1.29
CCDC6-202ENST00000491922 TRAPPC9Q96Q05 1148 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 STRBPQ96SI9 672 aaKnown RBP7.02□□□□□ -1.29
CCDC6-202ENST00000491922 TRIM7Q9C029 511 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 STMN4Q9H169 189 aaPredicted RBP7.02□□□□□ -1.29
CCDC6-202ENST00000491922 VCXQ9H320 206 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 STK38LQ9Y2H1 464 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 C2CD2Q9Y426 696 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 MYH4Q9Y623 1939 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 A8MUI8 341 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 BTNL10A8MVZ5 291 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 KCNK3O14649 394 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 EPHB6O15197 1021 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 DAPK3O43293 454 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 BAG3O95817 575 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 AGTP01019 485 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 SERPING1P05155 500 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 PYGLP06737 847 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 IMPDH2P12268 514 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 GNAZP19086 355 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 FLT3P36888 993 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 KLC1Q07866 573 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 SLC39A6Q13433 755 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 TSNAXIP1Q2TAA8 658 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 COBLL1Q53SF7 1204 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 PPP1R15BQ5SWA1 713 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 HGSNATQ68CP4 663 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 TRIM68Q6AZZ1 485 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 PI16Q6UXB8 463 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 RBM41Q96IZ5 413 aaKnown RBP7.02□□□□□ -1.29
CCDC6-202ENST00000491922 PRMT1Q99873 361 aaKnown RBP7.02□□□□□ -1.29
CCDC6-202ENST00000491922 TXLNGYQ9BZA5 131 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 ADAM7Q9H2U9 754 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 CUEDC2Q9H467 287 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 SLC52A2Q9HAB3 445 aa7.02□□□□□ -1.29
CCDC6-202ENST00000491922 ARHGEF10LQ9HCE6 1279 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms