RNA–Protein interactions for RNA: ENST00000491786.5

TTC7A-211, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 3,615 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-211ENST00000491786 CERKLQ49MI3 558 aaPredicted RBP12.86□□□□□ -0.35
TTC7A-211ENST00000491786 FAM26FQ5R3K3 315 aa12.86□□□□□ -0.35
TTC7A-211ENST00000491786 SLFN13Q68D06 897 aa12.86□□□□□ -0.35
TTC7A-211ENST00000491786 CCDC84Q86UT8 332 aaPredicted RBP12.86□□□□□ -0.35
TTC7A-211ENST00000491786 RPUSD2Q8IZ73 545 aaKnown RBP12.86□□□□□ -0.35
TTC7A-211ENST00000491786 CERS5Q8N5B7 392 aa12.86□□□□□ -0.35
TTC7A-211ENST00000491786 DNAJC7Q99615 494 aa12.86□□□□□ -0.35
TTC7A-211ENST00000491786 IFIH1Q9BYX4 1025 aaKnown RBP12.86□□□□□ -0.35
TTC7A-211ENST00000491786 NLRC4Q9NPP4 1024 aa12.86□□□□□ -0.35
TTC7A-211ENST00000491786 RIC8AQ9NPQ8 531 aa12.86□□□□□ -0.35
TTC7A-211ENST00000491786 PANK4Q9NVE7 773 aa12.86□□□□□ -0.35
TTC7A-211ENST00000491786 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.86□□□□□ -0.35
TTC7A-211ENST00000491786 ALDH1B1P30837 517 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 HOXA10P31260 410 aaPredicted RBP12.85□□□□□ -0.35
TTC7A-211ENST00000491786 TUBB4BP68371 445 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 VWA3BQ502W6 1294 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 SLC27A3Q5K4L6 730 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 CCDC181Q5TID7 509 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 GPBP1Q86WP2 473 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 CCDC65Q8IXS2 484 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 NUDT12Q9BQG2 462 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 CENPHQ9H3R5 247 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 PVALEFA0A1B0GWK0 134 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 TACC1O75410 805 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 MATR3P43243 847 aaKnown RBP eCLIP12.85□□□□□ -0.356e-6■■■■□ 21.9
TTC7A-211ENST00000491786 CRKP46108 304 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 RAB27AP51159 221 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 CKAP4Q07065 602 aaKnown RBP12.85□□□□□ -0.35
TTC7A-211ENST00000491786 MAN2A1Q16706 1144 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 DRAXINQ8NBI3 349 aaPredicted RBP12.85□□□□□ -0.35
TTC7A-211ENST00000491786 ZNF507Q8TCN5 953 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 PSMB7Q99436 277 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 SEMA6BQ9H3T3 888 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.85□□□□□ -0.352e-6■■■■■ 55.4
TTC7A-211ENST00000491786 ZNF232Q9UNY5 417 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 COL5A3P25940 1745 aaPredicted RBP12.85□□□□□ -0.35
TTC7A-211ENST00000491786 GDF11O95390 407 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 NPR1P16066 1061 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.35
TTC7A-211ENST00000491786 KRT26Q7Z3Y9 468 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 SMCR8Q8TEV9 937 aaPredicted RBP12.85□□□□□ -0.35
TTC7A-211ENST00000491786 PNMA5Q96PV4 448 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 CRACR2AQ9BSW2 395 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 BLOC1S4Q9NUP1 217 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 SAMM50Q9Y512 469 aa12.85□□□□□ -0.35
TTC7A-211ENST00000491786 SPDYE3A6NKU9 549 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 MMP10P09238 476 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 QRICH1Q2TAL8 776 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 PRR16Q569H4 304 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 ARMCX6Q7L4S7 300 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 KRT27Q7Z3Y8 459 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 NLGN1Q8N2Q7 840 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 CCDC17Q96LX7 622 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 NT5C3AQ9H0P0 336 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 CCDC88AQ3V6T2 1871 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 CASZ1Q86V15 1759 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 LRRIQ3A6PVS8 624 aaPredicted RBP12.84□□□□□ -0.35
TTC7A-211ENST00000491786 ATP1A1P05023 1023 aaKnown RBP12.84□□□□□ -0.35
TTC7A-211ENST00000491786 CCDC170Q8IYT3 715 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 GUF1Q8N442 669 aaKnown RBP12.84□□□□□ -0.35
TTC7A-211ENST00000491786 ANKRD13CQ8N6S4 541 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 ALS2CR12Q96Q35 445 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.84□□□□□ -0.35
TTC7A-211ENST00000491786 KDM4CQ9H3R0 1056 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 KLC4Q9NSK0 619 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 LMCD1Q9NZU5 365 aa12.84□□□□□ -0.35
TTC7A-211ENST00000491786 E9PMD0 336 aa12.83□□□□□ -0.35
TTC7A-211ENST00000491786 RPSAP08865 295 aaKnown RBP12.83□□□□□ -0.35
TTC7A-211ENST00000491786 EEF2P13639 858 aaKnown RBP12.83□□□□□ -0.35
TTC7A-211ENST00000491786 SHMT1P34896 483 aa12.83□□□□□ -0.35
TTC7A-211ENST00000491786 HERVK_113P62684 666 aa12.83□□□□□ -0.35
TTC7A-211ENST00000491786 PDIA5Q14554 519 aa12.83□□□□□ -0.35
TTC7A-211ENST00000491786 CDC37Q16543 378 aaPredicted RBP12.83□□□□□ -0.35
TTC7A-211ENST00000491786 CEP85LQ5SZL2 805 aa12.83□□□□□ -0.35
TTC7A-211ENST00000491786 CDCA2Q69YH5 1023 aaPredicted RBP12.83□□□□□ -0.35
TTC7A-211ENST00000491786 IQCEQ6IPM2 695 aa12.83□□□□□ -0.35
TTC7A-211ENST00000491786 PPP1R18Q6NYC8 613 aa12.83□□□□□ -0.35
TTC7A-211ENST00000491786 KCNK18Q7Z418 384 aa12.83□□□□□ -0.35
TTC7A-211ENST00000491786 MSL3Q8N5Y2 521 aaKnown RBP12.83□□□□□ -0.35
TTC7A-211ENST00000491786 NOA1Q8NC60 698 aaKnown RBP12.83□□□□□ -0.35
TTC7A-211ENST00000491786 MTMR9Q96QG7 549 aa12.83□□□□□ -0.35
TTC7A-211ENST00000491786 SUGT1Q9Y2Z0 365 aa12.83□□□□□ -0.35
TTC7A-211ENST00000491786 REXO2Q9Y3B8 237 aaKnown RBP12.83□□□□□ -0.35
TTC7A-211ENST00000491786 MAFGO15525 162 aa12.83□□□□□ -0.36
TTC7A-211ENST00000491786 EIF4A3P38919 411 aaKnown RBP12.83□□□□□ -0.36
TTC7A-211ENST00000491786 LRRC63Q05C16 580 aa12.83□□□□□ -0.36
TTC7A-211ENST00000491786 COASYQ13057 564 aa12.83□□□□□ -0.36
TTC7A-211ENST00000491786 TSGA10Q9BZW7 698 aa12.83□□□□□ -0.36
TTC7A-211ENST00000491786 KDM3AQ9Y4C1 1321 aa12.83□□□□□ -0.36
TTC7A-211ENST00000491786 POTEB3A0JP26 581 aa12.83□□□□□ -0.36
TTC7A-211ENST00000491786 POTECB2RU33 542 aa12.83□□□□□ -0.36
TTC7A-211ENST00000491786 SEPT2Q15019 361 aa12.83□□□□□ -0.36
TTC7A-211ENST00000491786 PDCD2Q16342 344 aaPredicted RBP12.83□□□□□ -0.36
TTC7A-211ENST00000491786 WDR59Q6PJI9 974 aa12.83□□□□□ -0.36
TTC7A-211ENST00000491786 POTEBQ6S5H4 581 aa12.83□□□□□ -0.36
TTC7A-211ENST00000491786 ERMNQ8TAM6 284 aa12.83□□□□□ -0.36
TTC7A-211ENST00000491786 BCAS4Q8TDM0 211 aa12.83□□□□□ -0.36
TTC7A-211ENST00000491786 NAP1L4Q99733 375 aaKnown RBP12.83□□□□□ -0.36
TTC7A-211ENST00000491786 ANO3Q9BYT9 981 aa12.83□□□□□ -0.36
TTC7A-211ENST00000491786 PPP1R12BO60237 982 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms